Initializing CUDA...
CUDA initialized with 1 GPU
AMReX (19.12-100-g4a61da6361aa) initialized
Calling Setup()
Calling ReadParameters()
WARNING: burning_cutoff_density_lo not supplied in the inputs file
WARNING: setting burning_cutoff_density_lo = base_cutoff_density
reading extern runtime parameters ...
ERROR: problem in the namelist
Calling VariableSetup()
Calling set_method_params()
Calling BCSetup()
Calling init_base_state_geometry()
Calling Init()
Calling InitData()
------------------------------------------------------------------------------
cutoff densities:
low density cutoff (for mapping the model) = 0.1000000000E-09
buoyancy cutoff density
(for zeroing rho - rho_0, centrifugal term) = 0.5000000000E-09
anelastic cutoff = 0.1000000000E-09
------------------------------------------------------------------------------
Maximum HSE Error = 4.5474735088667091E-013
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
------------------------------------------------------------------------------
Writing plotfile RT_pltInitData after InitData
Time to write plotfile: 0.11253215
Doing initial projection
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.003563785 Iter = 0 Bottom = 0
Done calling nodal solver
Writing plotfile RT_pltafter_InitProj after InitProj
Time to write plotfile: 0.096063072
Call to firstdt for level 0 gives dt_lev = 0.000608983586
Multiplying dt_lev by init_shrink; dt_lev = 6.08983586e-05
Minimum firstdt over all levels = 6.08983586e-05
Doing initial divu iteration #1
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.003413078 Iter = 0 Bottom = 0
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.08660444773
Minimum estdt over all levels = 0.08660444773
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.08660444773
Multiplying dt by init_shrink; dt = 0.008660444773
Ignoring this new dt since it's larger than the previous dt = 6.08983586e-05
Writing plotfile RT_pltafter_DivuIter after final DivuIter
Time to write plotfile: 0.100676511
Doing initial pressure iteration #1
Timestep 0 starts with TIME = 0 DT = 6.08983586e-05
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 0.002421164472
MLMG: Initial residual (resid0) = 0.002421164472
MLMG: Final Iter. 9 resid, resid/bnorm = 1.751907783e-13, 7.235806588e-11
MLMG: Timers: Solve = 0.107499075 Iter = 0.100737515 Bottom = 0.001814107
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 0.002421205691
MLMG: Initial residual (resid0) = 2.151449932e-06
MLMG: Final Iter. 7 resid, resid/bnorm = 9.927909525e-14, 4.100399054e-11
MLMG: Timers: Solve = 0.084469568 Iter = 0.078418897 Bottom = 0.001466037
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 58.12657035
MLMG: Initial residual (resid0) = 58.12657035
MLMG: Final Iter. 8 resid, resid/bnorm = 9.244160992e-12, 1.590350323e-13
MLMG: Timers: Solve = 0.280009634 Iter = 0.275070333 Bottom = 0.002221216
Done calling nodal solver
Timestep 0 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05
Timing summary:
Advection :0.309598416 seconds
MAC Proj :0.22293145 seconds
Nodal Proj :0.30815299 seconds
Reactions :0.016442241 seconds
Misc :0.008957819 seconds
Base State :0.002348196 seconds
Time to advance time step: 0.866204363
Writing plotfile 0 after all initialization
Time to write plotfile: 0.104451328
Calling Evolve()
Timestep 1 starts with TIME = 0 DT = 6.08983586e-05
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 2.394238647e-05
MLMG: Initial residual (resid0) = 2.394238647e-05
MLMG: Final Iter. 9 resid, resid/bnorm = 3.179972761e-16, 1.328177024e-11
MLMG: Timers: Solve = 0.106649277 Iter = 0.101216973 Bottom = 0.002094159
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 2.394218844e-05
MLMG: Initial residual (resid0) = 1.928423812e-06
MLMG: Final Iter. 9 resid, resid/bnorm = 6.036507354e-16, 2.521284706e-11
MLMG: Timers: Solve = 0.107882605 Iter = 0.100870247 Bottom = 0.001837868
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.003539812449
MLMG: Initial residual (resid0) = 0.003539812449
MLMG: Final Iter. 8 resid, resid/bnorm = 5.642188106e-16, 1.593922895e-13
MLMG: Timers: Solve = 0.278458135 Iter = 0.273534849 Bottom = 0.002229369
Done calling nodal solver
Timestep 1 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05
Timing summary:
Advection :0.309466112 seconds
MAC Proj :0.24507517 seconds
Nodal Proj :0.307485773 seconds
Reactions :0.015162686 seconds
Misc :0.009613283 seconds
Base State :0.002255078 seconds
Time to advance time step: 0.886946499
Call to estdt for level 0 gives dt_lev = 0.3128878797
Minimum estdt over all levels = 0.3128878797
Timestep 2 starts with TIME = 6.08983586e-05 DT = 6.698819446e-05
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 3.050043586e-05
MLMG: Initial residual (resid0) = 3.050043586e-05
MLMG: Final Iter. 9 resid, resid/bnorm = 2.2848142e-15, 7.491087049e-11
MLMG: Timers: Solve = 0.107429075 Iter = 0.101931066 Bottom = 0.001997242
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 3.059063412e-05
MLMG: Initial residual (resid0) = 5.66083759e-06
MLMG: Final Iter. 10 resid, resid/bnorm = 4.892619004e-16, 1.59938463e-11
