Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.04-3-gb35aa25c7ad2) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling InitBaseStateGeometry() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 1 dr of MAESTRO base state = 281250.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 729 radius at r_cutoff 205171875 Maximum HSE Error = 0.500936 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.187806337 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.01328534 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.186198532 Call to firstdt for level 0 gives dt_lev = 0.0004741795922 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922 Call to firstdt for level 1 gives dt_lev = 0.0002743178815 Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815 Minimum firstdt over all levels = 0.0002743178815 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 9701.829259 MLMG: Initial residual (resid0) = 9701.829259 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0003239320911, 3.338876437e-08 MLMG: Timers: Solve = 0.427665078 Iter = 0.4153425 Bottom = 0.002042115 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1641628699 Call to estdt for level 1 gives dt_lev = 0.1158500464 Minimum estdt over all levels = 0.1158500464 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500464 Multiplying dt by init_shrink; dt = 0.1158500464 Ignoring this new dt since it's larger than the previous dt = 0.0002743178815 Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.180702787 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1769558.577 MLMG: Initial residual (resid0) = 1769558.577 MLMG: Final Iter. 7 resid, resid/bnorm = 0.001462569594, 8.265166312e-10 MLMG: Timers: Solve = 0.115278777 Iter = 0.108630244 Bottom = 0.019272651 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1769558.577 MLMG: Initial residual (resid0) = 0.8873402202 MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002626024804, 1.48399993e-10 MLMG: Timers: Solve = 0.053655779 Iter = 0.048643939 Bottom = 0.00905523 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.293089834e+10 MLMG: Initial residual (resid0) = 1.293089834e+10 MLMG: Final Iter. 9 resid, resid/bnorm = 0.05367279053, 4.150739501e-12 MLMG: Timers: Solve = 0.773350365 Iter = 0.756981128 Bottom = 0.003558054 Done calling nodal solver Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.327416547 seconds MAC Proj :0.199711462 seconds Nodal Proj :0.820559046 seconds Reactions :0.058121521 seconds Misc :0.033465593 seconds Base State :0.014943614 seconds Time to advance time step: 1.439524708 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.176815904 Writing checkpoint 0 after all initialization Writing checkpoint reacting_bubble_2d_chk0000000 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 484084.2313 MLMG: Initial residual (resid0) = 484084.2313 MLMG: Final Iter. 7 resid, resid/bnorm = 3.840804659e-05, 7.93416602e-11 MLMG: Timers: Solve = 0.10899706 Iter = 0.103964573 Bottom = 0.018963298 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 484084.2313 MLMG: Initial residual (resid0) = 0.8687136576 MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002689486279, 5.555822943e-10 MLMG: Timers: Solve = 0.052687659 Iter = 0.047702438 Bottom = 0.008245125 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3547177.967 MLMG: Initial residual (resid0) = 3547177.967 MLMG: Final Iter. 9 resid, resid/bnorm = 1.469813287e-05, 4.143613038e-12 MLMG: Timers: Solve = 0.762259368 Iter = 0.74720979 Bottom = 0.003932832 Done calling nodal solver Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.334666114 seconds MAC Proj :0.189783102 seconds Nodal Proj :0.809739535 seconds Reactions :0.063890286 seconds Misc :0.030972304 seconds Base State :0.011386861 seconds Time to advance time step: 1.42931442 Call to estdt for level 0 gives dt_lev = 0.2285173762 Call to estdt for level 1 gives dt_lev = 0.1613607515 Minimum estdt over all levels = 0.1613607515 Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 709086.9142 MLMG: Initial residual (resid0) = 709086.9142 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005371079828, 7.574642432e-10 MLMG: Timers: Solve = 0.095179207 Iter = 0.090180013 Bottom = 0.016812302 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 709086.9144 MLMG: Initial residual (resid0) = 2.665643911 MLMG: Final Iter. 4 resid, resid/bnorm = 7.437075837e-05, 1.048824296e-10 MLMG: Timers: Solve = 0.068424476 Iter = 0.063285598 Bottom = 0.010777511 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3903898.779 MLMG: Initial residual (resid0) = 3903898.779 MLMG: Final Iter. 9 resid, resid/bnorm = 1.621618867e-05, 4.153844551e-12 MLMG: Timers: Solve = 0.761514117 Iter = 0.746730197 Bottom = 0.00395569 Done calling nodal solver Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696 Timing summary: Advection :0.318861258 seconds MAC Proj :0.192166069 seconds Nodal Proj :0.80767554 seconds Reactions :0.057980202 seconds Misc :0.016795018 seconds Base State :0.011636295 seconds Time to advance time step: 1.393733294 Time to regrid: 0.01820338 Call to estdt for level 0 gives dt_lev = 0.2285301617 Call to estdt for level 1 gives dt_lev = 0.1613816124 Minimum estdt over all levels = 0.1613816124 Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003319246366 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1070292.597 MLMG: Initial residual (resid0) = 1070292.597 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005815319782, 5.433392512e-10 MLMG: Timers: Solve = 0.094906052 Iter = 0.089852101 Bottom = 0.016722855 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1070292.597 MLMG: Initial residual (resid0) = 4.638863343 MLMG: Final Iter. 4 resid, resid/bnorm = 0.0001293686433, 1.20872221e-10 MLMG: Timers: Solve = 0.068648835 Iter = 0.063641779 Bottom = 0.010911094 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 4294287.82 MLMG: Initial residual (resid0) = 4294287.82 MLMG: Final Iter. 9 resid, resid/bnorm = 1.777149737e-05, 4.138403878e-12 MLMG: Timers: Solve = 0.763297256 Iter = 0.748447363 Bottom = 0.003457718 Done calling nodal solver Timestep 3 ends with TIME = 0.0009079921877 DT = 0.0003319246366 Timing summary: Advection :0.318944434 seconds MAC Proj :0.192165239 seconds Nodal Proj :0.810310301 seconds Reactions :0.056990721 seconds Misc :0.017336017 seconds Base State :0.01181309 seconds Time to advance time step: 1.396052607 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.214113353 Writing checkpoint 3 Writing checkpoint reacting_bubble_2d_chk0000003 Total Time: 20.13393704 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10031 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.04-3-gb35aa25c7ad2) finalized