Initializing CUDA... CUDA initialized with 1 GPU AMReX (19.11-284-g9290bd95f8e9) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density not supplied in the inputs file WARNING: setting burning_cutoff_density = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Calling set_method_params() Initializing Helmholtz EOS and using Coulomb corrections. Calling BCSetup() Calling init_base_state_geometry() Calling Init() Calling InitData() ------------------------------------------------------------------------------ reading initial model 640 points found in the initial model file 6 variables found in the initial model file ------------------------------------------------------------------------------ model file mapping, level: 0 dr of MAESTRO base state = 562500.0000 dr of input file data = 562500.0000 maximum radius (cell-centered) of input model = 359718750.0 setting r_cutoff to 365 radius at r_cutoff 205593750.0000000 Maximum HSE Error = 0.6051370840E-04 (after putting initial model into base state arrays, and for density < base_cutoff_density) ------------------------------------------------------------------------------ Writing plotfile reacting_bubble-3d_pltInitData after InitData inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 1.293575917 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.064939974 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 1.108031023 Call to firstdt for level 0 gives dt_lev = 0.0004741795139 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139 Minimum firstdt over all levels = 0.0004741795139 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 2054.812696 MLMG: Initial residual (resid0) = 2054.812696 MLMG: Final Iter. 7 resid, resid/bnorm = 5.590798935e-10, 2.720831415e-13 MLMG: Timers: Solve = 3.666779643 Iter = 3.604132547 Bottom = 0.03279045 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1719927642 Minimum estdt over all levels = 0.1719927642 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642 Multiplying dt by init_shrink; dt = 0.1719927642 Ignoring this new dt since it's larger than the previous dt = 0.0004741795139 Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 1.123656912 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2728630.345 MLMG: Initial residual (resid0) = 2728630.345 MLMG: Final Iter. 9 resid, resid/bnorm = 1.658638939e-05, 6.0786502e-12 MLMG: Timers: Solve = 0.340241417 Iter = 0.31380723 Bottom = 0.258892632 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2728641.904 MLMG: Initial residual (resid0) = 10999.90651 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0001328650456, 4.869273811e-11 MLMG: Timers: Solve = 0.260762315 Iter = 0.242134552 Bottom = 0.206217255 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.157559314e+10 MLMG: Initial residual (resid0) = 1.157559314e+10 MLMG: Final Iter. 8 resid, resid/bnorm = 0.004964321852, 4.288611211e-13 MLMG: Timers: Solve = 0.248971749 Iter = 0.246658098 Bottom = 0.191005098 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :4.461645856 seconds MAC Proj :0.811305598 seconds Nodal Proj :0.298773201 seconds Reactions :0.251917514 seconds Misc :0.079637394 seconds Base State :0.016423742 seconds Time to advance time step: 5.903420623 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.913892359 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1308204.011 MLMG: Initial residual (resid0) = 1308204.011 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001255782263, 9.599284608e-11 MLMG: Timers: Solve = 0.305530419 Iter = 0.303527167 Bottom = 0.255857229 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1308201.178 MLMG: Initial residual (resid0) = 4947.153554 MLMG: Final Iter. 7 resid, resid/bnorm = 3.879003891e-05, 2.96514325e-11 MLMG: Timers: Solve = 0.266711756 Iter = 0.264558834 Bottom = 0.222788086 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5488899.514 MLMG: Initial residual (resid0) = 5488899.514 MLMG: Final Iter. 8 resid, resid/bnorm = 2.207254056e-06, 4.021305273e-13 MLMG: Timers: Solve = 0.245366046 Iter = 0.242649136 Bottom = 0.187077332 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :2.555351319 seconds MAC Proj :0.720924874 seconds Nodal Proj :0.288585893 seconds Reactions :0.213133201 seconds Misc :0.080052263 seconds Base State :0.002452062 seconds Time to advance time step: 3.858193104 Writing plotfile 1 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.892745341 Call to estdt for level 0 gives dt_lev = 0.2012365628 Minimum estdt over all levels = 0.2012365628 Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1417794.979 MLMG: Initial residual (resid0) = 1417794.979 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001366646175, 9.639236945e-11 MLMG: Timers: Solve = 0.324377368 Iter = 0.32236494 Bottom = 0.274617772 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1417799.195 MLMG: Initial residual (resid0) = 87600.98282 MLMG: Final Iter. 7 resid, resid/bnorm = 0.0001005259632, 7.090282147e-11 MLMG: Timers: Solve = 0.256676534 Iter = 0.254664567 Bottom = 0.212901634 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6063789.033 MLMG: Initial residual (resid0) = 6063789.033 MLMG: Final Iter. 8 resid, resid/bnorm = 2.764631063e-06, 4.559246781e-13 MLMG: Timers: Solve = 0.251587907 Iter = 0.248912199 Bottom = 0.193542683 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653 Timing summary: Advection :2.463312854 seconds MAC Proj :0.728433971 seconds Nodal Proj :0.292407789 seconds Reactions :0.207793148 seconds Misc :0.071945122 seconds Base State :0.002606936 seconds Time to advance time step: 3.76404854 Writing plotfile 2 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 1.149406034 Call to estdt for level 0 gives dt_lev = 0.2012849006 Minimum estdt over all levels = 0.2012849006 Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1588645.361 MLMG: Initial residual (resid0) = 1588645.361 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001475109311, 9.285327913e-11 MLMG: Timers: Solve = 0.306126079 Iter = 0.30415975 Bottom = 0.256492128 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1588650.068 MLMG: Initial residual (resid0) = 54100.00217 MLMG: Final Iter. 7 resid, resid/bnorm = 9.410937927e-06, 5.923858322e-12 MLMG: Timers: Solve = 0.265443721 Iter = 0.263446836 Bottom = 0.221750168 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6670311.489 MLMG: Initial residual (resid0) = 6670311.489 MLMG: Final Iter. 8 resid, resid/bnorm = 2.776272595e-06, 4.162133357e-13 MLMG: Timers: Solve = 0.290817581 Iter = 0.288016428 Bottom = 0.228955314 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118 Timing summary: Advection :2.461057616 seconds MAC Proj :0.717297238 seconds Nodal Proj :0.33493545 seconds Reactions :0.207609297 seconds Misc :0.073760568 seconds Base State :0.002826153 seconds Time to advance time step: 3.79505931 Writing plotfile 3 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 1.215303001 Total Time: 62.75832596 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 6) :: [2, 2, 2, 2, 2, 2] [TOP]::system.regtest_reduction(nvals = 1) :: [1] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 8084 [The Arena] space (MB): 9049 [The Device Arena] space (MB): 8 [The Managed Arena] space (MB): 8 [The Pinned Arena] space (MB): 8 AMReX (19.11-284-g9290bd95f8e9) finalized