Initializing CUDA...
CUDA initialized with 1 GPU
AMReX (20.01-124-gcb13a92a7dea) initialized
Calling Setup()
Calling ReadParameters()
WARNING: burning_cutoff_density_lo not supplied in the inputs file
WARNING: setting burning_cutoff_density_lo = base_cutoff_density
reading extern runtime parameters ...
ERROR: problem in the namelist
Calling VariableSetup()
Calling set_method_params()
Calling BCSetup()
Calling init_base_state_geometry()
Calling Init()
Calling InitData()
------------------------------------------------------------------------------
cutoff densities:
low density cutoff (for mapping the model) = 0.1000000000E-09
buoyancy cutoff density
(for zeroing rho - rho_0, centrifugal term) = 0.5000000000E-09
anelastic cutoff = 0.1000000000E-09
------------------------------------------------------------------------------
Maximum HSE Error = 4.5474735088667091E-013
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
------------------------------------------------------------------------------
Writing plotfile RT_pltInitData after InitData
Time to write plotfile: 0.084111119
Doing initial projection
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.00352066 Iter = 0 Bottom = 0
Done calling nodal solver
Writing plotfile RT_pltafter_InitProj after InitProj
Time to write plotfile: 0.072620513
Call to firstdt for level 0 gives dt_lev = 0.000608983586
Multiplying dt_lev by init_shrink; dt_lev = 6.08983586e-05
Minimum firstdt over all levels = 6.08983586e-05
Doing initial divu iteration #1
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.003572362 Iter = 0 Bottom = 0
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.08660444773
Minimum estdt over all levels = 0.08660444773
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.08660444773
Multiplying dt by init_shrink; dt = 0.008660444773
Ignoring this new dt since it's larger than the previous dt = 6.08983586e-05
Writing plotfile RT_pltafter_DivuIter after final DivuIter
Time to write plotfile: 0.069190192
Doing initial pressure iteration #1
Timestep 0 starts with TIME = 0 DT = 6.08983586e-05
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 0.002421164472
MLMG: Initial residual (resid0) = 0.002421164472
MLMG: Final Iter. 9 resid, resid/bnorm = 1.751907791e-13, 7.235806619e-11
MLMG: Timers: Solve = 0.070444735 Iter = 0.068125015 Bottom = 0.017461826
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 0.002421205691
MLMG: Initial residual (resid0) = 2.151449932e-06
MLMG: Final Iter. 7 resid, resid/bnorm = 9.927909287e-14, 4.100398955e-11
MLMG: Timers: Solve = 0.054207502 Iter = 0.051933302 Bottom = 0.012622846
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 58.12657035
MLMG: Initial residual (resid0) = 58.12657035
MLMG: Final Iter. 9 resid, resid/bnorm = 9.743317264e-12, 1.676224351e-13
MLMG: Timers: Solve = 0.096095543 Iter = 0.094119596 Bottom = 0.016638928
Done calling nodal solver
Timestep 0 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05
Timing summary:
Advection :0.174197543 seconds
MAC Proj :0.137697793 seconds
Nodal Proj :0.107096295 seconds
Reactions :0.010588356 seconds
Misc :0.009766144 seconds
Base State :0.001935489 seconds
Time to advance time step: 0.439474725
Writing plotfile 0 after all initialization
Time to write plotfile: 0.119118319
Calling Evolve()
Timestep 1 starts with TIME = 0 DT = 6.08983586e-05
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 2.394238647e-05
MLMG: Initial residual (resid0) = 2.394238647e-05
MLMG: Final Iter. 9 resid, resid/bnorm = 3.187630974e-16, 1.331375624e-11
MLMG: Timers: Solve = 0.070333387 Iter = 0.068171882 Bottom = 0.017873664
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 2.394218844e-05
MLMG: Initial residual (resid0) = 1.928374365e-06
MLMG: Final Iter. 9 resid, resid/bnorm = 6.036520059e-16, 2.521290012e-11
MLMG: Timers: Solve = 0.06786743 Iter = 0.065764481 Bottom = 0.015507224
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.003539812449
MLMG: Initial residual (resid0) = 0.003539812449
MLMG: Final Iter. 9 resid, resid/bnorm = 6.135500094e-16, 1.733283947e-13
MLMG: Timers: Solve = 0.095624045 Iter = 0.093709826 Bottom = 0.016532923
Done calling nodal solver
Timestep 1 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05
Timing summary:
Advection :0.176977815 seconds
MAC Proj :0.150025538 seconds
Nodal Proj :0.107138544 seconds
Reactions :0.010755917 seconds
Misc :0.011166422 seconds
Base State :0.001779174 seconds
Time to advance time step: 0.456187335
Call to estdt for level 0 gives dt_lev = 0.3128878797
Minimum estdt over all levels = 0.3128878797
Timestep 2 starts with TIME = 6.08983586e-05 DT = 6.698819446e-05
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 3.050043586e-05
MLMG: Initial residual (resid0) = 3.050043586e-05
MLMG: Final Iter. 9 resid, resid/bnorm = 2.284815048e-15, 7.491089827e-11
MLMG: Timers: Solve = 0.06970999 Iter = 0.067529222 Bottom = 0.0171337
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 3.059063412e-05
MLMG: Initial residual (resid0) = 5.66083759e-06
MLMG: Final Iter. 10 resid, resid/bnorm = 4.89262324e-16, 1.599386015e-11
