Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.03-169-g9b6ba25d90ce) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling InitBaseStateGeometry() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 1 dr of MAESTRO base state = 281250.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 729 radius at r_cutoff 205171875 Maximum HSE Error = 0.500936 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.205621919 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.013664879 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.196383459 Call to firstdt for level 0 gives dt_lev = 0.0004741795922 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922 Call to firstdt for level 1 gives dt_lev = 0.0002743178815 Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815 Minimum firstdt over all levels = 0.0002743178815 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 9701.832847 MLMG: Initial residual (resid0) = 9701.832847 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0003239321038, 3.338875333e-08 MLMG: Timers: Solve = 0.430888496 Iter = 0.418134916 Bottom = 0.002039482 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1641628699 Call to estdt for level 1 gives dt_lev = 0.1158500464 Minimum estdt over all levels = 0.1158500464 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500464 Multiplying dt by init_shrink; dt = 0.1158500464 Ignoring this new dt since it's larger than the previous dt = 0.0002743178815 Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.19385891 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1769558.577 MLMG: Initial residual (resid0) = 1769558.577 MLMG: Final Iter. 7 resid, resid/bnorm = 0.001462266826, 8.263455335e-10 MLMG: Timers: Solve = 0.115182033 Iter = 0.109034602 Bottom = 0.019663731 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1769558.577 MLMG: Initial residual (resid0) = 0.8873402191 MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002626023848, 1.483999389e-10 MLMG: Timers: Solve = 0.054265853 Iter = 0.049354933 Bottom = 0.00921843 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.293089834e+10 MLMG: Initial residual (resid0) = 1.293089834e+10 MLMG: Final Iter. 9 resid, resid/bnorm = 0.05353927612, 4.140414279e-12 MLMG: Timers: Solve = 0.771485173 Iter = 0.754171114 Bottom = 0.003449412 Done calling nodal solver Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.343751329 seconds MAC Proj :0.200065849 seconds Nodal Proj :0.823208202 seconds Reactions :0.059681648 seconds Misc :0.034914999 seconds Base State :0.012058752 seconds Time to advance time step: 1.461892545 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.198789437 Writing checkpoint 0 after all initialization Writing checkpoint reacting_bubble_2d_chk0000000 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 484084.2313 MLMG: Initial residual (resid0) = 484084.2313 MLMG: Final Iter. 7 resid, resid/bnorm = 3.840817402e-05, 7.934192344e-11 MLMG: Timers: Solve = 0.109197032 Iter = 0.10422475 Bottom = 0.018907098 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 484084.2313 MLMG: Initial residual (resid0) = 0.8687136997 MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002689527393, 5.555907875e-10 MLMG: Timers: Solve = 0.05287884 Iter = 0.047986954 Bottom = 0.008298409 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3547177.967 MLMG: Initial residual (resid0) = 3547177.967 MLMG: Final Iter. 9 resid, resid/bnorm = 1.466274261e-05, 4.13363602e-12 MLMG: Timers: Solve = 0.768455147 Iter = 0.753254652 Bottom = 0.004040405 Done calling nodal solver Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.353222369 seconds MAC Proj :0.190858189 seconds Nodal Proj :0.821013984 seconds Reactions :0.063281166 seconds Misc :0.037845482 seconds Base State :0.013894377 seconds Time to advance time step: 1.466515963 Call to estdt for level 0 gives dt_lev = 0.2285173763 Call to estdt for level 1 gives dt_lev = 0.1613607516 Minimum estdt over all levels = 0.1613607516 Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 709086.9178 MLMG: Initial residual (resid0) = 709086.9178 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005382483481, 7.590724559e-10 MLMG: Timers: Solve = 0.095641701 Iter = 0.090679375 Bottom = 0.016942424 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 709086.918 MLMG: Initial residual (resid0) = 2.662292699 MLMG: Final Iter. 4 resid, resid/bnorm = 7.430832206e-05, 1.047943774e-10 MLMG: Timers: Solve = 0.068738624 Iter = 0.063840146 Bottom = 0.010949566 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3.168331762e+11 MLMG: Initial residual (resid0) = 3.168331762e+11 MLMG: Final Iter. 10 resid, resid/bnorm = 1.636752129, 5.165974561e-12 MLMG: Timers: Solve = 0.85723808 Iter = 0.841290942 Bottom = 0.004120297 Done calling nodal solver Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696 Timing summary: Advection :0.326739393 seconds MAC Proj :0.193180819 seconds Nodal Proj :0.90686928 seconds Reactions :0.683183532 seconds Misc :0.026223813 seconds Base State :0.012753444 seconds Time to advance time step: 2.136513095 Time to regrid: 0.02794692 Call to estdt for level 0 gives dt_lev = 0.0003214052696 Call to estdt for level 1 gives dt_lev = 0.0003214052696 Minimum estdt over all levels = 0.0003214052696 Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003214052696 Cell Count: Level 0, 245760 cells Level 1, 86016 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 8.705477659e+11 MLMG: Initial residual (resid0) = 8.705477659e+11 MLMG: Final Iter. 8 resid, resid/bnorm = 246.2576597, 2.828766776e-10 MLMG: Timers: Solve = 0.121172444 Iter = 0.115967186 Bottom = 0.017390669 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 4.974080264e+11 MLMG: Initial residual (resid0) = 1.15415393e+12 MLMG: Final Iter. 8 resid, resid/resid0 = 118.4364155, 1.026175213e-10 MLMG: Timers: Solve = 0.125197486 Iter = 0.120320925 Bottom = 0.021287172 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 4.052343929e+11 MLMG: Initial residual (resid0) = 4.052343929e+11 MLMG: Final Iter. 10 resid, resid/bnorm = 1.626444828, 4.013590298e-12 MLMG: Timers: Solve = 0.864592599 Iter = 0.847402106 Bottom = 0.004187874 Done calling nodal solver Timestep 3 ends with TIME = 0.0008974728207 DT = 0.0003214052696 Timing summary: Advection :0.349572308 seconds MAC Proj :0.276386487 seconds Nodal Proj :0.917626898 seconds Reactions :0.838536568 seconds Misc :0.025194018 seconds Base State :0.016442639 seconds Time to advance time step: 2.407677075 Writing plotfile 3 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.300286492 Writing checkpoint 3 Writing checkpoint reacting_bubble_2d_chk0000003 Total Time: 22.06717779 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10028 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.03-169-g9b6ba25d90ce) finalized