Initializing AMReX (26.01-4-g2dc1f6ab47fa)... MPI initialized with 4 MPI processes MPI initialized with thread support level 0 AMReX (26.01-4-g2dc1f6ab47fa) initialized Calling Setup() Calling ReadParameters() reading extern runtime parameters ... Calling VariableSetup() Calling BCSetup() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 1 dr of MAESTRO base state = 281250.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 729 radius at r_cutoff 205171875 Maximum HSE Error = 0.500936 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.113532993 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.006444861 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.066939925 Call to firstdt for level 0 gives dt_lev = 0.0004741795922 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922 Call to firstdt for level 1 gives dt_lev = 0.0002743178815 Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815 Minimum firstdt over all levels = 0.0002743178815 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 9701.860973 MLMG: Initial residual (resid0) = 9701.860973 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0003239456923, 3.339005715e-08 MLMG: Timers: Solve = 0.117153864 Iter = 0.111527258 Bottom = 0.000139274 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1641628699 Call to estdt for level 1 gives dt_lev = 0.1158500463 Minimum estdt over all levels = 0.1158500463 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500463 Multiplying dt by init_shrink; dt = 0.1158500463 Ignoring this new dt since it's larger than the previous dt = 0.0002743178815 Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.052663047 Doing initial pressure iteration #1  Timestep 0 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1769558.576 MLMG: Initial residual (resid0) = 1769558.576 MLMG: Final Iter. 7 resid, resid/bnorm = 0.001462311218, 8.263706199e-10 MLMG: Timers: Solve = 0.066271807 Iter = 0.059571085 Bottom = 0.000226952 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1769557.101 MLMG: Initial residual (resid0) = 12562.98069 MLMG: Final Iter. 4 resid, resid/bnorm = 0.0003393796997, 1.917879336e-10 MLMG: Timers: Solve = 0.038616168 Iter = 0.034575403 Bottom = 0.000118545 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.293088754e+10 MLMG: Initial residual (resid0) = 1.293088754e+10 MLMG: Final Iter. 9 resid, resid/bnorm = 0.05357837677, 4.143441554e-12 MLMG: Timers: Solve = 0.204941521 Iter = 0.200855647 Bottom = 0.000261943 Done calling nodal solver Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.393449848 seconds MAC Proj :0.118792999 seconds Nodal Proj :0.25677923 seconds Reactions :1.564116412 seconds Misc :0.279938062 seconds Base State :0.001726694 seconds Time to advance time step: 2.640312163 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.050162214 Writing checkpoint 0 after all initialization Writing checkpoint reacting_bubble_2d_chk0000000 Beginning main evolution  Timestep 1 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 484084.2371 MLMG: Initial residual (resid0) = 484084.2371 MLMG: Final Iter. 7 resid, resid/bnorm = 3.840937519e-05, 7.93444038e-11 MLMG: Timers: Solve = 0.06715217 Iter = 0.063021407 Bottom = 0.000228273 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 484084.2265 MLMG: Initial residual (resid0) = 15.74076829 MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002647708444, 5.469520177e-10 MLMG: Timers: Solve = 0.031233722 Iter = 0.02714126 Bottom = 9.62e-05 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3547174.998 MLMG: Initial residual (resid0) = 3547174.998 MLMG: Final Iter. 9 resid, resid/bnorm = 1.47074461e-05, 4.14624204e-12 MLMG: Timers: Solve = 0.205980649 Iter = 0.201839029 Bottom = 0.000247478 Done calling nodal solver Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.372471471 seconds MAC Proj :0.111529023 seconds Nodal Proj :0.257600018 seconds Reactions :1.544016647 seconds Misc :0.257466407 seconds Base State :0.001745738999 seconds Time to advance time step: 2.571113699 Call to estdt for level 0 gives dt_lev = 0.2285161774 Call to estdt for level 1 gives dt_lev = 0.1613599181 Minimum estdt over all levels = 0.1613599181 Call to estdt at beginning of step 2 gives dt =0.1613599181 dt_growth factor limits the new dt = 0.0003017496696  Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 709087.2083 MLMG: Initial residual (resid0) = 709087.2083 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005366309961, 7.567912518e-10 MLMG: Timers: Solve = 0.055451978 Iter = 0.051371036 Bottom = 0.000193981 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 709086.6226 MLMG: Initial residual (resid0) = 129230.7288 MLMG: Final Iter. 5 resid, resid/bnorm = 9.585552004e-05, 1.351816788e-10 MLMG: Timers: Solve = 0.047547796 Iter = 0.043434931 Bottom = 0.000157983 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3903892.245 MLMG: Initial residual (resid0) = 3903892.245 MLMG: Final Iter. 9 resid, resid/bnorm = 1.615658402e-05, 4.138583498e-12 MLMG: Timers: Solve = 0.204957443 Iter = 0.200883491 Bottom = 0.000250235 Done calling nodal solver Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696 Timing summary: Advection :0.375332213 seconds MAC Proj :0.116576455 seconds Nodal Proj :0.25644259 seconds Reactions :1.562159783 seconds Misc :0.258898853 seconds Base State :0.001740181 seconds Time to advance time step: 2.569894793 Time to regrid: 0.120142357 Call to estdt for level 0 gives dt_lev = 0.2285277611 Call to estdt for level 1 gives dt_lev = 0.161379943 Minimum estdt over all levels = 0.161379943 Call to estdt at beginning of step 3 gives dt =0.161379943 dt_growth factor limits the new dt = 0.0003319246366  Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003319246366 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1070293.273 MLMG: Initial residual (resid0) = 1070293.273 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005793993641, 5.413463571e-10 MLMG: Timers: Solve = 0.055575843 Iter = 0.051459431 Bottom = 0.000197382 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1070292.628 MLMG: Initial residual (resid0) = 47909.95947 MLMG: Final Iter. 5 resid, resid/bnorm = 0.000143692364, 1.342552123e-10 MLMG: Timers: Solve = 0.047093811 Iter = 0.042982044 Bottom = 0.000147237 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 4294280.633 MLMG: Initial residual (resid0) = 4294280.633 MLMG: Final Iter. 9 resid, resid/bnorm = 1.778220758e-05, 4.140904868e-12 MLMG: Timers: Solve = 0.206298252 Iter = 0.202083401 Bottom = 0.000246258 Done calling nodal solver Timestep 3 ends with TIME = 0.0009079921877 DT = 0.0003319246366 Timing summary: Advection :0.377717946 seconds MAC Proj :0.116128639 seconds Nodal Proj :0.258170804 seconds Reactions :1.558597962 seconds Misc :0.258956737 seconds Base State :0.001702353 seconds Time to advance time step: 2.570072141 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.045961509 Writing checkpoint 3 Writing checkpoint reacting_bubble_2d_chk0000003 Total Time: 18.06030281 Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] AMReX (26.01-4-g2dc1f6ab47fa) finalized