Initializing CUDA... CUDA initialized with 1 GPU AMReX (19.12-106-g1f49dd4d7ada) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Calling set_method_params() Initializing Helmholtz EOS and using Coulomb corrections. Calling BCSetup() Calling init_base_state_geometry() Calling Init() Calling InitData() ------------------------------------------------------------------------------ reading initial model 640 points found in the initial model file 6 variables found in the initial model file ------------------------------------------------------------------------------ model file mapping, level: 0 dr of MAESTRO base state = 562500.0000 dr of input file data = 562500.0000 maximum radius (cell-centered) of input model = 359718750.0 setting r_cutoff to 365 radius at r_cutoff 205593750.0000000 Maximum HSE Error = 0.6051370840E-04 (after putting initial model into base state arrays, and for density < base_cutoff_density) ------------------------------------------------------------------------------ Writing plotfile reacting_bubble-3d_pltInitData after InitData inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 1.280261428 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.062038812 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 1.074377454 Call to firstdt for level 0 gives dt_lev = 0.0004741795139 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139 Minimum firstdt over all levels = 0.0004741795139 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 2054.812696 MLMG: Initial residual (resid0) = 2054.812696 MLMG: Final Iter. 7 resid, resid/bnorm = 5.590798935e-10, 2.720831415e-13 MLMG: Timers: Solve = 3.430225666 Iter = 3.371745193 Bottom = 0.03376173 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1719927642 Minimum estdt over all levels = 0.1719927642 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642 Multiplying dt by init_shrink; dt = 0.1719927642 Ignoring this new dt since it's larger than the previous dt = 0.0004741795139 Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 1.152743346 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2728630.345 MLMG: Initial residual (resid0) = 2728630.345 MLMG: Final Iter. 9 resid, resid/bnorm = 1.61677599e-05, 5.92522909e-12 MLMG: Timers: Solve = 1.447077992 Iter = 1.385829995 Bottom = 0.028806002 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2728626.155 MLMG: Initial residual (resid0) = 8729.505838 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0002248476376, 8.240324062e-11 MLMG: Timers: Solve = 0.848051334 Iter = 0.792250562 Bottom = 0.016524454 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.157552621e+10 MLMG: Initial residual (resid0) = 1.157552621e+10 MLMG: Final Iter. 7 resid, resid/bnorm = 0.002692858163, 2.326337579e-13 MLMG: Timers: Solve = 3.488548196 Iter = 3.419227419 Bottom = 0.035306594 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :3.977341982 seconds MAC Proj :2.516941445 seconds Nodal Proj :3.782887974 seconds Reactions :0.264499219 seconds Misc :0.088519335 seconds Base State :0.018118585 seconds Time to advance time step: 10.63034362 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 1.14243285 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1308193.213 MLMG: Initial residual (resid0) = 1308193.213 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001156903018, 8.843517964e-11 MLMG: Timers: Solve = 1.282305664 Iter = 1.231206256 Bottom = 0.025759074 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1308193.247 MLMG: Initial residual (resid0) = 0.9819741575 MLMG: Final Iter. 4 resid, resid/bnorm = 3.558164826e-05, 2.719907655e-11 MLMG: Timers: Solve = 0.671312046 Iter = 0.617048912 Bottom = 0.014402435 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5488884.015 MLMG: Initial residual (resid0) = 5488884.015 MLMG: Final Iter. 7 resid, resid/bnorm = 1.260894351e-06, 2.297177982e-13 MLMG: Timers: Solve = 3.416730945 Iter = 3.347878813 Bottom = 0.031581008 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :3.779325225 seconds MAC Proj :2.149074068 seconds Nodal Proj :3.698465084 seconds Reactions :0.273242761 seconds Misc :0.095862853 seconds Base State :0.021816441 seconds Time to advance time step: 9.996154503 Writing plotfile 1 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 1.140301391 Call to estdt for level 0 gives dt_lev = 0.2012294724 Minimum estdt over all levels = 0.2012294724 Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1417785.252 MLMG: Initial residual (resid0) = 1417785.252 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001352792606, 9.541590335e-11 MLMG: Timers: Solve = 1.281143936 Iter = 1.229901442 Bottom = 0.024573909 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1417789.529 MLMG: Initial residual (resid0) = 60994.35243 MLMG: Final Iter. 6 resid, resid/bnorm = 3.051832709e-05, 2.15252874e-11 MLMG: Timers: Solve = 0.979718232 Iter = 0.925911004 Bottom = 0.020749235 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6063790.017 MLMG: Initial residual (resid0) = 6063790.017 MLMG: Final Iter. 8 resid, resid/bnorm = 4.918868477e-07, 8.111871392e-14 MLMG: Timers: Solve = 3.990311045 Iter = 3.920142769 Bottom = 0.038338342 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653 Timing summary: Advection :3.791054924 seconds MAC Proj :2.478218732 seconds Nodal Proj :4.272232225 seconds Reactions :0.274935414 seconds Misc :0.109247059 seconds Base State :0.022090537 seconds Time to advance time step: 10.92585986 Writing plotfile 2 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 1.144663069 Call to estdt for level 0 gives dt_lev = 0.2012849721 Minimum estdt over all levels = 0.2012849721 Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1588645.934 MLMG: Initial residual (resid0) = 1588645.934 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001471647556, 9.263533963e-11 MLMG: Timers: Solve = 1.284891412 Iter = 1.233826117 Bottom = 0.02825845 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1588650.64 MLMG: Initial residual (resid0) = 22571.20547 MLMG: Final Iter. 6 resid, resid/bnorm = 3.304072789e-05, 2.07979823e-11 MLMG: Timers: Solve = 0.976636815 Iter = 0.921800339 Bottom = 0.017517783 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6670311.018 MLMG: Initial residual (resid0) = 6670311.018 MLMG: Final Iter. 7 resid, resid/bnorm = 1.953843457e-06, 2.929163949e-13 MLMG: Timers: Solve = 3.494412909 Iter = 3.425597174 Bottom = 0.033396888 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118 Timing summary: Advection :3.814387354 seconds MAC Proj :2.439728466 seconds Nodal Proj :3.777442845 seconds Reactions :0.274109932 seconds Misc :0.108581389 seconds Base State :0.022211899 seconds Time to advance time step: 10.41445506 Writing plotfile 3 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 1.159638232 Total Time: 127.5040218 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 6) :: [2, 2, 2, 2, 2, 2] [TOP]::system.regtest_reduction(nvals = 1) :: [1] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 6697 [The Arena] space (MB): 9049 [The Device Arena] space (MB): 8 [The Managed Arena] space (MB): 8 [The Pinned Arena] space (MB): 8 AMReX (19.12-106-g1f49dd4d7ada) finalized