Initializing AMReX (25.06-16-ga438488bf272)...
MPI initialized with 4 MPI processes
MPI initialized with thread support level 0
OMP initialized with 4 OMP threads
AMReX (25.06-16-ga438488bf272) initialized
Calling Setup()
Calling ReadParameters()
reading extern runtime parameters ...
Calling VariableSetup()
Calling BCSetup()
Calling BaseStateGeometry::Init()
Calling Init()
Calling InitData()
initdata model_File = model.hse.cool.coulomb
model file = model.hse.cool.coulomb


reading initial model
640 points found in the initial model
6 variables found in the initial model
model file mapping, level: 0
dr of MAESTRO base state =                            562500.000000
dr of input file data =                               562500.000000

maximum radius (cell-centered) of input model =       359718750.000000
 
setting r_cutoff to 365
radius at r_cutoff 205593750

Maximum HSE Error = 0.000061
(after putting initial model into base state arrays, and
for density < base_cutoff_density)


Writing plotfile reacting_bubble-3d_pltInitData after InitData
inner sponge: r_sp      , r_tp      : 186468750, 224718750
Time to write plotfile: 1.47231421
inner sponge: r_sp      , r_tp      : 186468750, 224718750

Doing initial projection
Calling nodal solver
MLMG: Initial rhs               = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.017750288 Iter = 0 Bottom = 0
Done calling nodal solver

Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj
inner sponge: r_sp      , r_tp      : 186468750, 224718750
Time to write plotfile: 1.371373129
Call to firstdt for level 0 gives dt_lev = 0.0004741795139
Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139
Minimum firstdt over all levels = 0.0004741795139

Doing initial divu iteration #1
Calling nodal solver
MLMG: Initial rhs               = 2054.815795
MLMG: Initial residual (resid0) = 2054.815795
MLMG: Final Iter. 7 resid, resid/bnorm = 5.583462581e-10, 2.717256989e-13
MLMG: Timers: Solve = 0.817782841 Iter = 0.796254523 Bottom = 0.023634445
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.1719927642
Minimum estdt over all levels = 0.1719927642
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642
Multiplying dt by init_shrink; dt = 0.1719927642
Ignoring this new dt since it's larger than the previous dt = 0.0004741795139

Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter
inner sponge: r_sp      , r_tp      : 186468750, 224718750
Time to write plotfile: 1.384372079

Doing initial pressure iteration #1

Timestep 0 starts with TIME = 0 DT = 0.0004741795139

Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp      , r_tp      : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs               = 2728631.973
MLMG: Initial residual (resid0) = 2728631.973
MLMG: Final Iter. 9 resid, resid/bnorm = 1.565250568e-05, 5.736393121e-12
MLMG: Timers: Solve = 0.273835685 Iter = 0.256378529 Bottom = 0.045843118
<<< STEP 4 : advect base >>>
            :  density_advance >>>
            :   tracer_advance >>>
            : enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs               = 2728627.792
MLMG: Initial residual (resid0) = 8729.745164
MLMG: Final Iter. 5 resid, resid/bnorm = 0.0002251335536, 8.2507975e-11
MLMG: Timers: Solve = 0.166885681 Iter = 0.148097236 Bottom = 0.026043811
<<< STEP 8 : advect base >>>
            :  density_advance >>>
            :   tracer_advance >>>
            : enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs               = 1.157552615e+10
MLMG: Initial residual (resid0) = 1.157552615e+10
MLMG: Final Iter. 7 resid, resid/bnorm = 0.002669021285, 2.305745112e-13
MLMG: Timers: Solve = 0.803373509 Iter = 0.785142523 Bottom = 0.023907086
Done calling nodal solver

Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139
Timing summary:
Advection  :1.836848141 seconds
MAC Proj   :0.513069278 seconds
Nodal Proj :0.919235897 seconds
Reactions  :2.028903884 seconds
Misc       :0.448637562 seconds
Base State :0.002704762 seconds
Time to advance time step: 5.775393056

Writing plotfile 0 after all initialization
inner sponge: r_sp      , r_tp      : 186468750, 224718750
Time to write plotfile: 1.412186345

Beginning main evolution

Timestep 1 starts with TIME = 0 DT = 0.0004741795139

Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp      , r_tp      : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs               = 1308380.202
MLMG: Initial residual (resid0) = 1308380.202
MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001226427703, 9.37363391e-11
MLMG: Timers: Solve = 0.248051289 Iter = 0.230297414 Bottom = 0.042837801
<<< STEP 4 : advect base >>>
            :  density_advance >>>
            :   tracer_advance >>>
            : enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs               = 1308380.236
MLMG: Initial residual (resid0) = 0.982250484
MLMG: Final Iter. 4 resid, resid/bnorm = 3.543014827e-05, 2.707939733e-11
MLMG: Timers: Solve = 0.093096417 Iter = 0.080100534 Bottom = 0.014899926
<<< STEP 8 : advect base >>>
            :  density_advance >>>
            :   tracer_advance >>>
            : enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs               = 5488883.985
MLMG: Initial residual (resid0) = 5488883.985
MLMG: Final Iter. 7 resid, resid/bnorm = 1.276901457e-06, 2.326340766e-13
MLMG: Timers: Solve = 0.792492458 Iter = 0.776145141 Bottom = 0.018955936
Done calling nodal solver

Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139
Timing summary:
Advection  :1.578183074 seconds
MAC Proj   :0.40315493 seconds
Nodal Proj :0.888246211 seconds
Reactions  :1.975020559 seconds
Misc       :0.44613513 seconds
Base State :0.003568401 seconds
Time to advance time step: 5.358858042
Call to estdt for level 0 gives dt_lev = 0.2012294718
Minimum estdt over all levels = 0.2012294718
Call to estdt at beginning of step 2 gives dt =0.2012294718
dt_growth factor limits the new dt = 0.0005215974653

Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653

Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp      , r_tp      : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs               = 1426181.405
MLMG: Initial residual (resid0) = 1426181.405
MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001355668355, 9.505581478e-11
MLMG: Timers: Solve = 0.171487878 Iter = 0.158566902 Bottom = 0.029321561
<<< STEP 4 : advect base >>>
            :  density_advance >>>
            :   tracer_advance >>>
            : enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs               = 1426184.06
MLMG: Initial residual (resid0) = 5132.459653
MLMG: Final Iter. 6 resid, resid/bnorm = 3.069994636e-05, 2.152593569e-11
MLMG: Timers: Solve = 0.132853511 Iter = 0.119966295 Bottom = 0.023393227
<<< STEP 8 : advect base >>>
            :  density_advance >>>
            :   tracer_advance >>>
            : enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs               = 6063789.798
MLMG: Initial residual (resid0) = 6063789.798
MLMG: Final Iter. 7 resid, resid/bnorm = 1.456762325e-06, 2.402395817e-13
MLMG: Timers: Solve = 0.776573575 Iter = 0.760547462 Bottom = 0.016794724
Done calling nodal solver

Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653
Timing summary:
Advection  :1.469618506 seconds
MAC Proj   :0.356516952 seconds
Nodal Proj :0.875425765 seconds
Reactions  :1.920155765 seconds
Misc       :0.439661868 seconds
Base State :0.002470671 seconds
Time to advance time step: 5.083935087
Call to estdt for level 0 gives dt_lev = 0.20128497
Minimum estdt over all levels = 0.20128497
Call to estdt at beginning of step 3 gives dt =0.20128497
dt_growth factor limits the new dt = 0.0005737572118

Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118

Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp      , r_tp      : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs               = 1597942.993
MLMG: Initial residual (resid0) = 1597942.993
MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001512539166, 9.465538957e-11
MLMG: Timers: Solve = 0.177431458 Iter = 0.164680275 Bottom = 0.031121171
<<< STEP 4 : advect base >>>
            :  density_advance >>>
            :   tracer_advance >>>
            : enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs               = 1597945.914
MLMG: Initial residual (resid0) = 5863.170847
MLMG: Final Iter. 6 resid, resid/bnorm = 3.355396075e-05, 2.099818302e-11
MLMG: Timers: Solve = 0.134430921 Iter = 0.121449429 Bottom = 0.023355891
<<< STEP 8 : advect base >>>
            :  density_advance >>>
            :   tracer_advance >>>
            : enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs               = 6670310.291
MLMG: Initial residual (resid0) = 6670310.291
MLMG: Final Iter. 7 resid, resid/bnorm = 4.166027845e-06, 6.245628259e-13
MLMG: Timers: Solve = 0.807710631 Iter = 0.791519197 Bottom = 0.018846886
Done calling nodal solver

Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118
Timing summary:
Advection  :1.544668714 seconds
MAC Proj   :0.367698958 seconds
Nodal Proj :0.9041071 seconds
Reactions  :2.046882787 seconds
Misc       :0.450776288 seconds
Base State :0.003816005 seconds
Time to advance time step: 5.336838635

Writing plotfile 3
inner sponge: r_sp      , r_tp      : 186468750, 224718750
Time to write plotfile: 1.415396512

Total Time: 32.12484434
Unused ParmParse Variables:
  [TOP]::amr.check_file(nvals = 1)  :: [reacting_bubble-3d_chk]
  [TOP]::amr.checkpoint_files_output(nvals = 1)  :: [0]
  [TOP]::amr.ref_ratio(nvals = 4)  :: [2, 2, 2, 2]

AMReX (25.06-16-ga438488bf272) finalized