Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.03-68-g0a797e9294ee) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling InitBaseStateGeometry() Calling Init() Calling InitData() ------------------------------------------------------------------------------ reading initial model 640 points found in the initial model file 6 variables found in the initial model file ------------------------------------------------------------------------------ model file mapping, level: 0 dr of MAESTRO base state = 562500.0000 dr of input file data = 562500.0000 maximum radius (cell-centered) of input model = 359718750.0 setting r_cutoff to 365 radius at r_cutoff 205593750.0000000 Maximum HSE Error = 0.6051370840E-04 (after putting initial model into base state arrays, and for density < base_cutoff_density) ------------------------------------------------------------------------------ ------------------------------------------------------------------------------ model file mapping, level: 1 dr of MAESTRO base state = 281250.0000 dr of input file data = 562500.0000 maximum radius (cell-centered) of input model = 359718750.0 setting r_cutoff to 729 radius at r_cutoff 205171875.0000000 Maximum HSE Error = 0.5009359532 (after putting initial model into base state arrays, and for density < base_cutoff_density) ------------------------------------------------------------------------------ Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.210028825 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.013504874 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.207718061 Call to firstdt for level 0 gives dt_lev = 0.0004741795922 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922 Call to firstdt for level 1 gives dt_lev = 0.0002743178815 Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815 Minimum firstdt over all levels = 0.0002743178815 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 9701.829892 MLMG: Initial residual (resid0) = 9701.829892 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0003239303421, 3.338858192e-08 MLMG: Timers: Solve = 0.432489891 Iter = 0.419677302 Bottom = 0.002114846 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1641628699 Call to estdt for level 1 gives dt_lev = 0.1158500464 Minimum estdt over all levels = 0.1158500464 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500464 Multiplying dt by init_shrink; dt = 0.1158500464 Ignoring this new dt since it's larger than the previous dt = 0.0002743178815 Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.200558356 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1769558.576 MLMG: Initial residual (resid0) = 1769558.576 MLMG: Final Iter. 7 resid, resid/bnorm = 0.001462616211, 8.265429756e-10 MLMG: Timers: Solve = 0.111441365 Iter = 0.105292082 Bottom = 0.019438789 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1769558.576 MLMG: Initial residual (resid0) = 0.8873402192 MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002621950509, 1.481697495e-10 MLMG: Timers: Solve = 0.053430039 Iter = 0.048391021 Bottom = 0.00860571 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.293089834e+10 MLMG: Initial residual (resid0) = 1.293089834e+10 MLMG: Final Iter. 9 resid, resid/bnorm = 0.05353546143, 4.140119274e-12 MLMG: Timers: Solve = 0.773628521 Iter = 0.757378922 Bottom = 0.004196071 Done calling nodal solver Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.350354075 seconds MAC Proj :0.194558342 seconds Nodal Proj :0.824241915 seconds Reactions :0.056995735 seconds Misc :0.037099362 seconds Base State :0.012938943 seconds Time to advance time step: 1.463512488 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.198890825 Writing checkpoint 0 after all initialization Writing checkpoint reacting_bubble_2d_chk0000000 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 484084.2315 MLMG: Initial residual (resid0) = 484084.2315 MLMG: Final Iter. 7 resid, resid/bnorm = 3.840820552e-05, 7.934198848e-11 MLMG: Timers: Solve = 0.109171227 Iter = 0.104204835 Bottom = 0.019080993 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 484084.2315 MLMG: Initial residual (resid0) = 0.8687137474 MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002689328369, 5.555496739e-10 MLMG: Timers: Solve = 0.053258374 Iter = 0.048215598 Bottom = 0.00846989 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3547177.966 MLMG: Initial residual (resid0) = 3547177.966 MLMG: Final Iter. 9 resid, resid/bnorm = 1.470930874e-05, 4.146763677e-12 MLMG: Timers: Solve = 0.770848176 Iter = 0.755663775 Bottom = 0.00386888 Done calling nodal solver Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.349892939 seconds MAC Proj :0.191858085 seconds Nodal Proj :0.822980706 seconds Reactions :0.0606178 seconds Misc :0.036688285 seconds Base State :0.014192585 seconds Time to advance time step: 1.462328843 Call to estdt for level 0 gives dt_lev = 0.2285173763 Call to estdt for level 1 gives dt_lev = 0.1613607516 Minimum estdt over all levels = 0.1613607516 Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 709086.9176 MLMG: Initial residual (resid0) = 709086.9176 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005375913192, 7.581458717e-10 MLMG: Timers: Solve = 0.094795941 Iter = 0.089824885 Bottom = 0.016433328 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 709086.9178 MLMG: Initial residual (resid0) = 2.662296435 MLMG: Final Iter. 4 resid, resid/bnorm = 7.439869973e-05, 1.049218338e-10 MLMG: Timers: Solve = 0.068600145 Iter = 0.063641172 Bottom = 0.010820785 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3.168331741e+11 MLMG: Initial residual (resid0) = 3.168331741e+11 MLMG: Final Iter. 10 resid, resid/bnorm = 1.635644913, 5.162479963e-12 MLMG: Timers: Solve = 0.858605405 Iter = 0.843982807 Bottom = 0.00377768 Done calling nodal solver Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696 Timing summary: Advection :0.337703769 seconds MAC Proj :0.191611131 seconds Nodal Proj :0.907422212 seconds Reactions :0.767362681 seconds Misc :0.024134896 seconds Base State :0.014241991 seconds Time to advance time step: 2.228545693 Time to regrid: 0.026983635 Call to estdt for level 0 gives dt_lev = 0.0003214052698 Call to estdt for level 1 gives dt_lev = 0.0003214052698 Minimum estdt over all levels = 0.0003214052698 Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003214052698 Cell Count: Level 0, 245760 cells Level 1, 86016 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 8.705477607e+11 MLMG: Initial residual (resid0) = 8.705477607e+11 MLMG: Final Iter. 8 resid, resid/bnorm = 246.2576514, 2.828766698e-10 MLMG: Timers: Solve = 0.121260254 Iter = 0.116051148 Bottom = 0.017468045 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 4.974080227e+11 MLMG: Initial residual (resid0) = 1.154117509e+12 MLMG: Final Iter. 8 resid, resid/resid0 = 118.5220268, 1.026949387e-10 MLMG: Timers: Solve = 0.124446056 Iter = 0.119432982 Bottom = 0.02103266 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 4.052239457e+11 MLMG: Initial residual (resid0) = 4.052239457e+11 MLMG: Final Iter. 10 resid, resid/bnorm = 1.759910139, 4.343055631e-12 MLMG: Timers: Solve = 0.870950612 Iter = 0.854429749 Bottom = 0.004497366 Done calling nodal solver Timestep 3 ends with TIME = 0.0008974728209 DT = 0.0003214052698 Timing summary: Advection :0.348549383 seconds MAC Proj :0.276093096 seconds Nodal Proj :0.922723595 seconds Reactions :0.961560008 seconds Misc :0.023760251 seconds Base State :0.013446024 seconds Time to advance time step: 2.533001609 Writing plotfile 3 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.300295407 Writing checkpoint 3 Writing checkpoint reacting_bubble_2d_chk0000003 Total Time: 22.3613361 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10025 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.03-68-g0a797e9294ee) finalized