Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.03-42-g90854ff447f4) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling InitBaseStateGeometry() Calling Init() Calling InitData() ------------------------------------------------------------------------------ reading initial model 640 points found in the initial model file 6 variables found in the initial model file ------------------------------------------------------------------------------ model file mapping, level: 0 dr of MAESTRO base state = 562500.0000 dr of input file data = 562500.0000 maximum radius (cell-centered) of input model = 359718750.0 setting r_cutoff to 365 radius at r_cutoff 205593750.0000000 Maximum HSE Error = 0.6051370840E-04 (after putting initial model into base state arrays, and for density < base_cutoff_density) ------------------------------------------------------------------------------ Writing plotfile reacting_bubble-3d_pltInitData after InitData inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.792314022 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.070941981 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.755508641 Call to firstdt for level 0 gives dt_lev = 0.0004741795139 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139 Minimum firstdt over all levels = 0.0004741795139 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 2054.812696 MLMG: Initial residual (resid0) = 2054.812696 MLMG: Final Iter. 7 resid, resid/bnorm = 3.676809968e-10, 1.789365023e-13 MLMG: Timers: Solve = 3.446342814 Iter = 3.379120946 Bottom = 0.027475785 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1719927642 Minimum estdt over all levels = 0.1719927642 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642 Multiplying dt by init_shrink; dt = 0.1719927642 Ignoring this new dt since it's larger than the previous dt = 0.0004741795139 Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.735427628 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2728631.974 MLMG: Initial residual (resid0) = 2728631.974 MLMG: Final Iter. 9 resid, resid/bnorm = 1.638592221e-05, 6.005178553e-12 MLMG: Timers: Solve = 0.244860953 Iter = 0.238015019 Bottom = 0.180669799 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2728631.974 MLMG: Initial residual (resid0) = 8.815139083 MLMG: Final Iter. 5 resid, resid/bnorm = 3.240509072e-05, 1.187594774e-11 MLMG: Timers: Solve = 0.128867655 Iter = 0.126706605 Bottom = 0.095130211 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.157554389e+10 MLMG: Initial residual (resid0) = 1.157554389e+10 MLMG: Final Iter. 7 resid, resid/bnorm = 0.002917647362, 2.520527233e-13 MLMG: Timers: Solve = 3.457202842 Iter = 3.378742848 Bottom = 0.027807311 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.311861381 seconds MAC Proj :0.395825821 seconds Nodal Proj :3.567667449 seconds Reactions :0.191930224 seconds Misc :0.054673229 seconds Base State :0.01153076 seconds Time to advance time step: 4.522065311 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.791217645 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1308380.192 MLMG: Initial residual (resid0) = 1308380.192 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001169637399, 8.939583509e-11 MLMG: Timers: Solve = 0.239355986 Iter = 0.237179341 Bottom = 0.186880501 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1308380.192 MLMG: Initial residual (resid0) = 6.595801641 MLMG: Final Iter. 5 resid, resid/bnorm = 5.337376447e-05, 4.079377294e-11 MLMG: Timers: Solve = 0.129941238 Iter = 0.127804394 Bottom = 0.096182402 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5488892.554 MLMG: Initial residual (resid0) = 5488892.554 MLMG: Final Iter. 7 resid, resid/bnorm = 1.377775334e-06, 2.510115329e-13 MLMG: Timers: Solve = 3.458476821 Iter = 3.382845106 Bottom = 0.028223968 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.281623315 seconds MAC Proj :0.382219414 seconds Nodal Proj :3.566724947 seconds Reactions :0.191494482 seconds Misc :0.049564854 seconds Base State :0.011132525 seconds Time to advance time step: 4.471753834 Call to estdt for level 0 gives dt_lev = 0.201230266 Minimum estdt over all levels = 0.201230266 Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1426182.679 MLMG: Initial residual (resid0) = 1426182.679 MLMG: Final Iter. 9 resid, resid/bnorm = 2.900097987e-05, 2.033468804e-11 MLMG: Timers: Solve = 0.255776444 Iter = 0.253613369 Bottom = 0.19702492 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1426182.679 MLMG: Initial residual (resid0) = 36466.31286 MLMG: Final Iter. 9 resid, resid/bnorm = 2.595243355e-05, 1.819713135e-11 MLMG: Timers: Solve = 0.263349099 Iter = 0.261102541 Bottom = 0.204265162 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6063809.132 MLMG: Initial residual (resid0) = 6063809.132 MLMG: Final Iter. 7 resid, resid/bnorm = 1.506414264e-06, 2.484270582e-13 MLMG: Timers: Solve = 3.523750567 Iter = 3.448373398 Bottom = 0.029276522 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653 Timing summary: Advection :0.249815278 seconds MAC Proj :0.531781435 seconds Nodal Proj :3.634077138 seconds Reactions :0.184397396 seconds Misc :0.029149598 seconds Base State :0.010534634 seconds Time to advance time step: 4.629378374 Call to estdt for level 0 gives dt_lev = 0.2012865787 Minimum estdt over all levels = 0.2012865787 Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1597945.893 MLMG: Initial residual (resid0) = 1597945.893 MLMG: Final Iter. 9 resid, resid/bnorm = 8.293398783e-05, 5.190037297e-11 MLMG: Timers: Solve = 0.248952151 Iter = 0.246668904 Bottom = 0.189518379 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1597945.893 MLMG: Initial residual (resid0) = 76612.76428 MLMG: Final Iter. 9 resid, resid/bnorm = 2.147462435e-05, 1.34388933e-11 MLMG: Timers: Solve = 0.240405273 Iter = 0.238156771 Bottom = 0.181016128 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6670331.571 MLMG: Initial residual (resid0) = 6670331.571 MLMG: Final Iter. 7 resid, resid/bnorm = 1.666136086e-06, 2.497830982e-13 MLMG: Timers: Solve = 3.47067692 Iter = 3.394658355 Bottom = 0.028963422 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118 Timing summary: Advection :0.251257174 seconds MAC Proj :0.502130206 seconds Nodal Proj :3.576277616 seconds Reactions :0.197065348 seconds Misc :0.027614189 seconds Base State :0.010280822 seconds Time to advance time step: 4.55447189 Writing plotfile 3 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.732929622 Total Time: 66.4482116 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::system.regtest_reduction(nvals = 1) :: [1] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 7967 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.03-42-g90854ff447f4) finalized