Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.01-59-g1b8a5df28a28) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Calling set_method_params() Initializing Helmholtz EOS and using Coulomb corrections. Calling BCSetup() Calling init_base_state_geometry() Calling Init() Calling InitData() ------------------------------------------------------------------------------ reading initial model 640 points found in the initial model file 6 variables found in the initial model file ------------------------------------------------------------------------------ model file mapping, level: 0 dr of MAESTRO base state = 562500.0000 dr of input file data = 562500.0000 maximum radius (cell-centered) of input model = 359718750.0 setting r_cutoff to 365 radius at r_cutoff 205593750.0000000 Maximum HSE Error = 0.6051370840E-04 (after putting initial model into base state arrays, and for density < base_cutoff_density) ------------------------------------------------------------------------------ Writing plotfile reacting_bubble-3d_pltInitData after InitData inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.919519317 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.016588751 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.865247186 Call to firstdt for level 0 gives dt_lev = 0.0004741795139 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139 Minimum firstdt over all levels = 0.0004741795139 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 2054.812696 MLMG: Initial residual (resid0) = 2054.812696 MLMG: Final Iter. 8 resid, resid/bnorm = 7.943867786e-11, 3.86598146e-14 MLMG: Timers: Solve = 0.231167414 Iter = 0.217703702 Bottom = 0.120047298 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1719927642 Minimum estdt over all levels = 0.1719927642 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642 Multiplying dt by init_shrink; dt = 0.1719927642 Ignoring this new dt since it's larger than the previous dt = 0.0004741795139 Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.83252632 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2728630.345 MLMG: Initial residual (resid0) = 2728630.345 MLMG: Final Iter. 9 resid, resid/bnorm = 1.624855213e-05, 5.954838169e-12 MLMG: Timers: Solve = 0.232274139 Iter = 0.2252806 Bottom = 0.169550651 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2728626.155 MLMG: Initial residual (resid0) = 8729.505838 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0002248471719, 8.240306996e-11 MLMG: Timers: Solve = 0.128592659 Iter = 0.126201661 Bottom = 0.09536848 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.157552621e+10 MLMG: Initial residual (resid0) = 1.157552621e+10 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0005206717178, 4.498039296e-14 MLMG: Timers: Solve = 0.207754256 Iter = 0.204924931 Bottom = 0.117040894 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :2.332706546 seconds MAC Proj :0.417005331 seconds Nodal Proj :0.249022303 seconds Reactions :0.214756948 seconds Misc :0.086322582 seconds Base State :0.00276474 seconds Time to advance time step: 3.299929848 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.858884632 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1308193.213 MLMG: Initial residual (resid0) = 1308193.213 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001228774199, 9.392910676e-11 MLMG: Timers: Solve = 0.209509535 Iter = 0.207186612 Bottom = 0.158243071 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1308193.247 MLMG: Initial residual (resid0) = 0.9819740953 MLMG: Final Iter. 4 resid, resid/bnorm = 3.557289165e-05, 2.719238288e-11 MLMG: Timers: Solve = 0.113381364 Iter = 0.111019724 Bottom = 0.086283597 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5488884.015 MLMG: Initial residual (resid0) = 5488884.015 MLMG: Final Iter. 8 resid, resid/bnorm = 2.475216547e-07, 4.509507835e-14 MLMG: Timers: Solve = 0.207512145 Iter = 0.204733472 Bottom = 0.116962832 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :2.278088141 seconds MAC Proj :0.371266415 seconds Nodal Proj :0.247266934 seconds Reactions :0.214611811 seconds Misc :0.080478447 seconds Base State :0.002884259 seconds Time to advance time step: 3.191863511 Writing plotfile 1 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.867933727 Call to estdt for level 0 gives dt_lev = 0.2012294724 Minimum estdt over all levels = 0.2012294724 Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1417785.252 MLMG: Initial residual (resid0) = 1417785.252 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001335713023, 9.421123692e-11 MLMG: Timers: Solve = 0.206232346 Iter = 0.203859301 Bottom = 0.155013141 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1417789.529 MLMG: Initial residual (resid0) = 60994.35243 MLMG: Final Iter. 6 resid, resid/bnorm = 3.04971868e-05, 2.151037666e-11 MLMG: Timers: Solve = 0.16328382 Iter = 0.160939032 Bottom = 0.124123337 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6063790.017 MLMG: Initial residual (resid0) = 6063790.017 MLMG: Final Iter. 8 resid, resid/bnorm = 4.279461382e-07, 7.057403653e-14 MLMG: Timers: Solve = 0.199000008 Iter = 0.196239204 Bottom = 0.10850287 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653 Timing summary: Advection :2.2719702 seconds MAC Proj :0.417692755 seconds Nodal Proj :0.238023749 seconds Reactions :0.206215508 seconds Misc :0.070619683 seconds Base State :0.003798282 seconds Time to advance time step: 3.204653716 Writing plotfile 2 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.856920901 Call to estdt for level 0 gives dt_lev = 0.2012849721 Minimum estdt over all levels = 0.2012849721 Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1588645.934 MLMG: Initial residual (resid0) = 1588645.934 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001502820232, 9.459755636e-11 MLMG: Timers: Solve = 0.21929425 Iter = 0.2169378 Bottom = 0.168084773 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1588650.64 MLMG: Initial residual (resid0) = 22571.20547 MLMG: Final Iter. 6 resid, resid/bnorm = 3.305249675e-05, 2.080539039e-11 MLMG: Timers: Solve = 0.144527392 Iter = 0.14216643 Bottom = 0.10527046 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6670311.018 MLMG: Initial residual (resid0) = 6670311.018 MLMG: Final Iter. 8 resid, resid/bnorm = 4.717076183e-07, 7.071748484e-14 MLMG: Timers: Solve = 0.199382738 Iter = 0.196535608 Bottom = 0.108640939 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118 Timing summary: Advection :2.271978211 seconds MAC Proj :0.41194168 seconds Nodal Proj :0.23966295 seconds Reactions :0.205685659 seconds Misc :0.071797016 seconds Base State :0.004270436 seconds Time to advance time step: 3.201206548 Writing plotfile 3 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.855066227 Total Time: 54.95133258 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 6) :: [2, 2, 2, 2, 2, 2] [TOP]::system.regtest_reduction(nvals = 1) :: [1] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 7946 [The Arena] space (MB): 9049 [The Device Arena] space (MB): 8 [The Managed Arena] space (MB): 8 [The Pinned Arena] space (MB): 8 AMReX (20.01-59-g1b8a5df28a28) finalized