Initializing CUDA... CUDA initialized with 1 GPU AMReX (19.12-110-g14ef2853dd8f) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Calling set_method_params() Initializing Helmholtz EOS and using Coulomb corrections. Calling BCSetup() Calling init_base_state_geometry() Calling Init() Calling InitData() ------------------------------------------------------------------------------ reading initial model 640 points found in the initial model file 6 variables found in the initial model file ------------------------------------------------------------------------------ model file mapping, level: 0 dr of MAESTRO base state = 562500.0000 dr of input file data = 562500.0000 maximum radius (cell-centered) of input model = 359718750.0 setting r_cutoff to 365 radius at r_cutoff 205593750.0000000 Maximum HSE Error = 0.6051370840E-04 (after putting initial model into base state arrays, and for density < base_cutoff_density) ------------------------------------------------------------------------------ ------------------------------------------------------------------------------ model file mapping, level: 1 dr of MAESTRO base state = 281250.0000 dr of input file data = 562500.0000 maximum radius (cell-centered) of input model = 359718750.0 Maximum HSE Error = 0.5009359532 (after putting initial model into base state arrays, and for density < base_cutoff_density) ------------------------------------------------------------------------------ Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.340241711 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.00922404 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.296332888 Call to firstdt for level 0 gives dt_lev = 0.0004741795922 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922 Call to firstdt for level 1 gives dt_lev = 0.0002743178815 Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815 Minimum firstdt over all levels = 0.0002743178815 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 9701.829892 MLMG: Initial residual (resid0) = 9701.829892 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0001318674098, 1.359201421e-08 MLMG: Timers: Solve = 0.108553302 Iter = 0.099943258 Bottom = 0.010948136 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1641628699 Call to estdt for level 1 gives dt_lev = 0.1158500464 Minimum estdt over all levels = 0.1158500464 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500464 Multiplying dt by init_shrink; dt = 0.1158500464 Ignoring this new dt since it's larger than the previous dt = 0.0002743178815 Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.295763885 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1769558.576 MLMG: Initial residual (resid0) = 1769558.576 MLMG: Final Iter. 7 resid, resid/bnorm = 0.00146234234, 8.263882076e-10 MLMG: Timers: Solve = 0.11122281 Iter = 0.104794999 Bottom = 0.018209501 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1769557.101 MLMG: Initial residual (resid0) = 12562.98246 MLMG: Final Iter. 4 resid, resid/bnorm = 0.0003393795241, 1.917878344e-10 MLMG: Timers: Solve = 0.063609611 Iter = 0.05823521 Bottom = 0.00882553 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.293088754e+10 MLMG: Initial residual (resid0) = 1.293088754e+10 MLMG: Final Iter. 9 resid, resid/bnorm = 0.03759670258, 2.907511372e-12 MLMG: Timers: Solve = 0.184676315 Iter = 0.180429532 Bottom = 0.021332086 Done calling nodal solver Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.95557493 seconds MAC Proj :0.238485415 seconds Nodal Proj :0.217089496 seconds Reactions :0.090691276 seconds Misc :0.03308743 seconds Base State :0.005872765 seconds Time to advance time step: 1.535166011 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.30098876 Writing checkpoint 0 after all initialization Writing checkpoint reacting_bubble_2d_chk0000000 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 484084.2375 MLMG: Initial residual (resid0) = 484084.2375 MLMG: Final Iter. 7 resid, resid/bnorm = 3.84094172e-05, 7.934449053e-11 MLMG: Timers: Solve = 0.10983404 Iter = 0.104384781 Bottom = 0.017624741 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 484084.2269 MLMG: Initial residual (resid0) = 31.47969678 MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002703533007, 5.584840109e-10 MLMG: Timers: Solve = 0.051398807 Iter = 0.046031068 Bottom = 0.007477 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3547174.998 MLMG: Initial residual (resid0) = 3547174.998 MLMG: Final Iter. 9 resid, resid/bnorm = 1.031369902e-05, 2.907581111e-12 MLMG: Timers: Solve = 0.18261858 Iter = 0.178336569 Bottom = 0.021298387 Done calling nodal solver Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.952590287 seconds MAC Proj :0.225021276 seconds Nodal Proj :0.213916068 seconds Reactions :0.089401646 seconds Misc :0.035530127 seconds Base State :0.007199934 seconds Time to advance time step: 1.516665609 Call to estdt for level 0 gives dt_lev = 0.2285161775 Call to estdt for level 1 gives dt_lev = 0.1613599181 Minimum estdt over all levels = 0.1613599181 Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 709087.2124 MLMG: Initial residual (resid0) = 709087.2124 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005371487185, 7.575213727e-10 MLMG: Timers: Solve = 0.094150876 Iter = 0.088799084 Bottom = 0.015511121 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 709086.6267 MLMG: Initial residual (resid0) = 129230.7287 MLMG: Final Iter. 5 resid, resid/bnorm = 9.598444854e-05, 1.353635013e-10 MLMG: Timers: Solve = 0.07821359 Iter = 0.072832945 Bottom = 0.011129779 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3903892.245 MLMG: Initial residual (resid0) = 3903892.245 MLMG: Final Iter. 9 resid, resid/bnorm = 1.13438582e-05, 2.905781587e-12 MLMG: Timers: Solve = 0.182233593 Iter = 0.178011611 Bottom = 0.020983158 Done calling nodal solver Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696 Timing summary: Advection :0.980708014 seconds MAC Proj :0.237289442 seconds Nodal Proj :0.214049817 seconds Reactions :0.082319108 seconds Misc :0.038101451 seconds Base State :0.00716976 seconds Time to advance time step: 1.552675012 Time to regrid: 0.028540946 Call to estdt for level 0 gives dt_lev = 0.2285277613 Call to estdt for level 1 gives dt_lev = 0.1613799431 Minimum estdt over all levels = 0.1613799431 Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003319246366 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1070293.284 MLMG: Initial residual (resid0) = 1070293.284 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005794046583, 5.413512979e-10 MLMG: Timers: Solve = 0.094412655 Iter = 0.089003426 Bottom = 0.015385586 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1070292.64 MLMG: Initial residual (resid0) = 47909.95882 MLMG: Final Iter. 5 resid, resid/bnorm = 0.000141300049, 1.320200137e-10 MLMG: Timers: Solve = 0.0778092 Iter = 0.072475691 Bottom = 0.010810742 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 4294280.634 MLMG: Initial residual (resid0) = 4294280.634 MLMG: Final Iter. 9 resid, resid/bnorm = 1.247797627e-05, 2.905719801e-12 MLMG: Timers: Solve = 0.182595068 Iter = 0.178312724 Bottom = 0.021075131 Done calling nodal solver Timestep 3 ends with TIME = 0.0009079921877 DT = 0.0003319246366 Timing summary: Advection :0.97722892 seconds MAC Proj :0.236239033 seconds Nodal Proj :0.214491258 seconds Reactions :0.082567383 seconds Misc :0.040047867 seconds Base State :0.007017813 seconds Time to advance time step: 1.550778331 Writing plotfile 3 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.294377017 Writing checkpoint 3 Writing checkpoint reacting_bubble_2d_chk0000003 Total Time: 19.28116294 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10005 [The Arena] space (MB): 9049 [The Device Arena] space (MB): 8 [The Managed Arena] space (MB): 8 [The Pinned Arena] space (MB): 8 AMReX (19.12-110-g14ef2853dd8f) finalized