Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.03-170-gb98a236c3261) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling InitBaseStateGeometry() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-3d_pltInitData after InitData inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.711474514 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.066679357 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.673743239 Call to firstdt for level 0 gives dt_lev = 0.0004741795139 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139 Minimum firstdt over all levels = 0.0004741795139 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 2054.812665 MLMG: Initial residual (resid0) = 2054.812665 MLMG: Final Iter. 7 resid, resid/bnorm = 3.687610217e-10, 1.794621125e-13 MLMG: Timers: Solve = 3.385131036 Iter = 3.320516251 Bottom = 0.026780203 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1719927642 Minimum estdt over all levels = 0.1719927642 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642 Multiplying dt by init_shrink; dt = 0.1719927642 Ignoring this new dt since it's larger than the previous dt = 0.0004741795139 Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.706741462 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2728631.974 MLMG: Initial residual (resid0) = 2728631.974 MLMG: Final Iter. 9 resid, resid/bnorm = 1.448590774e-05, 5.308853622e-12 MLMG: Timers: Solve = 0.257410338 Iter = 0.252899295 Bottom = 0.196405955 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2728631.974 MLMG: Initial residual (resid0) = 8.815136378 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0001147196839, 4.20429303e-11 MLMG: Timers: Solve = 0.123818943 Iter = 0.121699845 Bottom = 0.090139437 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.15755439e+10 MLMG: Initial residual (resid0) = 1.15755439e+10 MLMG: Final Iter. 7 resid, resid/bnorm = 0.002906441689, 2.51084676e-13 MLMG: Timers: Solve = 3.404686918 Iter = 3.322564897 Bottom = 0.027229966 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.267924645 seconds MAC Proj :0.400675425 seconds Nodal Proj :3.521812354 seconds Reactions :0.209802131 seconds Misc :0.057037217 seconds Base State :0.008002441 seconds Time to advance time step: 4.457350373 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.698794484 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1308380.192 MLMG: Initial residual (resid0) = 1308380.192 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001239507692, 9.47360484e-11 MLMG: Timers: Solve = 0.236971099 Iter = 0.234921537 Bottom = 0.185146353 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1308380.192 MLMG: Initial residual (resid0) = 6.59581039 MLMG: Final Iter. 5 resid, resid/bnorm = 5.016157287e-05, 3.833868257e-11 MLMG: Timers: Solve = 0.119746279 Iter = 0.117642199 Bottom = 0.086420717 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5488892.555 MLMG: Initial residual (resid0) = 5488892.555 MLMG: Final Iter. 7 resid, resid/bnorm = 1.393898856e-06, 2.539490147e-13 MLMG: Timers: Solve = 3.394746846 Iter = 3.321284594 Bottom = 0.026336868 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.254185406 seconds MAC Proj :0.368545382 seconds Nodal Proj :3.503272953 seconds Reactions :0.194762611 seconds Misc :0.051159087 seconds Base State :0.009756668 seconds Time to advance time step: 4.372051163 Call to estdt for level 0 gives dt_lev = 0.201230266 Minimum estdt over all levels = 0.201230266 Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1426182.68 MLMG: Initial residual (resid0) = 1426182.68 MLMG: Final Iter. 9 resid, resid/bnorm = 4.477503384e-05, 3.139502005e-11 MLMG: Timers: Solve = 0.249472053 Iter = 0.24734086 Bottom = 0.191477243 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1426182.68 MLMG: Initial residual (resid0) = 36466.31282 MLMG: Final Iter. 9 resid, resid/bnorm = 1.416672132e-05, 9.933314658e-12 MLMG: Timers: Solve = 0.246831419 Iter = 0.244810389 Bottom = 0.188939945 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6063809.133 MLMG: Initial residual (resid0) = 6063809.133 MLMG: Final Iter. 7 resid, resid/bnorm = 1.513690222e-06, 2.49626957e-13 MLMG: Timers: Solve = 3.447822658 Iter = 3.374487083 Bottom = 0.02845035 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653 Timing summary: Advection :0.218727102 seconds MAC Proj :0.508390788 seconds Nodal Proj :3.559009655 seconds Reactions :0.18938071 seconds Misc :0.027572495 seconds Base State :0.008861025 seconds Time to advance time step: 4.503241309 Call to estdt for level 0 gives dt_lev = 0.2012865787 Minimum estdt over all levels = 0.2012865787 Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1597945.894 MLMG: Initial residual (resid0) = 1597945.894 MLMG: Final Iter. 9 resid, resid/bnorm = 6.444748643e-05, 4.03314572e-11 MLMG: Timers: Solve = 0.260166344 Iter = 0.258133827 Bottom = 0.202049623 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1597945.894 MLMG: Initial residual (resid0) = 398520.6126 MLMG: Final Iter. 9 resid, resid/bnorm = 4.104421279e-05, 2.56856086e-11 MLMG: Timers: Solve = 0.261944669 Iter = 0.259838594 Bottom = 0.203616887 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6670331.568 MLMG: Initial residual (resid0) = 6670331.568 MLMG: Final Iter. 7 resid, resid/bnorm = 1.678126864e-06, 2.515807269e-13 MLMG: Timers: Solve = 3.445660075 Iter = 3.37156688 Bottom = 0.026568583 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118 Timing summary: Advection :0.221634982 seconds MAC Proj :0.534530936 seconds Nodal Proj :3.556106063 seconds Reactions :0.200251058 seconds Misc :0.027170639 seconds Base State :0.009103867 seconds Time to advance time step: 4.539838167 Writing plotfile 3 inner sponge: r_sp , r_tp : 0.186468750000E+09 0.224718750000E+09 Time to write plotfile: 0.653038419 Total Time: 64.72176126 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 7977 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.03-170-gb98a236c3261) finalized