Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.03-159-g1e986786f5b0) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling InitBaseStateGeometry() Calling Init() Calling InitData() initdata model_File = cutoff densities: low density cutoff (for mapping the model) = 1e-10 buoyancy cutoff density (for zeroing rho - rho_0, centrifugal term) = 5e-10 anelastic cutoff = 1e-10 Maximum HSE Error = 4.547473509e-13 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile RT_pltInitData after InitData Time to write plotfile: 0.063489981 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.00464092 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile RT_pltafter_InitProj after InitProj Time to write plotfile: 0.062583367 Call to firstdt for level 0 gives dt_lev = 0.000608983586 Multiplying dt_lev by init_shrink; dt_lev = 6.08983586e-05 Minimum firstdt over all levels = 6.08983586e-05 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.00439233 Iter = 0 Bottom = 0 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.08660444773 Minimum estdt over all levels = 0.08660444773 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.08660444773 Multiplying dt by init_shrink; dt = 0.008660444773 Ignoring this new dt since it's larger than the previous dt = 6.08983586e-05 Writing plotfile RT_pltafter_DivuIter after final DivuIter Time to write plotfile: 0.058748153 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 6.08983586e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 0.002421164472 MLMG: Initial residual (resid0) = 0.002421164472 MLMG: Final Iter. 9 resid, resid/bnorm = 1.751907791e-13, 7.235806619e-11 MLMG: Timers: Solve = 0.071537238 Iter = 0.069441896 Bottom = 0.018916736 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 0.002421164472 MLMG: Initial residual (resid0) = 1.98624303e-06 MLMG: Final Iter. 7 resid, resid/bnorm = 2.697215979e-14, 1.114016008e-11 MLMG: Timers: Solve = 0.057102267 Iter = 0.055262393 Bottom = 0.016525416 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 58.12629965 MLMG: Initial residual (resid0) = 58.12629965 MLMG: Final Iter. 8 resid, resid/bnorm = 6.352252058e-12, 1.092836134e-13 MLMG: Timers: Solve = 0.289277208 Iter = 0.283564348 Bottom = 0.002025099 Done calling nodal solver Timestep 0 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05 Timing summary: Advection :0.081678014 seconds MAC Proj :0.138227635 seconds Nodal Proj :0.307093046 seconds Reactions :0.008078421 seconds Misc :0.008461433 seconds Base State :0.005260492 seconds Time to advance time step: 0.543680253 Writing plotfile 0 after all initialization Time to write plotfile: 0.060984406 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 6.08983586e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2.394223808e-05 MLMG: Initial residual (resid0) = 2.394223808e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 3.185044796e-16, 1.330303702e-11 MLMG: Timers: Solve = 0.072113074 Iter = 0.069589456 Bottom = 0.019367213 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2.394223808e-05 MLMG: Initial residual (resid0) = 1.927242234e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 6.106133462e-16, 2.550360347e-11 MLMG: Timers: Solve = 0.068574374 Iter = 0.066739088 Bottom = 0.016718058 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003539796244 MLMG: Initial residual (resid0) = 0.003539796244 MLMG: Final Iter. 8 resid, resid/bnorm = 4.078768573e-16, 1.152260834e-13 MLMG: Timers: Solve = 0.287537603 Iter = 0.28065881 Bottom = 0.002274005 Done calling nodal solver Timestep 1 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05 Timing summary: Advection :0.082425607 seconds MAC Proj :0.1496246 seconds Nodal Proj :0.307032686 seconds Reactions :0.007706986 seconds Misc :0.009329482 seconds Base State :0.006276555 seconds Time to advance time step: 0.556275008 Call to estdt for level 0 gives dt_lev = 0.312932319 Minimum estdt over all levels = 0.312932319 Timestep 2 starts with TIME = 6.08983586e-05 DT = 6.698819446e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.054534589e-05 MLMG: Initial residual (resid0) = 3.054534589e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 2.755362179e-15, 9.020563028e-11 MLMG: Timers: Solve = 0.077006924 Iter = 0.074393519 Bottom = 0.01873285 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.054534589e-05 MLMG: Initial residual (resid0) = 7.078138181e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 1.540470156e-15, 5.043223807e-11 MLMG: Timers: Solve = 0.068137723 Iter = 0.066316368 Bottom = 0.016103554 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003893977911 MLMG: Initial residual (resid0) = 