Initializing CUDA... CUDA initialized with 1 GPU AMReX (19.11-328-g5a9eb93e2e9e) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density not supplied in the inputs file WARNING: setting burning_cutoff_density = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Calling set_method_params() Initializing Helmholtz EOS and using Coulomb corrections. Calling BCSetup() Calling init_base_state_geometry() Calling Init() Calling InitData() ------------------------------------------------------------------------------ reading initial model 640 points found in the initial model file 6 variables found in the initial model file ------------------------------------------------------------------------------ model file mapping, level: 0 dr of MAESTRO base state = 562500.0000 dr of input file data = 562500.0000 maximum radius (cell-centered) of input model = 359718750.0 setting r_cutoff to 365 radius at r_cutoff 205593750.0000000 Maximum HSE Error = 0.6051370840E-04 (after putting initial model into base state arrays, and for density < base_cutoff_density) ------------------------------------------------------------------------------ Writing plotfile reacting_bubble-3d_pltInitData after InitData inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 1.260658244 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.061841679 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 1.060969576 Call to firstdt for level 0 gives dt_lev = 0.0004741795139 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139 Minimum firstdt over all levels = 0.0004741795139 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 2054.812696 MLMG: Initial residual (resid0) = 2054.812696 MLMG: Final Iter. 7 resid, resid/bnorm = 5.590798935e-10, 2.720831415e-13 MLMG: Timers: Solve = 3.602665552 Iter = 3.544193122 Bottom = 0.033381481 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1719927642 Minimum estdt over all levels = 0.1719927642 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642 Multiplying dt by init_shrink; dt = 0.1719927642 Ignoring this new dt since it's larger than the previous dt = 0.0004741795139 Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 1.142416462 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2728630.345 MLMG: Initial residual (resid0) = 2728630.345 MLMG: Final Iter. 9 resid, resid/bnorm = 1.658638939e-05, 6.0786502e-12 MLMG: Timers: Solve = 0.354172054 Iter = 0.328293309 Bottom = 0.272431775 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2728626.155 MLMG: Initial residual (resid0) = 8729.505839 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0002248525852, 8.240505386e-11 MLMG: Timers: Solve = 0.212008944 Iter = 0.193019993 Bottom = 0.162524883 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.157552621e+10 MLMG: Initial residual (resid0) = 1.157552621e+10 MLMG: Final Iter. 8 resid, resid/bnorm = 0.005502700806, 4.753737069e-13 MLMG: Timers: Solve = 0.250161133 Iter = 0.247585356 Bottom = 0.190383226 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :4.607381673 seconds MAC Proj :0.782001966 seconds Nodal Proj :0.301791863 seconds Reactions :0.258542316 seconds Misc :0.083566762 seconds Base State :0.017942992 seconds Time to advance time step: 6.033430511 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.926280704 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1308193.213 MLMG: Initial residual (resid0) = 1308193.213 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001222018327, 9.341267906e-11 MLMG: Timers: Solve = 0.337710102 Iter = 0.335702492 Bottom = 0.286795957 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1308193.247 MLMG: Initial residual (resid0) = 0.981974774 MLMG: Final Iter. 4 resid, resid/bnorm = 3.557984382e-05, 2.719769722e-11 MLMG: Timers: Solve = 0.17373262 Iter = 0.171608714 Bottom = 0.147187397 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5488884.015 MLMG: Initial residual (resid0) = 5488884.015 MLMG: Final Iter. 8 resid, resid/bnorm = 2.471264452e-06, 4.502307655e-13 MLMG: Timers: Solve = 0.26892868 Iter = 0.266149311 Bottom = 0.209222174 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :2.721675399 seconds MAC Proj :0.662394741 seconds Nodal Proj :0.310480064 seconds Reactions :0.219411926 seconds Misc :0.087576035 seconds Base State :0.002445314 seconds Time to advance time step: 4.001639795 Writing plotfile 1 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.90139179 Call to estdt for level 0 gives dt_lev = 0.2012294724 Minimum estdt over all levels = 0.2012294724 Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1417785.252 MLMG: Initial residual (resid0) = 1417785.252 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001353957487, 9.549806535e-11 MLMG: Timers: Solve = 0.300213076 Iter = 0.298225663 Bottom = 0.249523147 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1417789.529 MLMG: Initial residual (resid0) = 60994.35243 MLMG: Final Iter. 6 resid, resid/bnorm = 3.050288024e-05, 2.151439237e-11 MLMG: Timers: Solve = 0.250003467 Iter = 0.248037074 Bottom = 0.211440891 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6063790.017 MLMG: Initial residual (resid0) = 6063790.017 MLMG: Final Iter. 8 resid, resid/bnorm = 2.730172127e-06, 4.502418652e-13 MLMG: Timers: Solve = 0.26142523 Iter = 0.258701263 Bottom = 0.201834273 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653 Timing summary: Advection :2.615615825 seconds MAC Proj :0.702396047 seconds Nodal Proj :0.302267876 seconds Reactions :0.21176058 seconds Misc :0.07809433 seconds Base State :0.002584459 seconds Time to advance time step: 3.910227262 Writing plotfile 2 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.893311575 Call to estdt for level 0 gives dt_lev = 0.2012849721 Minimum estdt over all levels = 0.2012849721 Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1588645.934 MLMG: Initial residual (resid0) = 1588645.934 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001478542399, 9.306934716e-11 MLMG: Timers: Solve = 0.31937897 Iter = 0.317407313 Bottom = 0.268600483 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1588650.64 MLMG: Initial residual (resid0) = 22571.20547 MLMG: Final Iter. 6 resid, resid/bnorm = 3.303416224e-05, 2.079384946e-11 MLMG: Timers: Solve = 0.217181511 Iter = 0.215195444 Bottom = 0.178555981 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6670311.018 MLMG: Initial residual (resid0) = 6670311.018 MLMG: Final Iter. 8 resid, resid/bnorm = 2.877786756e-06, 4.314321698e-13 MLMG: Timers: Solve = 0.263995241 Iter = 0.261032744 Bottom = 0.204065628 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118 Timing summary: Advection :2.619375582 seconds MAC Proj :0.690796501 seconds Nodal Proj :0.305595223 seconds Reactions :0.212107256 seconds Misc :0.077157291 seconds Base State :0.00268457 seconds Time to advance time step: 3.90512631 Writing plotfile 3 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.895640184 Total Time: 63.40461543 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 6) :: [2, 2, 2, 2, 2, 2] [TOP]::system.regtest_reduction(nvals = 1) :: [1] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 7906 [The Arena] space (MB): 9049 [The Device Arena] space (MB): 8 [The Managed Arena] space (MB): 8 [The Pinned Arena] space (MB): 8 AMReX (19.11-328-g5a9eb93e2e9e) finalized