Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.02-30-gb6da11ba5e44) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Calling set_method_params() Initializing Helmholtz EOS and using Coulomb corrections. Calling BCSetup() Calling init_base_state_geometry() Calling Init() Calling InitData() ------------------------------------------------------------------------------ reading initial model 640 points found in the initial model file 6 variables found in the initial model file ------------------------------------------------------------------------------ model file mapping, level: 0 dr of MAESTRO base state = 562500.0000 dr of input file data = 562500.0000 maximum radius (cell-centered) of input model = 359718750.0 setting r_cutoff to 365 radius at r_cutoff 205593750.0000000 Maximum HSE Error = 0.6051370840E-04 (after putting initial model into base state arrays, and for density < base_cutoff_density) ------------------------------------------------------------------------------ Writing plotfile reacting_bubble-3d_pltInitData after InitData inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.887811928 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.017320006 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.804235704 Call to firstdt for level 0 gives dt_lev = 0.0004741795139 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139 Minimum firstdt over all levels = 0.0004741795139 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 2054.812696 MLMG: Initial residual (resid0) = 2054.812696 MLMG: Final Iter. 8 resid, resid/bnorm = 7.963762982e-11, 3.875663703e-14 MLMG: Timers: Solve = 0.244256067 Iter = 0.230269224 Bottom = 0.130190093 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1719927642 Minimum estdt over all levels = 0.1719927642 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642 Multiplying dt by init_shrink; dt = 0.1719927642 Ignoring this new dt since it's larger than the previous dt = 0.0004741795139 Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.784340132 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2728630.345 MLMG: Initial residual (resid0) = 2728630.345 MLMG: Final Iter. 9 resid, resid/bnorm = 1.57370232e-05, 5.767370884e-12 MLMG: Timers: Solve = 0.234728758 Iter = 0.227412317 Bottom = 0.169331218 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2728626.155 MLMG: Initial residual (resid0) = 8729.505838 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0002248486853, 8.24036246e-11 MLMG: Timers: Solve = 0.137029423 Iter = 0.134550225 Bottom = 0.102536449 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.157552621e+10 MLMG: Initial residual (resid0) = 1.157552621e+10 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0005213693948, 4.50406647e-14 MLMG: Timers: Solve = 0.219461477 Iter = 0.216616592 Bottom = 0.126488011 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.439061916 seconds MAC Proj :0.428737311 seconds Nodal Proj :0.260483866 seconds Reactions :0.212879178 seconds Misc :0.090206359 seconds Base State :0.003171767 seconds Time to advance time step: 1.431494108 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.850790297 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1308193.213 MLMG: Initial residual (resid0) = 1308193.213 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001239967096, 9.478470642e-11 MLMG: Timers: Solve = 0.223289084 Iter = 0.220597947 Bottom = 0.169402252 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1308193.247 MLMG: Initial residual (resid0) = 0.9819741587 MLMG: Final Iter. 4 resid, resid/bnorm = 3.557560558e-05, 2.719445745e-11 MLMG: Timers: Solve = 0.12048204 Iter = 0.118033031 Bottom = 0.092251696 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5488884.015 MLMG: Initial residual (resid0) = 5488884.015 MLMG: Final Iter. 8 resid, resid/bnorm = 2.466075557e-07, 4.492854195e-14 MLMG: Timers: Solve = 0.220618876 Iter = 0.217722136 Bottom = 0.127477433 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.385803643 seconds MAC Proj :0.392452997 seconds Nodal Proj :0.261892365 seconds Reactions :0.21370515 seconds Misc :0.083802494 seconds Base State :0.003800496 seconds Time to advance time step: 1.337793201 Writing plotfile 1 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.806013231 Call to estdt for level 0 gives dt_lev = 0.2012294724 Minimum estdt over all levels = 0.2012294724 Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1417785.252 MLMG: Initial residual (resid0) = 1417785.252 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001354294945, 9.552186719e-11 MLMG: Timers: Solve = 0.22416629 Iter = 0.221662395 Bottom = 0.170482613 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1417789.529 MLMG: Initial residual (resid0) = 60994.35243 MLMG: Final Iter. 6 resid, resid/bnorm = 3.048223653e-05, 2.149983188e-11 MLMG: Timers: Solve = 0.174734946 Iter = 0.172277984 Bottom = 0.133953096 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6063790.017 MLMG: Initial residual (resid0) = 6063790.017 MLMG: Final Iter. 8 resid, resid/bnorm = 4.240651125e-07, 6.993400353e-14 MLMG: Timers: Solve = 0.211266559 Iter = 0.208406415 Bottom = 0.118052489 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653 Timing summary: Advection :0.380753678 seconds MAC Proj :0.447485805 seconds Nodal Proj :0.252416969 seconds Reactions :0.206145119 seconds Misc :0.072314032 seconds Base State :0.003017673 seconds Time to advance time step: 1.359265758 Writing plotfile 2 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.806035164 Call to estdt for level 0 gives dt_lev = 0.2012849721 Minimum estdt over all levels = 0.2012849721 Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1588645.934 MLMG: Initial residual (resid0) = 1588645.934 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001487284753, 9.36196494e-11 MLMG: Timers: Solve = 0.211201609 Iter = 0.208745722 Bottom = 0.157645481 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1588650.64 MLMG: Initial residual (resid0) = 22571.20547 MLMG: Final Iter. 6 resid, resid/bnorm = 3.305002065e-05, 2.080383177e-11 MLMG: Timers: Solve = 0.154050385 Iter = 0.151564105 Bottom = 0.113217898 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6670311.018 MLMG: Initial residual (resid0) = 6670311.018 MLMG: Final Iter. 8 resid, resid/bnorm = 4.677183645e-07, 7.011942369e-14 MLMG: Timers: Solve = 0.211307383 Iter = 0.208372624 Bottom = 0.118155485 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118 Timing summary: Advection :0.379061875 seconds MAC Proj :0.413810604 seconds Nodal Proj :0.253596396 seconds Reactions :0.205475746 seconds Misc :0.072209526 seconds Base State :0.003336128 seconds Time to advance time step: 1.324310386 Writing plotfile 3 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.807731325 Total Time: 48.58234289 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 6) :: [2, 2, 2, 2, 2, 2] [TOP]::system.regtest_reduction(nvals = 1) :: [1] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 7942 [The Arena] space (MB): 9049 [The Device Arena] space (MB): 8 [The Managed Arena] space (MB): 8 [The Pinned Arena] space (MB): 8 AMReX (20.02-30-gb6da11ba5e44) finalized