Initializing AMReX (26.01-3-g237386c753c2)... MPI initialized with 4 MPI processes MPI initialized with thread support level 0 AMReX (26.01-3-g237386c753c2) initialized Calling Setup() Calling ReadParameters() reading extern runtime parameters ... Calling VariableSetup() Calling BCSetup() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 1 dr of MAESTRO base state = 281250.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 729 radius at r_cutoff 205171875 Maximum HSE Error = 0.500936 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.106406303 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.005531026 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.124692709 Call to firstdt for level 0 gives dt_lev = 0.0004741795922 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922 Call to firstdt for level 1 gives dt_lev = 0.0002743178815 Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815 Minimum firstdt over all levels = 0.0002743178815 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 9701.860973 MLMG: Initial residual (resid0) = 9701.860973 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0003239456923, 3.339005715e-08 MLMG: Timers: Solve = 0.113931713 Iter = 0.108501867 Bottom = 0.000138013 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1641628699 Call to estdt for level 1 gives dt_lev = 0.1158500463 Minimum estdt over all levels = 0.1158500463 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500463 Multiplying dt by init_shrink; dt = 0.1158500463 Ignoring this new dt since it's larger than the previous dt = 0.0002743178815 Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.025739243 Doing initial pressure iteration #1  Timestep 0 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1769558.576 MLMG: Initial residual (resid0) = 1769558.576 MLMG: Final Iter. 7 resid, resid/bnorm = 0.001462311218, 8.263706199e-10 MLMG: Timers: Solve = 0.063578938 Iter = 0.057615571 Bottom = 0.000202297 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1769557.101 MLMG: Initial residual (resid0) = 12562.98069 MLMG: Final Iter. 4 resid, resid/bnorm = 0.0003393796997, 1.917879336e-10 MLMG: Timers: Solve = 0.03555648 Iter = 0.032816618 Bottom = 0.000108557 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.293088754e+10 MLMG: Initial residual (resid0) = 1.293088754e+10 MLMG: Final Iter. 9 resid, resid/bnorm = 0.05357837677, 4.143441554e-12 MLMG: Timers: Solve = 0.196019179 Iter = 0.192440461 Bottom = 0.000250204 Done calling nodal solver Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.346809399 seconds MAC Proj :0.110955616 seconds Nodal Proj :0.244461683 seconds Reactions :1.50683322 seconds Misc :0.264765159 seconds Base State :0.002096136 seconds Time to advance time step: 2.505231988 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.014441903 Writing checkpoint 0 after all initialization Writing checkpoint reacting_bubble_2d_chk0000000 Beginning main evolution  Timestep 1 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 484084.2371 MLMG: Initial residual (resid0) = 484084.2371 MLMG: Final Iter. 7 resid, resid/bnorm = 3.840937519e-05, 7.93444038e-11 MLMG: Timers: Solve = 0.060230966 Iter = 0.05745865 Bottom = 0.000206416 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 484084.2265 MLMG: Initial residual (resid0) = 15.74076829 MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002647708444, 5.469520177e-10 MLMG: Timers: Solve = 0.028190776 Iter = 0.02543305 Bottom = 9.0242e-05 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3547174.998 MLMG: Initial residual (resid0) = 3547174.998 MLMG: Final Iter. 9 resid, resid/bnorm = 1.47074461e-05, 4.14624204e-12 MLMG: Timers: Solve = 0.20321327 Iter = 0.199639734 Bottom = 0.000247729 Done calling nodal solver Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.323432471 seconds MAC Proj :0.098675436 seconds Nodal Proj :0.251041017 seconds Reactions :1.516966259 seconds Misc :0.242860429 seconds Base State :0.001406434 seconds Time to advance time step: 2.456127288 Call to estdt for level 0 gives dt_lev = 0.2285161774 Call to estdt for level 1 gives dt_lev = 0.1613599181 Minimum estdt over all levels = 0.1613599181 Call to estdt at beginning of step 2 gives dt =0.1613599181 dt_growth factor limits the new dt = 0.0003017496696  Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 709087.2083 MLMG: Initial residual (resid0) = 709087.2083 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005366309961, 7.567912518e-10 MLMG: Timers: Solve = 0.052819742 Iter = 0.049827724 Bottom = 0.000188164 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 709086.6226 MLMG: Initial residual (resid0) = 129230.7288 MLMG: Final Iter. 5 resid, resid/bnorm = 9.585552004e-05, 1.351816788e-10 MLMG: Timers: Solve = 0.044565148 Iter = 0.041769581 Bottom = 0.000143088 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3903892.245 MLMG: Initial residual (resid0) = 3903892.245 MLMG: Final Iter. 9 resid, resid/bnorm = 1.615658402e-05, 4.138583498e-12 MLMG: Timers: Solve = 0.203792894 Iter = 0.200221941 Bottom = 0.000259751 Done calling nodal solver Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696 Timing summary: Advection :0.362165937 seconds MAC Proj :0.10774922 seconds Nodal Proj :0.252677487 seconds Reactions :1.577882092 seconds Misc :0.251549207 seconds Base State :0.002179713 seconds Time to advance time step: 2.552571051 Time to regrid: 0.120312027 Call to estdt for level 0 gives dt_lev = 0.2285277611 Call to estdt for level 1 gives dt_lev = 0.161379943 Minimum estdt over all levels = 0.161379943 Call to estdt at beginning of step 3 gives dt =0.161379943 dt_growth factor limits the new dt = 0.0003319246366  Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003319246366 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1070293.273 MLMG: Initial residual (resid0) = 1070293.273 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005793993641, 5.413463571e-10 MLMG: Timers: Solve = 0.051950059 Iter = 0.049122567 Bottom = 0.000185239 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1070292.628 MLMG: Initial residual (resid0) = 47909.95947 MLMG: Final Iter. 5 resid, resid/bnorm = 0.000143692364, 1.342552123e-10 MLMG: Timers: Solve = 0.044653556 Iter = 0.041839293 Bottom = 0.00014251 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 4294280.633 MLMG: Initial residual (resid0) = 4294280.633 MLMG: Final Iter. 9 resid, resid/bnorm = 1.778220758e-05, 4.140904868e-12 MLMG: Timers: Solve = 0.206945381 Iter = 0.201992828 Bottom = 0.000245495 Done calling nodal solver Timestep 3 ends with TIME = 0.0009079921877 DT = 0.0003319246366 Timing summary: Advection :0.334492971 seconds MAC Proj :0.106947214 seconds Nodal Proj :0.265213375 seconds Reactions :1.542080738 seconds Misc :0.255472227 seconds Base State :0.001444608 seconds Time to advance time step: 2.504941634 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.053570476 Writing checkpoint 3 Writing checkpoint reacting_bubble_2d_chk0000003 Total Time: 17.70903582 Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] AMReX (26.01-3-g237386c753c2) finalized