Initializing CUDA...
CUDA initialized with 1 GPU
AMReX (20.03-42-g90854ff447f4) initialized
Calling Setup()
Calling ReadParameters()
WARNING: burning_cutoff_density_lo not supplied in the inputs file
WARNING: setting burning_cutoff_density_lo = base_cutoff_density
reading extern runtime parameters ...
ERROR: problem in the namelist
Calling VariableSetup()
Calling set_method_params()
Calling BCSetup()
Calling init_base_state_geometry()
Calling InitBaseStateGeometry()
Calling Init()
Calling InitData()
------------------------------------------------------------------------------
cutoff densities:
low density cutoff (for mapping the model) = 0.1000000000E-09
buoyancy cutoff density
(for zeroing rho - rho_0, centrifugal term) = 0.5000000000E-09
anelastic cutoff = 0.1000000000E-09
------------------------------------------------------------------------------
Maximum HSE Error = 4.5474735088667091E-013
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
------------------------------------------------------------------------------
Writing plotfile RT_pltInitData after InitData
Time to write plotfile: 0.093726496
Doing initial projection
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.004518269 Iter = 0 Bottom = 0
Done calling nodal solver
Writing plotfile RT_pltafter_InitProj after InitProj
Time to write plotfile: 0.068069429
Call to firstdt for level 0 gives dt_lev = 0.000608983586
Multiplying dt_lev by init_shrink; dt_lev = 6.08983586e-05
Minimum firstdt over all levels = 6.08983586e-05
Doing initial divu iteration #1
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.004291588 Iter = 0 Bottom = 0
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.08660444773
Minimum estdt over all levels = 0.08660444773
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.08660444773
Multiplying dt by init_shrink; dt = 0.008660444773
Ignoring this new dt since it's larger than the previous dt = 6.08983586e-05
Writing plotfile RT_pltafter_DivuIter after final DivuIter
Time to write plotfile: 0.064103021
Doing initial pressure iteration #1
Timestep 0 starts with TIME = 0 DT = 6.08983586e-05
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 0.002421164472
MLMG: Initial residual (resid0) = 0.002421164472
MLMG: Final Iter. 9 resid, resid/bnorm = 1.751907791e-13, 7.235806619e-11
MLMG: Timers: Solve = 0.07138084 Iter = 0.069369501 Bottom = 0.018961741
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 0.002421164472
MLMG: Initial residual (resid0) = 1.98624303e-06
MLMG: Final Iter. 7 resid, resid/bnorm = 2.697215979e-14, 1.114016008e-11
MLMG: Timers: Solve = 0.062760908 Iter = 0.060872874 Bottom = 0.016927584
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 58.12629965
MLMG: Initial residual (resid0) = 58.12629965
MLMG: Final Iter. 8 resid, resid/bnorm = 6.352252058e-12, 1.092836134e-13
MLMG: Timers: Solve = 0.285340117 Iter = 0.279663505 Bottom = 0.002100609
Done calling nodal solver
Timestep 0 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05
Timing summary:
Advection :0.101952664 seconds
MAC Proj :0.143836187 seconds
Nodal Proj :0.301846301 seconds
Reactions :0.008681666 seconds
Misc :0.008405957 seconds
Base State :0.006681459 seconds
Time to advance time step: 0.564871857
Writing plotfile 0 after all initialization
Time to write plotfile: 0.066019314
Calling Evolve()
Timestep 1 starts with TIME = 0 DT = 6.08983586e-05
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 2.394223808e-05
MLMG: Initial residual (resid0) = 2.394223808e-05
MLMG: Final Iter. 9 resid, resid/bnorm = 3.185044796e-16, 1.330303702e-11
MLMG: Timers: Solve = 0.072387639 Iter = 0.069874132 Bottom = 0.019509344
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 2.39832343e-05
MLMG: Initial residual (resid0) = 1.763119129e-06
MLMG: Final Iter. 9 resid, resid/bnorm = 1.659633793e-15, 6.9199749e-11
MLMG: Timers: Solve = 0.070170588 Iter = 0.068341283 Bottom = 0.017197553
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.003539812449
MLMG: Initial residual (resid0) = 0.003539812449
MLMG: Final Iter. 8 resid, resid/bnorm = 3.967095749e-16, 1.120707892e-13
MLMG: Timers: Solve = 0.284584704 Iter = 0.278242664 Bottom = 0.002042515
Done calling nodal solver
Timestep 1 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05
Timing summary:
Advection :0.106048118 seconds
MAC Proj :0.151391936 seconds
Nodal Proj :0.303829296 seconds
Reactions :0.007788528 seconds
Misc :0.008984006 seconds
Base State :0.007929655 seconds
Time to advance time step: 0.578185361
Call to estdt for level 0 gives dt_lev = 0.31288788
Minimum estdt over all levels = 0.31288788
Timestep 2 starts with TIME = 6.08983586e-05 DT = 6.698819446e-05
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 3.050043489e-05
MLMG: Initial residual (resid0) = 3.050043489e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 2.617762087e-15, 8.582704136e-11
MLMG: Timers: Solve = 0.07742274 Iter = 0.074967088 Bottom = 0.018922453
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 3.058937589e-05
MLMG: Initial residual (resid0) = 3.366923807e-06
MLMG: Final Iter. 9 resid, resid/bnorm = 1.158588684e-15, 3.787552541e-11
MLMG: Timers: Solve = 0.070578414 Iter = 0.068723613 Bottom = 0.017304202
