Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.03-60-g1554699c84a6) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling InitBaseStateGeometry() Calling Init() Calling InitData() ------------------------------------------------------------------------------ reading initial model 640 points found in the initial model file 6 variables found in the initial model file ------------------------------------------------------------------------------ model file mapping, level: 0 dr of MAESTRO base state = 562500.0000 dr of input file data = 562500.0000 maximum radius (cell-centered) of input model = 359718750.0 setting r_cutoff to 365 radius at r_cutoff 205593750.0000000 Maximum HSE Error = 0.6051370840E-04 (after putting initial model into base state arrays, and for density < base_cutoff_density) ------------------------------------------------------------------------------ Writing plotfile reacting_bubble-3d_pltInitData after InitData inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.79217914 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.071303126 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.758457622 Call to firstdt for level 0 gives dt_lev = 0.0004741795139 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139 Minimum firstdt over all levels = 0.0004741795139 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 2054.812696 MLMG: Initial residual (resid0) = 2054.812696 MLMG: Final Iter. 7 resid, resid/bnorm = 3.676809968e-10, 1.789365023e-13 MLMG: Timers: Solve = 3.485805595 Iter = 3.417726423 Bottom = 0.027460862 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1719927642 Minimum estdt over all levels = 0.1719927642 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642 Multiplying dt by init_shrink; dt = 0.1719927642 Ignoring this new dt since it's larger than the previous dt = 0.0004741795139 Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.78950752 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2728631.974 MLMG: Initial residual (resid0) = 2728631.974 MLMG: Final Iter. 9 resid, resid/bnorm = 1.638592221e-05, 6.005178553e-12 MLMG: Timers: Solve = 0.23287848 Iter = 0.225936127 Bottom = 0.170637545 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2728631.974 MLMG: Initial residual (resid0) = 8.815139096 MLMG: Final Iter. 5 resid, resid/bnorm = 4.65502754e-05, 1.705993181e-11 MLMG: Timers: Solve = 0.125417491 Iter = 0.123334247 Bottom = 0.092701251 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.157554389e+10 MLMG: Initial residual (resid0) = 1.157554389e+10 MLMG: Final Iter. 7 resid, resid/bnorm = 0.002922058105, 2.524337631e-13 MLMG: Timers: Solve = 3.53336765 Iter = 3.4510097 Bottom = 0.028764961 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.265338432 seconds MAC Proj :0.379333816 seconds Nodal Proj :3.650588997 seconds Reactions :0.200710623 seconds Misc :0.055385885 seconds Base State :0.008136591 seconds Time to advance time step: 4.551482824 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.74715564 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1308380.192 MLMG: Initial residual (resid0) = 1308380.192 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001239186677, 9.47115131e-11 MLMG: Timers: Solve = 0.234587767 Iter = 0.232371806 Bottom = 0.183581522 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1308380.192 MLMG: Initial residual (resid0) = 6.595798522 MLMG: Final Iter. 5 resid, resid/bnorm = 1.255148495e-05, 9.593148096e-12 MLMG: Timers: Solve = 0.1235316 Iter = 0.121446198 Bottom = 0.090705126 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5488892.554 MLMG: Initial residual (resid0) = 5488892.554 MLMG: Final Iter. 7 resid, resid/bnorm = 1.382024493e-06, 2.517856707e-13 MLMG: Timers: Solve = 3.489076395 Iter = 3.414155804 Bottom = 0.027685937 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.239582575 seconds MAC Proj :0.369780454 seconds Nodal Proj :3.595126599 seconds Reactions :0.193572118 seconds Misc :0.046581653 seconds Base State :0.008959088 seconds Time to advance time step: 4.444781144 Call to estdt for level 0 gives dt_lev = 0.201230266 Minimum estdt over all levels = 0.201230266 Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1426182.679 MLMG: Initial residual (resid0) = 1426182.679 MLMG: Final Iter. 9 resid, resid/bnorm = 1.126019046e-05, 7.895335305e-12 MLMG: Timers: Solve = 0.237449853 Iter = 0.235368972 Bottom = 0.180646657 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1426182.679 MLMG: Initial residual (resid0) = 36466.31285 MLMG: Final Iter. 9 resid, resid/bnorm = 2.046781653e-05, 1.435146901e-11 MLMG: Timers: Solve = 0.226732716 Iter = 0.224649105 Bottom = 0.16992407 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6063809.132 MLMG: Initial residual (resid0) = 6063809.132 MLMG: Final Iter. 7 resid, resid/bnorm = 1.508218702e-06, 2.487246332e-13 MLMG: Timers: Solve = 3.489908052 Iter = 3.415024025 Bottom = 0.028344251 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653 Timing summary: Advection :0.21029534 seconds MAC Proj :0.47595359 seconds Nodal Proj :3.597385243 seconds Reactions :0.185673512 seconds Misc :0.027691908 seconds Base State :0.010049171 seconds Time to advance time step: 4.497138369 Call to estdt for level 0 gives dt_lev = 0.2012865787 Minimum estdt over all levels = 0.2012865787 Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1598057.594 MLMG: Initial residual (resid0) = 1598057.594 MLMG: Final Iter. 9 resid, resid/bnorm = 0.000115923441, 7.25402147e-11 MLMG: Timers: Solve = 0.250272643 Iter = 0.248181928 Bottom = 0.19344372 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1597945.893 MLMG: Initial residual (resid0) = 80405.95529 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001094716977, 6.85077625e-11 MLMG: Timers: Solve = 0.218498879 Iter = 0.21642453 Bottom = 0.167666368 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6670331.571 MLMG: Initial residual (resid0) = 6670331.571 MLMG: Final Iter. 7 resid, resid/bnorm = 1.6677659e-06, 2.500274361e-13 MLMG: Timers: Solve = 3.496045763 Iter = 3.420414503 Bottom = 0.028732288 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118 Timing summary: Advection :0.21269346 seconds MAC Proj :0.480816103 seconds Nodal Proj :3.60254464 seconds Reactions :0.179766988 seconds Misc :0.026891492 seconds Base State :0.009900018 seconds Time to advance time step: 4.502860308 Writing plotfile 3 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.765134818 Total Time: 63.61891534 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 7975 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.03-60-g1554699c84a6) finalized