Initializing CUDA... CUDA initialized with 1 GPU AMReX (19.11-284-g9290bd95f8e9) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density not supplied in the inputs file WARNING: setting burning_cutoff_density = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling Init() Calling InitData() ------------------------------------------------------------------------------ cutoff densities: low density cutoff (for mapping the model) = 0.1000000000E-09 buoyancy cutoff density (for zeroing rho - rho_0, centrifugal term) = 0.5000000000E-09 anelastic cutoff = 0.1000000000E-09 ------------------------------------------------------------------------------ Maximum HSE Error = 4.5474735088667091E-013 (after putting initial model into base state arrays, and for density < base_cutoff_density) ------------------------------------------------------------------------------ Writing plotfile RT_pltInitData after InitData Time to write plotfile: 0.110188797 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.003719159 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile RT_pltafter_InitProj after InitProj Time to write plotfile: 0.093869035 Call to firstdt for level 0 gives dt_lev = 0.000608983586 Multiplying dt_lev by init_shrink; dt_lev = 6.08983586e-05 Minimum firstdt over all levels = 6.08983586e-05 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.003427493 Iter = 0 Bottom = 0 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.08660444773 Minimum estdt over all levels = 0.08660444773 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.08660444773 Multiplying dt by init_shrink; dt = 0.008660444773 Ignoring this new dt since it's larger than the previous dt = 6.08983586e-05 Writing plotfile RT_pltafter_DivuIter after final DivuIter Time to write plotfile: 0.09833215 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 6.08983586e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 0.002421164472 MLMG: Initial residual (resid0) = 0.002421164472 MLMG: Final Iter. 9 resid, resid/bnorm = 1.751907791e-13, 7.235806619e-11 MLMG: Timers: Solve = 0.082409894 Iter = 0.077581017 Bottom = 0.018111398 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 0.002421205691 MLMG: Initial residual (resid0) = 2.151449932e-06 MLMG: Final Iter. 7 resid, resid/bnorm = 9.927909287e-14, 4.100398955e-11 MLMG: Timers: Solve = 0.063124171 Iter = 0.058925555 Bottom = 0.01306527 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 58.12657035 MLMG: Initial residual (resid0) = 58.12657035 MLMG: Final Iter. 9 resid, resid/bnorm = 5.412914561e-11, 9.312289593e-13 MLMG: Timers: Solve = 0.083737113 Iter = 0.081520925 Bottom = 0.016905624 Done calling nodal solver Timestep 0 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05 Timing summary: Advection :0.301649848 seconds MAC Proj :0.173885146 seconds Nodal Proj :0.098788509 seconds Reactions :0.016354255 seconds Misc :0.009185231 seconds Base State :0.002093942 seconds Time to advance time step: 0.599962655 Writing plotfile 0 after all initialization Time to write plotfile: 0.07882676 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 6.08983586e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2.394232065e-05 MLMG: Initial residual (resid0) = 2.394232065e-05 MLMG: Final Iter. 8 resid, resid/bnorm = 1.461507993e-15, 6.104287108e-11 MLMG: Timers: Solve = 0.071402128 Iter = 0.069045239 Bottom = 0.016678769 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2.394212268e-05 MLMG: Initial residual (resid0) = 1.926554856e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 6.252651103e-16, 2.611569236e-11 MLMG: Timers: Solve = 0.077963102 Iter = 0.075611847 Bottom = 0.016180732 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003539812277 MLMG: Initial residual (resid0) = 0.003539812277 MLMG: Final Iter. 9 resid, resid/bnorm = 3.308226089e-15, 9.345767034e-13 MLMG: Timers: Solve = 0.084165781 Iter = 0.081980958 Bottom = 0.017073743 Done calling nodal solver Timestep 1 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05 Timing summary: Advection :0.25618463 seconds MAC Proj :0.173867851 seconds Nodal Proj :0.097901511 seconds Reactions :0.010379982 seconds Misc :0.010144435 seconds Base State :0.001992842 seconds Time to advance time step: 0.548571402 Call to estdt for level 0 gives dt_lev = 0.3128879603 Minimum estdt over all levels = 0.3128879603 Timestep 2 starts with TIME = 6.08983586e-05 DT = 6.698819446e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.050050801e-05 MLMG: Initial residual (resid0) = 3.050050801e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 2.103733379e-15, 6.897371606e-11 MLMG: Timers: Solve = 0.079643224 Iter = 0.077320037 Bottom = 0.017956294 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.059070629e-05 MLMG: Initial residual (resid0) = 5.660811051e-06 MLMG: Final Iter. 10 resid, resid/bnorm = 4.880849482e-16, 1.595533439e-11 MLMG: Timers: Solve = 0.08662625 Iter = 0.084317298 Bottom = 0.01829686 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003894013592 MLMG: Initial residual (resid0) = 0.003894013592 MLMG: Final Iter. 9 resid, resid/bnorm = 3.639883533e-15, 9.347382713e-13 MLMG: Timers: Solve = 0.084009934 Iter = 0.081811775 Bottom = 0.016850269 Done calling nodal solver Timestep 2 ends with TIME = 0.0001278865531 DT = 6.698819446e-05 Timing summary: Advection :0.251053115 seconds MAC Proj :0.191276798 seconds Nodal Proj :0.096771081 seconds Reactions :0.010837632 seconds Misc :0.007069028 seconds Base State :0.001970917 seconds Time to advance time step: 0.557098884 Call to estdt for level 0 gives dt_lev = 0.313028636 Minimum estdt over all levels = 0.313028636 Timestep 3 starts with TIME = 0.0001278865531 DT = 7.368701391e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.168786035e-05 MLMG: Initial residual (resid0) = 3.168786035e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 6.108513624e-16, 1.927714133e-11 MLMG: Timers: Solve = 0.087634515 Iter = 0.085248612 Bottom = 0.019277576 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.178707874e-05 MLMG: Initial residual (resid0) = 1.012545857e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 6.893154125e-16, 2.16853967e-11 MLMG: Timers: Solve = 0.086690612 Iter = 0.084376532 Bottom = 0.018284845 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004283413868 MLMG: Initial residual (resid0) = 0.004283413868 MLMG: Final Iter. 9 resid, resid/bnorm = 4.018703773e-15, 9.382011396e-13 MLMG: Timers: Solve = 0.084242908 Iter = 0.082098476 Bottom = 0.017069878 Done calling nodal solver Timestep 3 ends with TIME = 0.000201573567 DT = 7.368701391e-05 Timing summary: Advection :0.247007438 seconds MAC Proj :0.200112824 seconds Nodal Proj :0.097868053 seconds Reactions :0.009643644 seconds Misc :0.007695837 seconds Base State :0.001969391 seconds Time to advance time step: 0.562420003 Call to estdt for level 0 gives dt_lev = 0.3130286821 Minimum estdt over all levels = 0.3130286821 Timestep 4 starts with TIME = 0.000201573567 DT = 8.10557153e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.570538661e-05 MLMG: Initial residual (resid0) = 3.570538661e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 7.610438565e-16, 2.131453903e-11 MLMG: Timers: Solve = 0.087586381 Iter = 0.085266688 Bottom = 0.019239759 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.581452695e-05 MLMG: Initial residual (resid0) = 1.50394254e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 8.909041717e-16, 2.487549739e-11 MLMG: Timers: Solve = 0.086601332 Iter = 0.084250211 Bottom = 0.018236978 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004711755493 MLMG: Initial residual (resid0) = 0.004711755493 MLMG: Final Iter. 9 resid, resid/bnorm = 4.398608214e-15, 9.335391491e-13 MLMG: Timers: Solve = 0.084540615 Iter = 0.082406883 Bottom = 0.017070772 Done calling nodal solver Timestep 4 ends with TIME = 0.0002826292823 DT = 8.10557153e-05 Timing summary: Advection :0.248369788 seconds MAC Proj :0.198993572 seconds Nodal Proj :0.097322298 seconds Reactions :0.010616907 seconds Misc :0.007195255 seconds Base State :0.002013512 seconds Time to advance time step: 0.562589812 Call to estdt for level 0 gives dt_lev = 0.3130286513 Minimum estdt over all levels = 0.3130286513 Timestep 5 starts with TIME = 0.0002826292823 DT = 8.916128683e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 4.013180239e-05 MLMG: Initial residual (resid0) = 4.013180239e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 9.725496775e-16, 2.423388982e-11 MLMG: Timers: Solve = 0.087598431 Iter = 0.085279746 Bottom = 0.019207806 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 4.025185678e-05 MLMG: Initial residual (resid0) = 2.044546585e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 1.115647424e-15, 2.771666981e-11 MLMG: Timers: Solve = 0.086851635 Iter = 0.084423217 Bottom = 0.018378864 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.005182931447 MLMG: Initial residual (resid0) = 0.005182931447 MLMG: Final Iter. 9 resid, resid/bnorm = 4.814508167e-15, 9.289160423e-13 MLMG: Timers: Solve = 0.084201823 Iter = 0.082029189 Bottom = 0.017026156 Done calling nodal solver Timestep 5 ends with TIME = 0.0003717905691 DT = 8.916128683e-05 Timing summary: Advection :0.248720765 seconds MAC Proj :0.20043815 seconds Nodal Proj :0.097655404 seconds Reactions :0.012686471 seconds Misc :0.007223105 seconds Base State :0.001906958 seconds Time to advance time step: 0.56682428 Writing plotfile 5 Time to write plotfile: 0.101394061 Total Time: 4.198062375 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [RT_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10470 [The Arena] space (MB): 9049 [The Device Arena] space (MB): 8 [The Managed Arena] space (MB): 8 [The Pinned Arena] space (MB): 8 AMReX (19.11-284-g9290bd95f8e9) finalized