Initializing AMReX (26.01-17-g909028cb95b3)... MPI initialized with 4 MPI processes MPI initialized with thread support level 0 OMP initialized with 4 OMP threads AMReX (26.01-17-g909028cb95b3) initialized Calling Setup() Calling ReadParameters() reading extern runtime parameters ... Calling VariableSetup() Calling BCSetup() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-3d_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.413425185 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.037530129 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.250250726 Call to firstdt for level 0 gives dt_lev = 0.0004741795139 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139 Minimum firstdt over all levels = 0.0004741795139 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 2054.815795 MLMG: Initial residual (resid0) = 2054.815795 MLMG: Final Iter. 7 resid, resid/bnorm = 5.608473685e-10, 2.729428934e-13 MLMG: Timers: Solve = 1.457453011 Iter = 1.411294986 Bottom = 0.035745508 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1719927642 Minimum estdt over all levels = 0.1719927642 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642 Multiplying dt by init_shrink; dt = 0.1719927642 Ignoring this new dt since it's larger than the previous dt = 0.0004741795139 Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.265769753 Doing initial pressure iteration #1  Timestep 0 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2728631.973 MLMG: Initial residual (resid0) = 2728631.973 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0002635691781, 9.659389051e-11 MLMG: Timers: Solve = 0.244393105 Iter = 0.224820888 Bottom = 0.038752508 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2728627.792 MLMG: Initial residual (resid0) = 8729.745289 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0002251304104, 8.250682306e-11 MLMG: Timers: Solve = 0.166368533 Iter = 0.144900472 Bottom = 0.025944526 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.157552615e+10 MLMG: Initial residual (resid0) = 1.157552615e+10 MLMG: Final Iter. 7 resid, resid/bnorm = 0.00265109539, 2.290259082e-13 MLMG: Timers: Solve = 1.421477614 Iter = 1.385516994 Bottom = 0.035629549 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :2.376192195 seconds MAC Proj :0.477800534 seconds Nodal Proj :1.527040466 seconds Reactions :1.690797468 seconds Misc :0.437346012 seconds Base State :0.009296464 seconds Time to advance time step: 6.538422853 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.224654433 Beginning main evolution  Timestep 1 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1308380.202 MLMG: Initial residual (resid0) = 1308380.202 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001225354354, 9.36543026e-11 MLMG: Timers: Solve = 0.178458871 Iter = 0.165506192 Bottom = 0.033110685 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1308380.236 MLMG: Initial residual (resid0) = 0.9822522488 MLMG: Final Iter. 4 resid, resid/bnorm = 3.543206185e-05, 2.708085989e-11 MLMG: Timers: Solve = 0.092742103 Iter = 0.079986163 Bottom = 0.016100736 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5488883.985 MLMG: Initial residual (resid0) = 5488883.985 MLMG: Final Iter. 7 resid, resid/bnorm = 1.249893103e-06, 2.277135218e-13 MLMG: Timers: Solve = 1.42593028 Iter = 1.391388404 Bottom = 0.031402481 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :2.0596845 seconds MAC Proj :0.324889905 seconds Nodal Proj :1.516253433 seconds Reactions :1.671303732 seconds Misc :0.424518048 seconds Base State :0.008779743 seconds Time to advance time step: 6.022185965 Call to estdt for level 0 gives dt_lev = 0.2012294718 Minimum estdt over all levels = 0.2012294718 Call to estdt at beginning of step 2 gives dt =0.2012294718 dt_growth factor limits the new dt = 0.0005215974653  Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1426181.405 MLMG: Initial residual (resid0) = 1426181.405 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001356363646, 9.510456668e-11 MLMG: Timers: Solve = 0.170220904 Iter = 0.157425501 Bottom = 0.030095738 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1426184.06 MLMG: Initial residual (resid0) = 5132.459653 MLMG: Final Iter. 6 resid, resid/bnorm = 3.085561548e-05, 2.163508648e-11 MLMG: Timers: Solve = 0.132180818 Iter = 0.119408294 Bottom = 0.024186361 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6063789.798 MLMG: Initial residual (resid0) = 6063789.798 MLMG: Final Iter. 7 resid, resid/bnorm = 1.366308425e-06, 2.253225244e-13 MLMG: Timers: Solve = 1.419415971 Iter = 1.385981352 Bottom = 0.028229704 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653 Timing summary: Advection :2.042665839 seconds MAC Proj :0.356539072 seconds Nodal Proj :1.514723883 seconds Reactions :1.682643529 seconds Misc :0.414876145 seconds Base State :0.003678224999 seconds Time to advance time step: 6.034871964 Call to estdt for level 0 gives dt_lev = 0.20128497 Minimum estdt over all levels = 0.20128497 Call to estdt at beginning of step 3 gives dt =0.20128497 dt_growth factor limits the new dt = 0.0005737572118  Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1597942.993 MLMG: Initial residual (resid0) = 1597942.993 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001505226828, 9.419778017e-11 MLMG: Timers: Solve = 0.171967753 Iter = 0.159164823 Bottom = 0.031628589 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1597945.914 MLMG: Initial residual (resid0) = 5863.170844 MLMG: Final Iter. 6 resid, resid/bnorm = 3.356465118e-05, 2.100487312e-11 MLMG: Timers: Solve = 0.131333264 Iter = 0.118613255 Bottom = 0.023074998 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6670310.291 MLMG: Initial residual (resid0) = 6670310.291 MLMG: Final Iter. 7 resid, resid/bnorm = 4.39084321e-06, 6.5826671e-13 MLMG: Timers: Solve = 1.393196774 Iter = 1.359782608 Bottom = 0.030886448 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118 Timing summary: Advection :2.022241376 seconds MAC Proj :0.35749222 seconds Nodal Proj :1.482119589 seconds Reactions :1.653227852 seconds Misc :0.430621965 seconds Base State :0.003692453 seconds Time to advance time step: 5.968725394 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.313582032 Total Time: 35.15728741 Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] AMReX (26.01-17-g909028cb95b3) finalized