Initializing AMReX (26.01-17-g909028cb95b3)... MPI initialized with 4 MPI processes MPI initialized with thread support level 0 AMReX (26.01-17-g909028cb95b3) initialized Calling Setup() Calling ReadParameters() reading extern runtime parameters ... Calling VariableSetup() Calling BCSetup() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 1 dr of MAESTRO base state = 281250.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 729 radius at r_cutoff 205171875 Maximum HSE Error = 0.500936 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.085461395 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.01642113 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.03966247 Call to firstdt for level 0 gives dt_lev = 0.0004741795922 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922 Call to firstdt for level 1 gives dt_lev = 0.0002743178815 Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815 Minimum firstdt over all levels = 0.0002743178815 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 9701.860973 MLMG: Initial residual (resid0) = 9701.860973 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0003239457833, 3.339006652e-08 MLMG: Timers: Solve = 0.784918078 Iter = 0.768659252 Bottom = 0.00027103 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1641628699 Call to estdt for level 1 gives dt_lev = 0.1158500463 Minimum estdt over all levels = 0.1158500463 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500463 Multiplying dt by init_shrink; dt = 0.1158500463 Ignoring this new dt since it's larger than the previous dt = 0.0002743178815 Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.061270179 Doing initial pressure iteration #1  Timestep 0 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1769558.576 MLMG: Initial residual (resid0) = 1769558.576 MLMG: Final Iter. 7 resid, resid/bnorm = 0.001462563772, 8.265133418e-10 MLMG: Timers: Solve = 0.063307975 Iter = 0.056981719 Bottom = 0.00021765 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1769557.101 MLMG: Initial residual (resid0) = 12562.98069 MLMG: Final Iter. 4 resid, resid/bnorm = 0.0003393794004, 1.917877645e-10 MLMG: Timers: Solve = 0.035725807 Iter = 0.032957801 Bottom = 0.000119339 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.293088754e+10 MLMG: Initial residual (resid0) = 1.293088754e+10 MLMG: Final Iter. 9 resid, resid/bnorm = 0.05357074738, 4.142851541e-12 MLMG: Timers: Solve = 1.3428977 Iter = 1.329156879 Bottom = 0.000479783 Done calling nodal solver Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.798412444 seconds MAC Proj :0.110942136 seconds Nodal Proj :1.392582563 seconds Reactions :1.562358305 seconds Misc :0.271026362 seconds Base State :0.002081134 seconds Time to advance time step: 4.175963344 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.006559394 Writing checkpoint 0 after all initialization Writing checkpoint reacting_bubble_2d_chk0000000 Beginning main evolution  Timestep 1 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 484084.2371 MLMG: Initial residual (resid0) = 484084.2371 MLMG: Final Iter. 7 resid, resid/bnorm = 3.840929122e-05, 7.934423034e-11 MLMG: Timers: Solve = 0.060710113 Iter = 0.057918821 Bottom = 0.000220411 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 484084.2265 MLMG: Initial residual (resid0) = 15.7407683 MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002645828979, 5.465637659e-10 MLMG: Timers: Solve = 0.028521066 Iter = 0.025748291 Bottom = 0.000101721 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3547174.998 MLMG: Initial residual (resid0) = 3547174.998 MLMG: Final Iter. 9 resid, resid/bnorm = 1.471862197e-05, 4.14939268e-12 MLMG: Timers: Solve = 1.403456273 Iter = 1.389251971 Bottom = 0.000499505 Done calling nodal solver Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.774451534 seconds MAC Proj :0.099513737 seconds Nodal Proj :1.454776509 seconds Reactions :1.647423294 seconds Misc :0.243052579 seconds Base State :0.001420306 seconds Time to advance time step: 4.243218284 Call to estdt for level 0 gives dt_lev = 0.2285161774 Call to estdt for level 1 gives dt_lev = 0.1613599181 Minimum estdt over all levels = 0.1613599181 Call to estdt at beginning of step 2 gives dt =0.1613599181 dt_growth factor limits the new dt = 0.0003017496696  Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 709087.2083 MLMG: Initial residual (resid0) = 709087.2083 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005366308523, 7.56791049e-10 MLMG: Timers: Solve = 0.050563711 Iter = 0.047866724 Bottom = 0.000200762 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 709086.6226 MLMG: Initial residual (resid0) = 129230.7288 MLMG: Final Iter. 5 resid, resid/bnorm = 9.585507951e-05, 1.351810575e-10 MLMG: Timers: Solve = 0.042700556 Iter = 0.040000223 Bottom = 0.00014761 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3903892.245 MLMG: Initial residual (resid0) = 3903892.245 MLMG: Final Iter. 9 resid, resid/bnorm = 1.621246338e-05, 4.152897253e-12 MLMG: Timers: Solve = 1.350847244 Iter = 1.336997823 Bottom = 0.000496817 Done calling nodal solver Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696 Timing summary: Advection :0.745231888 seconds MAC Proj :0.103368734 seconds Nodal Proj :1.397065222 seconds Reactions :1.584864419 seconds Misc :0.246909848 seconds Base State :0.001600104001 seconds Time to advance time step: 4.077849842 Time to regrid: 0.110294048 Call to estdt for level 0 gives dt_lev = 0.2285277611 Call to estdt for level 1 gives dt_lev = 0.161379943 Minimum estdt over all levels = 0.161379943 Call to estdt at beginning of step 3 gives dt =0.161379943 dt_growth factor limits the new dt = 0.0003319246366  Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003319246366 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1070293.273 MLMG: Initial residual (resid0) = 1070293.273 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005793992405, 5.413462415e-10 MLMG: Timers: Solve = 0.050794479 Iter = 0.048061673 Bottom = 0.000200635 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1070292.628 MLMG: Initial residual (resid0) = 47909.95947 MLMG: Final Iter. 5 resid, resid/bnorm = 0.000143693066, 1.342558682e-10 MLMG: Timers: Solve = 0.042699577 Iter = 0.039952354 Bottom = 0.000135954 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 4294280.633 MLMG: Initial residual (resid0) = 4294280.633 MLMG: Final Iter. 9 resid, resid/bnorm = 1.781014726e-05, 4.147411121e-12 MLMG: Timers: Solve = 1.347081829 Iter = 1.333249459 Bottom = 0.000489415 Done calling nodal solver Timestep 3 ends with TIME = 0.0009079921877 DT = 0.0003319246366 Timing summary: Advection :0.759719043 seconds MAC Proj :0.103841899 seconds Nodal Proj :1.393894822 seconds Reactions :1.574048149 seconds Misc :0.232838448 seconds Base State :0.001998862 seconds Time to advance time step: 4.064812276 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.027161427 Writing checkpoint 3 Writing checkpoint reacting_bubble_2d_chk0000003 Total Time: 24.78047031 Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] AMReX (26.01-17-g909028cb95b3) finalized