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.003894011861
MLMG: Initial residual (resid0) = 0.003894011861
MLMG: Final Iter. 8 resid, resid/bnorm = 4.267419751e-16, 1.095892849e-13
MLMG: Timers: Solve = 0.283947521 Iter = 0.278752415 Bottom = 0.002295614
Done calling nodal solver
Timestep 2 ends with TIME = 0.0001278865531 DT = 6.698819446e-05
Timing summary:
Advection :0.103375757 seconds
MAC Proj :0.156947091 seconds
Nodal Proj :0.300810807 seconds
Reactions :0.008154976 seconds
Misc :0.00632438 seconds
Base State :0.008400936 seconds
Time to advance time step: 0.575772673
Call to estdt for level 0 gives dt_lev = 0.3130343744
Minimum estdt over all levels = 0.3130343744
Timestep 3 starts with TIME = 0.0001278865531 DT = 7.368701391e-05
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 3.949127335e-05
MLMG: Initial residual (resid0) = 3.949127335e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 3.868045913e-15, 9.794685218e-11
MLMG: Timers: Solve = 0.077459182 Iter = 0.074930666 Bottom = 0.018869859
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 3.959543626e-05
MLMG: Initial residual (resid0) = 3.067116402e-05
MLMG: Final Iter. 9 resid, resid/bnorm = 1.712528348e-15, 4.32506498e-11
MLMG: Timers: Solve = 0.069157834 Iter = 0.067298731 Bottom = 0.016950663
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.004283413245
MLMG: Initial residual (resid0) = 0.004283413245
MLMG: Final Iter. 8 resid, resid/bnorm = 4.729289876e-16, 1.10409377e-13
MLMG: Timers: Solve = 0.284354675 Iter = 0.279044427 Bottom = 0.002404434
Done calling nodal solver
Timestep 3 ends with TIME = 0.000201573567 DT = 7.368701391e-05
Timing summary:
Advection :0.101510433 seconds
MAC Proj :0.155500371 seconds
Nodal Proj :0.302974863 seconds
Reactions :0.007275968 seconds
Misc :0.006447279 seconds
Base State :0.007635016 seconds
Time to advance time step: 0.573871107
Call to estdt for level 0 gives dt_lev = 0.3130308685
Minimum estdt over all levels = 0.3130308685
Timestep 4 starts with TIME = 0.000201573567 DT = 8.10557153e-05
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 5.574344898e-05
MLMG: Initial residual (resid0) = 5.574344898e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 4.302205356e-15, 7.717867184e-11
MLMG: Timers: Solve = 0.077413878 Iter = 0.074923386 Bottom = 0.019030619
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 5.589648637e-05
MLMG: Initial residual (resid0) = 1.345171842e-05
MLMG: Final Iter. 9 resid, resid/bnorm = 4.871618517e-15, 8.715428882e-11
MLMG: Timers: Solve = 0.069621827 Iter = 0.067793549 Bottom = 0.017468146
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.004711754287
MLMG: Initial residual (resid0) = 0.004711754287
MLMG: Final Iter. 8 resid, resid/bnorm = 5.403663628e-16, 1.146847501e-13
MLMG: Timers: Solve = 0.28456256 Iter = 0.278535816 Bottom = 0.002316948
Done calling nodal solver
Timestep 4 ends with TIME = 0.0002826292823 DT = 8.10557153e-05
Timing summary:
Advection :0.103743145 seconds
MAC Proj :0.155993873 seconds
Nodal Proj :0.302658271 seconds
Reactions :0.008127038 seconds
Misc :0.006752013 seconds
Base State :0.009539145 seconds
Time to advance time step: 0.577421223
Call to estdt for level 0 gives dt_lev = 0.3130321007
Minimum estdt over all levels = 0.3130321007
Timestep 5 starts with TIME = 0.0002826292823 DT = 8.916128683e-05
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 7.37743533e-05
MLMG: Initial residual (resid0) = 7.37743533e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 5.760878333e-15, 7.80878188e-11
MLMG: Timers: Solve = 0.077483742 Iter = 0.074850563 Bottom = 0.018907046
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 7.362131872e-05
MLMG: Initial residual (resid0) = 1.342221244e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 8.599642816e-16, 1.168091385e-11
MLMG: Timers: Solve = 0.075596001 Iter = 0.073751953 Bottom = 0.017620689
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.005182753704
MLMG: Initial residual (resid0) = 0.005182753704
MLMG: Final Iter. 8 resid, resid/bnorm = 5.748439919e-16, 1.10914781e-13
MLMG: Timers: Solve = 0.287134046 Iter = 0.28185479 Bottom = 0.002385173
Done calling nodal solver
Timestep 5 ends with TIME = 0.0003717905691 DT = 8.916128683e-05
Timing summary:
Advection :0.105464663 seconds
MAC Proj :0.16206676 seconds
Nodal Proj :0.306427264 seconds
Reactions :0.006610773 seconds
Misc :0.006170113 seconds
Base State :0.01006852 seconds
Time to advance time step: 0.586942632
Writing plotfile 5
Time to write plotfile: 0.072144674
Total Time: 4.11904972
Unused ParmParse Variables:
[TOP]::maestro.v(nvals = 1) :: [1]
[TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2]
[TOP]::system.regtest_reduction(nvals = 1) :: [1]
[TOP]::amr.check_file(nvals = 1) :: [RT_chk]
[TOP]::amr.checkpoint_files_output(nvals = 1) :: [0]
Total GPU global memory (MB): 12066
Free GPU global memory (MB): 10292
[The Arena] space allocated (MB): 9049
[The Arena] space used (MB): 0
[The Device Arena] space allocated (MB): 8
[The Device Arena] space used (MB): 0
[The Managed Arena] space allocated (MB): 8
[The Managed Arena] space used (MB): 0
[The Pinned Arena] space allocated (MB): 8
[The Pinned Arena] space used (MB): 0
AMReX (20.03-42-g90854ff447f4) finalized