Initializing CUDA... CUDA initialized with 1 GPU AMReX (19.12-86-gdb1af7f7e79e) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density not supplied in the inputs file WARNING: setting burning_cutoff_density = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Calling set_method_params() Initializing Helmholtz EOS and using Coulomb corrections. Calling BCSetup() Calling init_base_state_geometry() Calling Init() Calling InitData() ------------------------------------------------------------------------------ reading initial model 640 points found in the initial model file 6 variables found in the initial model file ------------------------------------------------------------------------------ model file mapping, level: 0 dr of MAESTRO base state = 562500.0000 dr of input file data = 562500.0000 maximum radius (cell-centered) of input model = 359718750.0 setting r_cutoff to 365 radius at r_cutoff 205593750.0000000 Maximum HSE Error = 0.6051370840E-04 (after putting initial model into base state arrays, and for density < base_cutoff_density) ------------------------------------------------------------------------------ Writing plotfile reacting_bubble-3d_pltInitData after InitData inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 1.357283196 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.058316091 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 1.082056799 Call to firstdt for level 0 gives dt_lev = 0.0004741795139 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139 Minimum firstdt over all levels = 0.0004741795139 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 2054.812696 MLMG: Initial residual (resid0) = 2054.812696 MLMG: Final Iter. 7 resid, resid/bnorm = 5.590798935e-10, 2.720831415e-13 MLMG: Timers: Solve = 3.411565837 Iter = 3.357476938 Bottom = 0.03252856 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1719927642 Minimum estdt over all levels = 0.1719927642 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642 Multiplying dt by init_shrink; dt = 0.1719927642 Ignoring this new dt since it's larger than the previous dt = 0.0004741795139 Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 1.163199775 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2728630.345 MLMG: Initial residual (resid0) = 2728630.345 MLMG: Final Iter. 9 resid, resid/bnorm = 1.61677599e-05, 5.92522909e-12 MLMG: Timers: Solve = 1.500612346 Iter = 1.43793833 Bottom = 0.028016621 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2728626.155 MLMG: Initial residual (resid0) = 8729.505838 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0002248476376, 8.240324062e-11 MLMG: Timers: Solve = 0.853533173 Iter = 0.798961415 Bottom = 0.016770897 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.157552621e+10 MLMG: Initial residual (resid0) = 1.157552621e+10 MLMG: Final Iter. 7 resid, resid/bnorm = 0.002692858163, 2.326337579e-13 MLMG: Timers: Solve = 3.387137177 Iter = 3.32234067 Bottom = 0.034378071 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :3.6278269 seconds MAC Proj :2.539061994 seconds Nodal Proj :3.675648 seconds Reactions :0.25685765 seconds Misc :0.083030693 seconds Base State :0.018755075 seconds Time to advance time step: 10.18257231 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 1.156480084 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1308193.213 MLMG: Initial residual (resid0) = 1308193.213 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001156903018, 8.843517964e-11 MLMG: Timers: Solve = 1.344970371 Iter = 1.293271653 Bottom = 0.025336963 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1308193.247 MLMG: Initial residual (resid0) = 0.9819741575 MLMG: Final Iter. 4 resid, resid/bnorm = 3.558164826e-05, 2.719907655e-11 MLMG: Timers: Solve = 0.706180957 Iter = 0.650155762 Bottom = 0.015575532 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5488884.015 MLMG: Initial residual (resid0) = 5488884.015 MLMG: Final Iter. 7 resid, resid/bnorm = 1.260894351e-06, 2.297177982e-13 MLMG: Timers: Solve = 3.371758657 Iter = 3.302903903 Bottom = 0.031085836 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :3.477596028 seconds MAC Proj :2.232253342 seconds Nodal Proj :3.652396915 seconds Reactions :0.244918032 seconds Misc :0.087375796 seconds Base State :0.020757223 seconds Time to advance time step: 9.694718833 Writing plotfile 1 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 1.142976326 Call to estdt for level 0 gives dt_lev = 0.2012294724 Minimum estdt over all levels = 0.2012294724 Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1417785.252 MLMG: Initial residual (resid0) = 1417785.252 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001352792606, 9.541590335e-11 MLMG: Timers: Solve = 1.324175497 Iter = 1.271952675 Bottom = 0.024229662 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1417789.529 MLMG: Initial residual (resid0) = 60994.35243 MLMG: Final Iter. 6 resid, resid/bnorm = 3.051832709e-05, 2.15252874e-11 MLMG: Timers: Solve = 1.017531821 Iter = 0.962773982 Bottom = 0.022137954 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6063790.017 MLMG: Initial residual (resid0) = 6063790.017 MLMG: Final Iter. 8 resid, resid/bnorm = 4.918868477e-07, 8.111871392e-14 MLMG: Timers: Solve = 3.831332109 Iter = 3.766949984 Bottom = 0.035872409 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653 Timing summary: Advection :3.479851331 seconds MAC Proj :2.521991021 seconds Nodal Proj :4.113186117 seconds Reactions :0.234378956 seconds Misc :0.097362333 seconds Base State :0.016520447 seconds Time to advance time step: 10.44694582 Writing plotfile 2 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 1.141946526 Call to estdt for level 0 gives dt_lev = 0.2012849721 Minimum estdt over all levels = 0.2012849721 Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1588645.934 MLMG: Initial residual (resid0) = 1588645.934 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001471647556, 9.263533963e-11 MLMG: Timers: Solve = 1.325655623 Iter = 1.273529007 Bottom = 0.026842046 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1588650.64 MLMG: Initial residual (resid0) = 22571.20547 MLMG: Final Iter. 6 resid, resid/bnorm = 3.304072789e-05, 2.07979823e-11 MLMG: Timers: Solve = 1.010674398 Iter = 0.954834705 Bottom = 0.018102332 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6670311.018 MLMG: Initial residual (resid0) = 6670311.018 MLMG: Final Iter. 7 resid, resid/bnorm = 1.953843457e-06, 2.929163949e-13 MLMG: Timers: Solve = 3.378984349 Iter = 3.314426169 Bottom = 0.031568814 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118 Timing summary: Advection :3.489467909 seconds MAC Proj :2.515227724 seconds Nodal Proj :3.66312036 seconds Reactions :0.233658053 seconds Misc :0.098448988 seconds Base State :0.018984309 seconds Time to advance time step: 10.0001167 Writing plotfile 3 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 1.155753013 Total Time: 86.63291028 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 6) :: [2, 2, 2, 2, 2, 2] [TOP]::system.regtest_reduction(nvals = 1) :: [1] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 8043 [The Arena] space (MB): 9049 [The Device Arena] space (MB): 8 [The Managed Arena] space (MB): 8 [The Pinned Arena] space (MB): 8 AMReX (19.12-86-gdb1af7f7e79e) finalized