Initializing AMReX (26.09-13-gb105892be1b2)... MPI initialized with 4 MPI processes MPI initialized with thread support level 0 OMP initialized with 4 OMP threads AMReX (26.09-13-gb105892be1b2) initialized Calling Setup() Calling ReadParameters() reading extern runtime parameters ... Calling VariableSetup() Calling BCSetup() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-2d_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.325185295 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.003160954 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-2d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.285331048 Call to firstdt for level 0 gives dt_lev = 0.0004741796958 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741796958 Minimum firstdt over all levels = 0.0004741796958 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 9721.075292 MLMG: Initial residual (resid0) = 9721.075292 MLMG: Final Iter. 5 resid, resid/bnorm = 2.739130468e-05, 2.817723746e-09 MLMG: Timers: Solve = 0.033642205 Iter = 0.030773067 Bottom = 0.001580575 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1640874127 Minimum estdt over all levels = 0.1640874127 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1640874127 Multiplying dt by init_shrink; dt = 0.1640874127 Ignoring this new dt since it's larger than the previous dt = 0.0004741796958 Writing plotfile reacting_bubble-2d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.262703595 Doing initial pressure iteration #1  Timestep 0 starts with TIME = 0 DT = 0.0004741796958 Cell Count: Level 0, 245760 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3039467.923 MLMG: Initial residual (resid0) = 3039467.923 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0002117207983, 6.965719121e-11 MLMG: Timers: Solve = 0.033996306 Iter = 0.030671282 Bottom = 0.003985239 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3039465.377 MLMG: Initial residual (resid0) = 12702.29496 MLMG: Final Iter. 4 resid, resid/bnorm = 0.0001906893052, 6.273777838e-11 MLMG: Timers: Solve = 0.017683402 Iter = 0.014578351 Bottom = 0.001629948 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.286261402e+10 MLMG: Initial residual (resid0) = 1.286261402e+10 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0005396008492, 4.195110327e-14 MLMG: Timers: Solve = 0.050717015 Iter = 0.048979152 Bottom = 0.00274169 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741796958 DT = 0.0004741796958 Timing summary: Advection :0.124975134 seconds MAC Proj :0.060469112 seconds Nodal Proj :0.063960424 seconds Reactions :0.395745053 seconds Misc :0.069464783 seconds Base State :0.0005516829995 seconds Time to advance time step: 0.727622483 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.253716631 Beginning main evolution  Timestep 1 starts with TIME = 0 DT = 0.0004741796958 Cell Count: Level 0, 245760 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 833900.7098 MLMG: Initial residual (resid0) = 833900.7098 MLMG: Final Iter. 7 resid, resid/bnorm = 8.080570416e-05, 9.690086987e-11 MLMG: Timers: Solve = 0.029171039 Iter = 0.025862803 Bottom = 0.003353319 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 833900.67 MLMG: Initial residual (resid0) = 1.478931334 MLMG: Final Iter. 4 resid, resid/bnorm = 4.254072805e-05, 5.101414302e-11 MLMG: Timers: Solve = 0.017764728 Iter = 0.01470919 Bottom = 0.001275857 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6099195.993 MLMG: Initial residual (resid0) = 6099195.993 MLMG: Final Iter. 8 resid, resid/bnorm = 2.748856787e-07, 4.506916633e-14 MLMG: Timers: Solve = 0.048016621 Iter = 0.04637697 Bottom = 0.001747632 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741796958 DT = 0.0004741796958 Timing summary: Advection :0.120720578 seconds MAC Proj :0.054714607 seconds Nodal Proj :0.061042538 seconds Reactions :0.38688728 seconds Misc :0.058721657 seconds Base State :0.000539872 seconds Time to advance time step: 0.694012866 Call to estdt for level 0 gives dt_lev = 0.2283219495 Minimum estdt over all levels = 0.2283219495 Call to estdt at beginning of step 2 gives dt =0.2283219495 dt_growth factor limits the new dt = 0.0005215976653  Timestep 2 starts with TIME = 0.0004741796958 DT = 0.0005215976653 Cell Count: Level 0, 245760 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 910937.2256 MLMG: Initial residual (resid0) = 910937.2256 MLMG: Final Iter. 7 resid, resid/bnorm = 8.93559652e-05, 9.809234126e-11 MLMG: Timers: Solve = 0.027517367 Iter = 0.023945951 Bottom = 0.002242508 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 910943.1296 MLMG: Initial residual (resid0) = 4850.38368 MLMG: Final Iter. 6 resid, resid/bnorm = 2.823446201e-05, 3.099475817e-11 MLMG: Timers: Solve = 0.022002788 Iter = 0.020163663 Bottom = 0.001550002 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6722905.404 MLMG: Initial residual (resid0) = 6722905.404 MLMG: Final Iter. 8 resid, resid/bnorm = 2.643864718e-07, 3.932622221e-14 MLMG: Timers: Solve = 0.047782392 Iter = 0.046089481 Bottom = 0.001788597 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957773611 DT = 0.0005215976653 Timing summary: Advection :0.117924134 seconds MAC Proj :0.056212976 seconds Nodal Proj :0.060412116 seconds Reactions :0.388193653 seconds Misc :0.059190226 seconds Base State :0.0005167069996 seconds Time to advance time step: 0.683844798 Call to estdt for level 0 gives dt_lev = 0.2283888372 Minimum estdt over all levels = 0.2283888372 Call to estdt at beginning of step 3 gives dt =0.2283888372 dt_growth factor limits the new dt = 0.0005737574319  Timestep 3 starts with TIME = 0.0009957773611 DT = 0.0005737574319 Cell Count: Level 0, 245760 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1016966.589 MLMG: Initial residual (resid0) = 1016966.589 MLMG: Final Iter. 7 resid, resid/bnorm = 9.760777982e-05, 9.597933782e-11 MLMG: Timers: Solve = 0.027885843 Iter = 0.024429316 Bottom = 0.002189019 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1016973.082 MLMG: Initial residual (resid0) = 4440.00491 MLMG: Final Iter. 6 resid, resid/bnorm = 2.491618893e-05, 2.450034261e-11 MLMG: Timers: Solve = 0.023271761 Iter = 0.020006601 Bottom = 0.001599706 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 7395260.911 MLMG: Initial residual (resid0) = 7395260.911 MLMG: Final Iter. 8 resid, resid/bnorm = 2.846208307e-07, 3.848692211e-14 MLMG: Timers: Solve = 0.047897823 Iter = 0.0462696 Bottom = 0.00180448 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534793 DT = 0.0005737574319 Timing summary: Advection :0.117233308 seconds MAC Proj :0.058408401 seconds Nodal Proj :0.060837621 seconds Reactions :0.388468198 seconds Misc :0.05936837 seconds Base State :0.0005369800003 seconds Time to advance time step: 0.685962841 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.261305944 Total Time: 5.646522757 Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] AMReX (26.09-13-gb105892be1b2) finalized