Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.02-404-g433143b8cfa6) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Calling set_method_params() Initializing Helmholtz EOS and using Coulomb corrections. Calling BCSetup() Calling init_base_state_geometry() Calling InitBaseStateGeometry() Calling Init() Calling InitData() ------------------------------------------------------------------------------ reading initial model 640 points found in the initial model file 6 variables found in the initial model file ------------------------------------------------------------------------------ model file mapping, level: 0 dr of MAESTRO base state = 562500.0000 dr of input file data = 562500.0000 maximum radius (cell-centered) of input model = 359718750.0 setting r_cutoff to 365 radius at r_cutoff 205593750.0000000 Maximum HSE Error = 0.6051370840E-04 (after putting initial model into base state arrays, and for density < base_cutoff_density) ------------------------------------------------------------------------------ Writing plotfile reacting_bubble-3d_pltInitData after InitData inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.862065912 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.071078237 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.830194301 Call to firstdt for level 0 gives dt_lev = 0.0004741795139 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139 Minimum firstdt over all levels = 0.0004741795139 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 2054.812696 MLMG: Initial residual (resid0) = 2054.812696 MLMG: Final Iter. 7 resid, resid/bnorm = 3.680860061e-10, 1.791336051e-13 MLMG: Timers: Solve = 3.643560553 Iter = 3.575450316 Bottom = 0.027714637 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1719927642 Minimum estdt over all levels = 0.1719927642 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642 Multiplying dt by init_shrink; dt = 0.1719927642 Ignoring this new dt since it's larger than the previous dt = 0.0004741795139 Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.784717224 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2728631.974 MLMG: Initial residual (resid0) = 2728631.974 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0002603689209, 9.542104739e-11 MLMG: Timers: Solve = 0.211365872 Iter = 0.20443712 Bottom = 0.154652782 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2728631.974 MLMG: Initial residual (resid0) = 8.815143313 MLMG: Final Iter. 4 resid, resid/bnorm = 0.0002026579245, 7.427088977e-11 MLMG: Timers: Solve = 0.096939526 Iter = 0.094861807 Bottom = 0.070217496 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.157554389e+10 MLMG: Initial residual (resid0) = 1.157554389e+10 MLMG: Final Iter. 7 resid, resid/bnorm = 0.002930760384, 2.531855445e-13 MLMG: Timers: Solve = 3.632089973 Iter = 3.549852375 Bottom = 0.029064316 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.320092278 seconds MAC Proj :0.330195917 seconds Nodal Proj :3.759633711 seconds Reactions :0.2180152 seconds Misc :0.093289678 seconds Base State :0.009490177 seconds Time to advance time step: 4.72136659 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.820731236 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1308380.192 MLMG: Initial residual (resid0) = 1308380.192 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001216451783, 9.297387645e-11 MLMG: Timers: Solve = 0.213410258 Iter = 0.211327053 Bottom = 0.162461801 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1308380.192 MLMG: Initial residual (resid0) = 6.595796293 MLMG: Final Iter. 5 resid, resid/bnorm = 1.667226881e-05, 1.274267901e-11 MLMG: Timers: Solve = 0.123774394 Iter = 0.121611428 Bottom = 0.090811989 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5488892.554 MLMG: Initial residual (resid0) = 5488892.554 MLMG: Final Iter. 7 resid, resid/bnorm = 1.361127943e-06, 2.479786094e-13 MLMG: Timers: Solve = 3.479556707 Iter = 3.40516842 Bottom = 0.027974404 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.28771576 seconds MAC Proj :0.349219317 seconds Nodal Proj :3.597422045 seconds Reactions :0.217125067 seconds Misc :0.08634329 seconds Base State :0.008051606 seconds Time to advance time step: 4.537972299 Call to estdt for level 0 gives dt_lev = 0.201230266 Minimum estdt over all levels = 0.201230266 Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1426182.679 MLMG: Initial residual (resid0) = 1426182.679 MLMG: Final Iter. 9 resid, resid/bnorm = 4.358687411e-05, 3.056191521e-11 MLMG: Timers: Solve = 0.247659838 Iter = 0.245571813 Bottom = 0.190318822 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1426293.931 MLMG: Initial residual (resid0) = 36466.31286 MLMG: Final Iter. 9 resid, resid/bnorm = 1.940083221e-05, 1.360226794e-11 MLMG: Timers: Solve = 0.232528796 Iter = 0.230368255 Bottom = 0.17532117 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6063477.366 MLMG: Initial residual (resid0) = 6063477.366 MLMG: Final Iter. 7 resid, resid/bnorm = 3.812422923e-05, 6.287519014e-12 MLMG: Timers: Solve = 3.512053627 Iter = 3.436166989 Bottom = 0.02942709 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653 Timing summary: Advection :0.261854581 seconds MAC Proj :0.492339438 seconds Nodal Proj :3.634909859 seconds Reactions :0.211378093 seconds Misc :0.066761581 seconds Base State :0.008502326 seconds Time to advance time step: 4.66742021 Call to estdt for level 0 gives dt_lev = 0.20126596 Minimum estdt over all levels = 0.20126596 Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1597712.638 MLMG: Initial residual (resid0) = 1597712.638 MLMG: Final Iter. 10 resid, resid/bnorm = 4.328079106e-05, 2.70892212e-11 MLMG: Timers: Solve = 0.247033221 Iter = 0.244942702 Bottom = 0.183566445 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1597945.471 MLMG: Initial residual (resid0) = 56992.17406 MLMG: Final Iter. 9 resid, resid/bnorm = 3.338419548e-05, 2.089194913e-11 MLMG: Timers: Solve = 0.239444636 Iter = 0.237264133 Bottom = 0.182179511 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6669975.272 MLMG: Initial residual (resid0) = 6669975.272 MLMG: Final Iter. 8 resid, resid/bnorm = 3.107566316e-05, 4.659037237e-12 MLMG: Timers: Solve = 3.959962238 Iter = 3.884553937 Bottom = 0.032211168 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118 Timing summary: Advection :0.264891959 seconds MAC Proj :0.498733135 seconds Nodal Proj :4.080672128 seconds Reactions :0.213297843 seconds Misc :0.068508271 seconds Base State :0.007956394 seconds Time to advance time step: 5.126260744 Writing plotfile 3 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.835591988 Total Time: 62.89737253 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::system.regtest_reduction(nvals = 1) :: [1] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 7955 [The Arena] space (MB): 9049 [The Device Arena] space (MB): 8 [The Managed Arena] space (MB): 8 [The Pinned Arena] space (MB): 8 AMReX (20.02-404-g433143b8cfa6) finalized