MLMG: Timers: Solve = 0.075543027 Iter = 0.073438291 Bottom = 0.0174671
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.003894013591
MLMG: Initial residual (resid0) = 0.003894013591
MLMG: Final Iter. 9 resid, resid/bnorm = 6.664590754e-16, 1.711496531e-13
MLMG: Timers: Solve = 0.095678003 Iter = 0.093703422 Bottom = 0.016534808
Done calling nodal solver
Timestep 2 ends with TIME = 0.0001278865531 DT = 6.698819446e-05
Timing summary:
Advection :0.165235961 seconds
MAC Proj :0.157381725 seconds
Nodal Proj :0.105306945 seconds
Reactions :0.009405724 seconds
Misc :0.006896919 seconds
Base State :0.00183051 seconds
Time to advance time step: 0.444349971
Call to estdt for level 0 gives dt_lev = 0.3130286362
Minimum estdt over all levels = 0.3130286362
Timestep 3 starts with TIME = 0.0001278865531 DT = 7.368701391e-05
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 3.168800512e-05
MLMG: Initial residual (resid0) = 3.168800512e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 5.650713492e-16, 1.783234215e-11
MLMG: Timers: Solve = 0.076451777 Iter = 0.074357365 Bottom = 0.018420064
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 3.178722338e-05
MLMG: Initial residual (resid0) = 1.012935749e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 6.833624649e-16, 2.149802318e-11
MLMG: Timers: Solve = 0.075658793 Iter = 0.073514331 Bottom = 0.017429399
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.004283414244
MLMG: Initial residual (resid0) = 0.004283414244
MLMG: Final Iter. 9 resid, resid/bnorm = 7.346553921e-16, 1.715116377e-13
MLMG: Timers: Solve = 0.095642125 Iter = 0.0937232 Bottom = 0.016594919
Done calling nodal solver
Timestep 3 ends with TIME = 0.000201573567 DT = 7.368701391e-05
Timing summary:
Advection :0.161829218 seconds
MAC Proj :0.164221821 seconds
Nodal Proj :0.105983634 seconds
Reactions :0.00822832 seconds
Misc :0.007346243 seconds
Base State :0.002134811 seconds
Time to advance time step: 0.447748936
Call to estdt for level 0 gives dt_lev = 0.3130285358
Minimum estdt over all levels = 0.3130285358
Timestep 4 starts with TIME = 0.000201573567 DT = 8.10557153e-05
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 3.570538737e-05
MLMG: Initial residual (resid0) = 3.570538737e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 7.571110825e-16, 2.120439346e-11
MLMG: Timers: Solve = 0.076427736 Iter = 0.074279236 Bottom = 0.018407377
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 3.581452755e-05
MLMG: Initial residual (resid0) = 1.504387741e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 8.870137494e-16, 2.476687004e-11
MLMG: Timers: Solve = 0.076052925 Iter = 0.073958848 Bottom = 0.017616252
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.004711755907
MLMG: Initial residual (resid0) = 0.004711755907
MLMG: Final Iter. 9 resid, resid/bnorm = 8.062127355e-16, 1.711066429e-13
MLMG: Timers: Solve = 0.095645402 Iter = 0.093679725 Bottom = 0.01658277
Done calling nodal solver
Timestep 4 ends with TIME = 0.0002826292823 DT = 8.10557153e-05
Timing summary:
Advection :0.164883739 seconds
MAC Proj :0.165968015 seconds
Nodal Proj :0.105527477 seconds
Reactions :0.009644481 seconds
Misc :0.008795547 seconds
Base State :0.002232083 seconds
Time to advance time step: 0.454935546
Call to estdt for level 0 gives dt_lev = 0.313028505
Minimum estdt over all levels = 0.313028505
Timestep 5 starts with TIME = 0.0002826292823 DT = 8.916128683e-05
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 4.013180326e-05
MLMG: Initial residual (resid0) = 4.013180326e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 9.68139177e-16, 2.412398891e-11
MLMG: Timers: Solve = 0.076477761 Iter = 0.074373511 Bottom = 0.01827466
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 4.025185749e-05
MLMG: Initial residual (resid0) = 2.044985444e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 1.111036176e-15, 2.760210946e-11
MLMG: Timers: Solve = 0.07540312 Iter = 0.073278391 Bottom = 0.017437055
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.005182931902
MLMG: Initial residual (resid0) = 0.005182931902
MLMG: Final Iter. 9 resid, resid/bnorm = 8.82323728e-16, 1.702364115e-13
MLMG: Timers: Solve = 0.095580687 Iter = 0.093619397 Bottom = 0.016612389
Done calling nodal solver
Timestep 5 ends with TIME = 0.0003717905691 DT = 8.916128683e-05
Timing summary:
Advection :0.160193899 seconds
MAC Proj :0.163973504 seconds
Nodal Proj :0.106727379 seconds
Reactions :0.008730477 seconds
Misc :0.007690917 seconds
Base State :0.00197648 seconds
Time to advance time step: 0.447452121
Writing plotfile 5
Time to write plotfile: 0.077192033
Total Time: 3.397489871
Unused ParmParse Variables:
[TOP]::maestro.v(nvals = 1) :: [1]
[TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2]
[TOP]::amr.check_file(nvals = 1) :: [RT_chk]
[TOP]::amr.checkpoint_files_output(nvals = 1) :: [0]
Total GPU global memory (MB): 12066
Free GPU global memory (MB): 10287
[The Arena] space (MB): 9049
[The Device Arena] space (MB): 8
[The Managed Arena] space (MB): 8
[The Pinned Arena] space (MB): 8
AMReX (20.01-124-gcb13a92a7dea) finalized