Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.03-63-g0801a3db7ac4) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling InitBaseStateGeometry() Calling Init() Calling InitData() ------------------------------------------------------------------------------ reading initial model 640 points found in the initial model file 6 variables found in the initial model file ------------------------------------------------------------------------------ model file mapping, level: 0 dr of MAESTRO base state = 562500.0000 dr of input file data = 562500.0000 maximum radius (cell-centered) of input model = 359718750.0 setting r_cutoff to 365 radius at r_cutoff 205593750.0000000 Maximum HSE Error = 0.6051370840E-04 (after putting initial model into base state arrays, and for density < base_cutoff_density) ------------------------------------------------------------------------------ Writing plotfile reacting_bubble-3d_pltInitData after InitData inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.783775371 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.07140627 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.77341609 Call to firstdt for level 0 gives dt_lev = 0.0004741795139 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139 Minimum firstdt over all levels = 0.0004741795139 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 2054.812696 MLMG: Initial residual (resid0) = 2054.812696 MLMG: Final Iter. 7 resid, resid/bnorm = 3.676809968e-10, 1.789365023e-13 MLMG: Timers: Solve = 3.648317709 Iter = 3.580262578 Bottom = 0.027218458 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1719927642 Minimum estdt over all levels = 0.1719927642 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642 Multiplying dt by init_shrink; dt = 0.1719927642 Ignoring this new dt since it's larger than the previous dt = 0.0004741795139 Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.738469665 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2728631.974 MLMG: Initial residual (resid0) = 2728631.974 MLMG: Final Iter. 9 resid, resid/bnorm = 1.638592221e-05, 6.005178553e-12 MLMG: Timers: Solve = 0.241802585 Iter = 0.234822406 Bottom = 0.178112054 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2728631.974 MLMG: Initial residual (resid0) = 8.815139084 MLMG: Final Iter. 5 resid, resid/bnorm = 5.300979733e-05, 1.942724334e-11 MLMG: Timers: Solve = 0.132729245 Iter = 0.13058618 Bottom = 0.099137086 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.157554389e+10 MLMG: Initial residual (resid0) = 1.157554389e+10 MLMG: Final Iter. 7 resid, resid/bnorm = 0.002941012383, 2.540712047e-13 MLMG: Timers: Solve = 3.65601941 Iter = 3.573834807 Bottom = 0.027150923 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.28046245 seconds MAC Proj :0.396508474 seconds Nodal Proj :3.772866946 seconds Reactions :0.218468908 seconds Misc :0.054723217 seconds Base State :0.008615811 seconds Time to advance time step: 4.7231323 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.763081658 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1308380.192 MLMG: Initial residual (resid0) = 1308380.192 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001229112531, 9.39415423e-11 MLMG: Timers: Solve = 0.245340757 Iter = 0.243129188 Bottom = 0.192948954 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1308380.192 MLMG: Initial residual (resid0) = 6.595797774 MLMG: Final Iter. 5 resid, resid/bnorm = 2.368519946e-05, 1.810268881e-11 MLMG: Timers: Solve = 0.128924131 Iter = 0.126785421 Bottom = 0.095449801 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5488892.554 MLMG: Initial residual (resid0) = 5488892.554 MLMG: Final Iter. 7 resid, resid/bnorm = 1.384818461e-06, 2.522946928e-13 MLMG: Timers: Solve = 3.685679803 Iter = 3.607477657 Bottom = 0.028270659 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.257444986 seconds MAC Proj :0.386479848 seconds Nodal Proj :3.79560075 seconds Reactions :0.214615706 seconds Misc :0.04814551 seconds Base State :0.009780235 seconds Time to advance time step: 4.702435976 Call to estdt for level 0 gives dt_lev = 0.201230266 Minimum estdt over all levels = 0.201230266 Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1426182.679 MLMG: Initial residual (resid0) = 1426182.679 MLMG: Final Iter. 9 resid, resid/bnorm = 1.14274153e-05, 8.012588758e-12 MLMG: Timers: Solve = 0.23995801 Iter = 0.23779634 Bottom = 0.181856132 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1426182.679 MLMG: Initial residual (resid0) = 36466.31283 MLMG: Final Iter. 9 resid, resid/bnorm = 2.174340625e-05, 1.524587738e-11 MLMG: Timers: Solve = 0.224742935 Iter = 0.222620038 Bottom = 0.166701428 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6063809.132 MLMG: Initial residual (resid0) = 6063809.132 MLMG: Final Iter. 7 resid, resid/bnorm = 1.511594746e-06, 2.492813862e-13 MLMG: Timers: Solve = 3.384043431 Iter = 3.312060606 Bottom = 0.027636348 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653 Timing summary: Advection :0.225805507 seconds MAC Proj :0.476996143 seconds Nodal Proj :3.493154582 seconds Reactions :0.195995009 seconds Misc :0.029644195 seconds Base State :0.010694945 seconds Time to advance time step: 4.421722331 Call to estdt for level 0 gives dt_lev = 0.2012865787 Minimum estdt over all levels = 0.2012865787 Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1597945.893 MLMG: Initial residual (resid0) = 1597945.893 MLMG: Final Iter. 9 resid, resid/bnorm = 3.470362437e-05, 2.171764671e-11 MLMG: Timers: Solve = 0.223781908 Iter = 0.221628865 Bottom = 0.165702058 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1597945.893 MLMG: Initial residual (resid0) = 58733.40753 MLMG: Final Iter. 9 resid, resid/bnorm = 6.62438975e-05, 4.145565742e-11 MLMG: Timers: Solve = 0.257437574 Iter = 0.255296929 Bottom = 0.199590427 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6670331.571 MLMG: Initial residual (resid0) = 6670331.571 MLMG: Final Iter. 7 resid, resid/bnorm = 1.665146556e-06, 2.496347502e-13 MLMG: Timers: Solve = 3.382871416 Iter = 3.311277639 Bottom = 0.025244339 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118 Timing summary: Advection :0.216592945 seconds MAC Proj :0.493031253 seconds Nodal Proj :3.49169378 seconds Reactions :0.197323469 seconds Misc :0.029014625 seconds Base State :0.009304949 seconds Time to advance time step: 4.427781151 Writing plotfile 3 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.744646349 Total Time: 65.75875311 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 7974 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.03-63-g0801a3db7ac4) finalized