MLMG: Timers: Solve = 0.118328997 Iter = 0.112223809 Bottom = 0.002043279
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.003894013591
MLMG: Initial residual (resid0) = 0.003894013591
MLMG: Final Iter. 8 resid, resid/bnorm = 6.214646853e-16, 1.595948937e-13
MLMG: Timers: Solve = 0.278362822 Iter = 0.273487926 Bottom = 0.002204104
Done calling nodal solver
Timestep 2 ends with TIME = 0.0001278865531 DT = 6.698819446e-05
Timing summary:
Advection :0.314266962 seconds
MAC Proj :0.255678637 seconds
Nodal Proj :0.306452827 seconds
Reactions :0.013242775 seconds
Misc :0.012829455 seconds
Base State :0.002660236 seconds
Time to advance time step: 0.902615419
Call to estdt for level 0 gives dt_lev = 0.3130286362
Minimum estdt over all levels = 0.3130286362
Timestep 3 starts with TIME = 0.0001278865531 DT = 7.368701391e-05
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 3.168800511e-05
MLMG: Initial residual (resid0) = 3.168800511e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 5.650721963e-16, 1.783236888e-11
MLMG: Timers: Solve = 0.118150502 Iter = 0.112708192 Bottom = 0.002147326
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 3.178722338e-05
MLMG: Initial residual (resid0) = 1.012935749e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 6.833607709e-16, 2.149796988e-11
MLMG: Timers: Solve = 0.12187302 Iter = 0.115801073 Bottom = 0.002099821
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.004283414244
MLMG: Initial residual (resid0) = 0.004283414244
MLMG: Final Iter. 8 resid, resid/bnorm = 6.982261991e-16, 1.630069284e-13
MLMG: Timers: Solve = 0.278447003 Iter = 0.273408534 Bottom = 0.002235586
Done calling nodal solver
Timestep 3 ends with TIME = 0.000201573567 DT = 7.368701391e-05
Timing summary:
Advection :0.315102391 seconds
MAC Proj :0.269368115 seconds
Nodal Proj :0.30640592 seconds
Reactions :0.012971588 seconds
Misc :0.012006419 seconds
Base State :0.002446614 seconds
Time to advance time step: 0.915999478
Call to estdt for level 0 gives dt_lev = 0.3130285358
Minimum estdt over all levels = 0.3130285358
Timestep 4 starts with TIME = 0.000201573567 DT = 8.10557153e-05
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 3.570538737e-05
MLMG: Initial residual (resid0) = 3.570538737e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 7.571102355e-16, 2.120436974e-11
MLMG: Timers: Solve = 0.117469641 Iter = 0.112235617 Bottom = 0.002136116
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 3.581452755e-05
MLMG: Initial residual (resid0) = 1.504387741e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 8.870129024e-16, 2.476684639e-11
MLMG: Timers: Solve = 0.119186022 Iter = 0.11211351 Bottom = 0.002036494
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.004711755907
MLMG: Initial residual (resid0) = 0.004711755907
MLMG: Final Iter. 8 resid, resid/bnorm = 7.669646168e-16, 1.627768144e-13
MLMG: Timers: Solve = 0.281399493 Iter = 0.276446876 Bottom = 0.002215414
Done calling nodal solver
Timestep 4 ends with TIME = 0.0002826292823 DT = 8.10557153e-05
Timing summary:
Advection :0.316308758 seconds
MAC Proj :0.267131212 seconds
Nodal Proj :0.309530312 seconds
Reactions :0.013505824 seconds
Misc :0.011603129 seconds
Base State :0.002365441 seconds
Time to advance time step: 0.918259757
Call to estdt for level 0 gives dt_lev = 0.313028505
Minimum estdt over all levels = 0.313028505
Timestep 5 starts with TIME = 0.0002826292823 DT = 8.916128683e-05
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 4.013180326e-05
MLMG: Initial residual (resid0) = 4.013180326e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 9.681417181e-16, 2.412405223e-11
MLMG: Timers: Solve = 0.117542197 Iter = 0.112290052 Bottom = 0.002139709
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 4.025185749e-05
MLMG: Initial residual (resid0) = 2.044985444e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 1.111034482e-15, 2.760206737e-11
MLMG: Timers: Solve = 0.119884862 Iter = 0.113887294 Bottom = 0.00212279
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.005182931902
MLMG: Initial residual (resid0) = 0.005182931902
MLMG: Final Iter. 8 resid, resid/bnorm = 8.495808224e-16, 1.63918963e-13
MLMG: Timers: Solve = 0.278674207 Iter = 0.273807237 Bottom = 0.002235414
Done calling nodal solver
Timestep 5 ends with TIME = 0.0003717905691 DT = 8.916128683e-05
Timing summary:
Advection :0.311187063 seconds
MAC Proj :0.268688474 seconds
Nodal Proj :0.307249902 seconds
Reactions :0.014510598 seconds
Misc :0.013282472 seconds
Base State :0.003147722 seconds
Time to advance time step: 0.915067561
Writing plotfile 5
Time to write plotfile: 0.104909965
Total Time: 6.248924502
Unused ParmParse Variables:
[TOP]::maestro.v(nvals = 1) :: [1]
[TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2]
[TOP]::amr.check_file(nvals = 1) :: [RT_chk]
[TOP]::amr.checkpoint_files_output(nvals = 1) :: [0]
Total GPU global memory (MB): 12066
Free GPU global memory (MB): 10289
[The Arena] space (MB): 9049
[The Device Arena] space (MB): 8
[The Managed Arena] space (MB): 8
[The Pinned Arena] space (MB): 8
AMReX (19.12-100-g4a61da6361aa) finalized