0.003893977911 MLMG: Final Iter. 8 resid, resid/bnorm = 4.346566509e-16, 1.116227829e-13 MLMG: Timers: Solve = 0.285134464 Iter = 0.280080645 Bottom = 0.002290801 Done calling nodal solver Timestep 2 ends with TIME = 0.0001278865531 DT = 6.698819446e-05 Timing summary: Advection :0.082431061 seconds MAC Proj :0.154164838 seconds Nodal Proj :0.303772269 seconds Reactions :0.007739185 seconds Misc :0.007054018 seconds Base State :0.005773123 seconds Time to advance time step: 0.555298441 Call to estdt for level 0 gives dt_lev = 0.3131176585 Minimum estdt over all levels = 0.3131176585 Timestep 3 starts with TIME = 0.0001278865531 DT = 7.368701391e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.959443128e-05 MLMG: Initial residual (resid0) = 3.959443128e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 3.768662982e-15, 9.518164197e-11 MLMG: Timers: Solve = 0.077345112 Iter = 0.07477393 Bottom = 0.018890317 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.959443128e-05 MLMG: Initial residual (resid0) = 5.520872989e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 1.746780466e-15, 4.411682172e-11 MLMG: Timers: Solve = 0.068667163 Iter = 0.066840737 Bottom = 0.016727292 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004283374996 MLMG: Initial residual (resid0) = 0.004283374996 MLMG: Final Iter. 8 resid, resid/bnorm = 4.961309141e-16, 1.158271024e-13 MLMG: Timers: Solve = 0.286895213 Iter = 0.280316169 Bottom = 0.002275209 Done calling nodal solver Timestep 3 ends with TIME = 0.000201573567 DT = 7.368701391e-05 Timing summary: Advection :0.080076887 seconds MAC Proj :0.154458274 seconds Nodal Proj :0.306538826 seconds Reactions :0.007005152 seconds Misc :0.006870119 seconds Base State :0.00529264 seconds Time to advance time step: 0.555086086 Call to estdt for level 0 gives dt_lev = 0.3131175565 Minimum estdt over all levels = 0.3131175565 Timestep 4 starts with TIME = 0.000201573567 DT = 8.10557153e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 5.589544891e-05 MLMG: Initial residual (resid0) = 5.589544891e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 4.844787822e-15, 8.667589072e-11 MLMG: Timers: Solve = 0.077199523 Iter = 0.074639399 Bottom = 0.018891207 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 5.589544891e-05 MLMG: Initial residual (resid0) = 8.888992178e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 3.957217956e-15, 7.07967828e-11 MLMG: Timers: Solve = 0.068260087 Iter = 0.066443093 Bottom = 0.016295945 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004711712736 MLMG: Initial residual (resid0) = 0.004711712736 MLMG: Final Iter. 8 resid, resid/bnorm = 5.464378949e-16, 1.159743655e-13 MLMG: Timers: Solve = 0.285015123 Iter = 0.279946998 Bottom = 0.002305467 Done calling nodal solver Timestep 4 ends with TIME = 0.0002826292823 DT = 8.10557153e-05 Timing summary: Advection :0.081552355 seconds MAC Proj :0.153943535 seconds Nodal Proj :0.301403762 seconds Reactions :0.007263588 seconds Misc :0.007791182 seconds Base State :0.005741218 seconds Time to advance time step: 0.552088907 Call to estdt for level 0 gives dt_lev = 0.3131175251 Minimum estdt over all levels = 0.3131175251 Timestep 5 starts with TIME = 0.0002826292823 DT = 8.916128683e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 7.382659551e-05 MLMG: Initial residual (resid0) = 7.382659551e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 6.026567634e-15, 8.163139031e-11 MLMG: Timers: Solve = 0.077196605 Iter = 0.07465656 Bottom = 0.018828201 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 7.382659552e-05 MLMG: Initial residual (resid0) = 4.871456785e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 2.00307029e-15, 2.713209618e-11 MLMG: Timers: Solve = 0.07018654 Iter = 0.06835936 Bottom = 0.018237083 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.005182884419 MLMG: Initial residual (resid0) = 0.005182884419 MLMG: Final Iter. 8 resid, resid/bnorm = 5.852523327e-16, 1.129201976e-13 MLMG: Timers: Solve = 0.285091354 Iter = 0.279503448 Bottom = 0.002053417 Done calling nodal solver Timestep 5 ends with TIME = 0.0003717905691 DT = 8.916128683e-05 Timing summary: Advection :0.083639724 seconds MAC Proj :0.155841194 seconds Nodal Proj :0.306195134 seconds Reactions :0.006895335 seconds Misc :0.006696168 seconds Base State :0.005608958 seconds Time to advance time step: 0.559408915 Writing plotfile 5 Time to write plotfile: 0.064435558 Total Time: 3.905750863 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [RT_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10390 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.03-159-g1e986786f5b0) finalized