Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.02-316-gf97cf7053ad1) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Calling set_method_params() Initializing Helmholtz EOS and using Coulomb corrections. Calling BCSetup() Calling init_base_state_geometry() Calling InitBaseStateGeometry() Calling Init() Calling InitData() ------------------------------------------------------------------------------ reading initial model 640 points found in the initial model file 6 variables found in the initial model file ------------------------------------------------------------------------------ model file mapping, level: 0 dr of MAESTRO base state = 562500.0000 dr of input file data = 562500.0000 maximum radius (cell-centered) of input model = 359718750.0 setting r_cutoff to 365 radius at r_cutoff 205593750.0000000 Maximum HSE Error = 0.6051370840E-04 (after putting initial model into base state arrays, and for density < base_cutoff_density) ------------------------------------------------------------------------------ ------------------------------------------------------------------------------ model file mapping, level: 1 dr of MAESTRO base state = 281250.0000 dr of input file data = 562500.0000 maximum radius (cell-centered) of input model = 359718750.0 setting r_cutoff to 729 radius at r_cutoff 205171875.0000000 Maximum HSE Error = 0.5009359532 (after putting initial model into base state arrays, and for density < base_cutoff_density) ------------------------------------------------------------------------------ Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.244628673 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.013467925 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.222204403 Call to firstdt for level 0 gives dt_lev = 0.0004741795922 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922 Call to firstdt for level 1 gives dt_lev = 0.0002743178815 Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815 Minimum firstdt over all levels = 0.0002743178815 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 9701.829892 MLMG: Initial residual (resid0) = 9701.829892 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0003239296374, 3.338850928e-08 MLMG: Timers: Solve = 0.428366997 Iter = 0.415942233 Bottom = 0.001907588 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1641628699 Call to estdt for level 1 gives dt_lev = 0.1158500464 Minimum estdt over all levels = 0.1158500464 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500464 Multiplying dt by init_shrink; dt = 0.1158500464 Ignoring this new dt since it's larger than the previous dt = 0.0002743178815 Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.218643657 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1769558.576 MLMG: Initial residual (resid0) = 1769558.576 MLMG: Final Iter. 7 resid, resid/bnorm = 0.001462596126, 8.265316253e-10 MLMG: Timers: Solve = 0.107585594 Iter = 0.101319707 Bottom = 0.017793434 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1769558.576 MLMG: Initial residual (resid0) = 0.8873402195 MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002626020578, 1.483997542e-10 MLMG: Timers: Solve = 0.052749952 Iter = 0.047838553 Bottom = 0.008272934 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.293089834e+10 MLMG: Initial residual (resid0) = 1.293089834e+10 MLMG: Final Iter. 9 resid, resid/bnorm = 0.05351257324, 4.138349235e-12 MLMG: Timers: Solve = 0.769790592 Iter = 0.752967517 Bottom = 0.004094416 Done calling nodal solver Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.381793077 seconds MAC Proj :0.191034726 seconds Nodal Proj :0.827642639 seconds Reactions :0.064151187 seconds Misc :0.041675601 seconds Base State :0.013841457 seconds Time to advance time step: 1.506549101 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.212690465 Writing checkpoint 0 after all initialization Writing checkpoint reacting_bubble_2d_chk0000000 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 484084.2315 MLMG: Initial residual (resid0) = 484084.2315 MLMG: Final Iter. 7 resid, resid/bnorm = 3.840815862e-05, 7.93418916e-11 MLMG: Timers: Solve = 0.10749249 Iter = 0.102559336 Bottom = 0.017589259 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 484084.2315 MLMG: Initial residual (resid0) = 0.8687138054 MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002689003927, 5.55482652e-10 MLMG: Timers: Solve = 0.052762412 Iter = 0.047799704 Bottom = 0.00779669 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3547177.966 MLMG: Initial residual (resid0) = 3547177.966 MLMG: Final Iter. 9 resid, resid/bnorm = 1.471862197e-05, 4.149389208e-12 MLMG: Timers: Solve = 0.764180023 Iter = 0.748966058 Bottom = 0.003891367 Done calling nodal solver Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.374428329 seconds MAC Proj :0.19399963 seconds Nodal Proj :0.820748166 seconds Reactions :0.068762447 seconds Misc :0.043553788 seconds Base State :0.012003825 seconds Time to advance time step: 1.501798168 Call to estdt for level 0 gives dt_lev = 0.2285173763 Call to estdt for level 1 gives dt_lev = 0.1613607516 Minimum estdt over all levels = 0.1613607516 Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 709086.9175 MLMG: Initial residual (resid0) = 709086.9175 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005383082351, 7.591569126e-10 MLMG: Timers: Solve = 0.093806781 Iter = 0.088800368 Bottom = 0.015596445 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 709086.9177 MLMG: Initial residual (resid0) = 2.662291101 MLMG: Final Iter. 4 resid, resid/bnorm = 7.430420073e-05, 1.047885652e-10 MLMG: Timers: Solve = 0.07958329 Iter = 0.074747815 Bottom = 0.011061941 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3.168331744e+11 MLMG: Initial residual (resid0) = 3.168331744e+11 MLMG: Final Iter. 10 resid, resid/bnorm = 1.639431, 5.174429739e-12 MLMG: Timers: Solve = 0.848362595 Iter = 0.833830177 Bottom = 0.004438647 Done calling nodal solver Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696 Timing summary: Advection :0.388856951 seconds MAC Proj :0.203428933 seconds Nodal Proj :0.901899522 seconds Reactions :0.81015449 seconds Misc :0.031850431 seconds Base State :0.014760805 seconds Time to advance time step: 2.336494609 Time to regrid: 0.031240309 Call to estdt for level 0 gives dt_lev = 0.0003214052698 Call to estdt for level 1 gives dt_lev = 0.0003214052698 Minimum estdt over all levels = 0.0003214052698 Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003214052698 Cell Count: Level 0, 245760 cells Level 1, 86016 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 8.705477614e+11 MLMG: Initial residual (resid0) = 8.705477614e+11 MLMG: Final Iter. 8 resid, resid/bnorm = 246.257754, 2.828767874e-10 MLMG: Timers: Solve = 0.119516988 Iter = 0.114435834 Bottom = 0.016133779 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 4.974080235e+11 MLMG: Initial residual (resid0) = 1.154117508e+12 MLMG: Final Iter. 8 resid, resid/resid0 = 118.5718319, 1.02738093e-10 MLMG: Timers: Solve = 0.122794877 Iter = 0.117890773 Bottom = 0.019492062 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 4.052239465e+11 MLMG: Initial residual (resid0) = 4.052239465e+11 MLMG: Final Iter. 10 resid, resid/bnorm = 1.636000965, 4.037276126e-12 MLMG: Timers: Solve = 0.866583962 Iter = 0.849851839 Bottom = 0.004164048 Done calling nodal solver Timestep 3 ends with TIME = 0.0008974728209 DT = 0.0003214052698 Timing summary: Advection :0.375239365 seconds MAC Proj :0.272553015 seconds Nodal Proj :0.924374072 seconds Reactions :1.011312862 seconds Misc :0.033239169 seconds Base State :0.011986777 seconds Time to advance time step: 2.617071415 Writing plotfile 3 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.326789995 Writing checkpoint 3 Writing checkpoint reacting_bubble_2d_chk0000003 Total Time: 21.08005826 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10006 [The Arena] space (MB): 9049 [The Device Arena] space (MB): 8 [The Managed Arena] space (MB): 8 [The Pinned Arena] space (MB): 8 AMReX (20.02-316-gf97cf7053ad1) finalized