Initializing CUDA...
CUDA initialized with 1 GPU
AMReX (20.04-3-gb35aa25c7ad2) initialized
Calling Setup()
Calling ReadParameters()
WARNING: burning_cutoff_density_lo not supplied in the inputs file
WARNING: setting burning_cutoff_density_lo = base_cutoff_density
reading extern runtime parameters ...
ERROR: problem in the namelist
Calling VariableSetup()
Initializing Helmholtz EOS and using Coulomb corrections.
Calling set_method_params()
Calling BCSetup()
Calling init_base_state_geometry()
Calling InitBaseStateGeometry()
Calling Init()
Calling InitData()
initdata model_File = model.hse.cool.coulomb
model file = model.hse.cool.coulomb
reading initial model
640 points found in the initial model
6 variables found in the initial model
model file mapping, level: 0
dr of MAESTRO base state = 562500.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 365
radius at r_cutoff 205593750
Maximum HSE Error = 0.000061
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
Writing plotfile reacting_bubble-3d_pltInitData after InitData
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.685959177
inner sponge: r_sp , r_tp : 186468750, 224718750
Doing initial projection
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.072276334 Iter = 0 Bottom = 0
Done calling nodal solver
Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.732254771
Call to firstdt for level 0 gives dt_lev = 0.0004741795139
Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139
Minimum firstdt over all levels = 0.0004741795139
Doing initial divu iteration #1
Calling nodal solver
MLMG: Initial rhs = 2054.812665
MLMG: Initial residual (resid0) = 2054.812665
MLMG: Final Iter. 7 resid, resid/bnorm = 3.677484983e-10, 1.789693555e-13
MLMG: Timers: Solve = 3.49943955 Iter = 3.427292314 Bottom = 0.027399434
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.1719927642
Minimum estdt over all levels = 0.1719927642
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642
Multiplying dt by init_shrink; dt = 0.1719927642
Ignoring this new dt since it's larger than the previous dt = 0.0004741795139
Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.644691312
Doing initial pressure iteration #1
Timestep 0 starts with TIME = 0 DT = 0.0004741795139
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 2728631.974
MLMG: Initial residual (resid0) = 2728631.974
MLMG: Final Iter. 9 resid, resid/bnorm = 1.629325561e-05, 5.971217726e-12
MLMG: Timers: Solve = 0.245972467 Iter = 0.240619156 Bottom = 0.183829281
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 2728631.974
MLMG: Initial residual (resid0) = 8.815142127
MLMG: Final Iter. 5 resid, resid/bnorm = 5.212546507e-05, 1.91031497e-11
MLMG: Timers: Solve = 0.1302566 Iter = 0.128109747 Bottom = 0.096813033
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 1.15755439e+10
MLMG: Initial residual (resid0) = 1.15755439e+10
MLMG: Final Iter. 7 resid, resid/bnorm = 0.002930283546, 2.531443509e-13
MLMG: Timers: Solve = 3.527033778 Iter = 3.441176754 Bottom = 0.027935217
Done calling nodal solver
Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139
Timing summary:
Advection :0.236058206 seconds
MAC Proj :0.396530246 seconds
Nodal Proj :3.633751091 seconds
Reactions :0.21730507 seconds
Misc :0.048158279 seconds
Base State :0.007519232 seconds
Time to advance time step: 4.531944694
Writing plotfile 0 after all initialization
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.64349512
Calling Evolve()
Timestep 1 starts with TIME = 0 DT = 0.0004741795139
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1308380.192
MLMG: Initial residual (resid0) = 1308380.192
MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001240257843, 9.479338274e-11
MLMG: Timers: Solve = 0.240345322 Iter = 0.238133844 Bottom = 0.187969748
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1308380.192
MLMG: Initial residual (resid0) = 10.01387261
MLMG: Final Iter. 5 resid, resid/bnorm = 8.881316644e-05, 6.788024382e-11
MLMG: Timers: Solve = 0.138902463 Iter = 0.136846243 Bottom = 0.105314391
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 5488892.555
MLMG: Initial residual (resid0) = 5488892.555
MLMG: Final Iter. 7 resid, resid/bnorm = 1.367006917e-06, 2.490496768e-13
MLMG: Timers: Solve = 3.509229682 Iter = 3.427969722 Bottom = 0.029201369
Done calling nodal solver
Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139
Timing summary:
Advection :0.209662503 seconds
MAC Proj :0.391828702 seconds
Nodal Proj :3.609695143 seconds
Reactions :0.217228532 seconds
Misc :0.03820662 seconds
Base State :0.007445827 seconds
Time to advance time step: 4.46677768
Call to estdt for level 0 gives dt_lev = 0.201230266
Minimum estdt over all levels = 0.201230266
Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1426182.68
MLMG: Initial residual (resid0) = 1426182.68
MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001376373621, 9.650752598e-11
MLMG: Timers: Solve = 0.213607612 Iter = 0.211445781 Bottom = 0.161620185
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1426182.68
MLMG: Initial residual (resid0) = 469315.5987
MLMG: Final Iter. 9 resid, resid/bnorm = 0.0001190676719, 8.348697085e-11
MLMG: Timers: Solve = 0.251914376 Iter = 0.249847232 Bottom = 0.193183947
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 6063809.132
MLMG: Initial residual (resid0) = 6063809.132
MLMG: Final Iter. 7 resid, resid/bnorm = 1.510663424e-06, 2.491277992e-13
MLMG: Timers: Solve = 3.602669003 Iter = 3.52370789 Bottom = 0.032040123
Done calling nodal solver
Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653
Timing summary:
Advection :0.1868781 seconds
MAC Proj :0.477437962 seconds
Nodal Proj :3.707921377 seconds
Reactions :0.187226951 seconds
Misc :0.018158344 seconds
Base State :0.008444421 seconds
Time to advance time step: 4.577774059
Call to estdt for level 0 gives dt_lev = 0.2012865787
Minimum estdt over all levels = 0.2012865787
Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1597945.894
MLMG: Initial residual (resid0) = 1597945.894
MLMG: Final Iter. 10 resid, resid/bnorm = 2.096745681e-05, 1.312150611e-11
MLMG: Timers: Solve = 0.257326631 Iter = 0.255100799 Bottom = 0.192688036
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1597945.894
MLMG: Initial residual (resid0) = 76609.2409
MLMG: Final Iter. 9 resid, resid/bnorm = 2.221268704e-05, 1.390077545e-11
MLMG: Timers: Solve = 0.252368513 Iter = 0.25029757 Bottom = 0.193420037
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 6670331.571
MLMG: Initial residual (resid0) = 6670331.571
MLMG: Final Iter. 7 resid, resid/bnorm = 1.669919584e-06, 2.503503111e-13
MLMG: Timers: Solve = 3.563897765 Iter = 3.483735821 Bottom = 0.027984224
Done calling nodal solver
Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118
Timing summary:
Advection :0.183044273 seconds
MAC Proj :0.522050594 seconds
Nodal Proj :3.668684798 seconds
Reactions :0.205016834 seconds
Misc :0.017002938 seconds
Base State :0.009835387 seconds
Time to advance time step: 4.595929759
Writing plotfile 3
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.635885958
Total Time: 65.39126623
Unused ParmParse Variables:
[TOP]::maestro.v(nvals = 1) :: [1]
[TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2]
[TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk]
[TOP]::amr.checkpoint_files_output(nvals = 1) :: [0]
Total GPU global memory (MB): 12066
Free GPU global memory (MB): 7978
[The Arena] space allocated (MB): 9049
[The Arena] space used (MB): 0
[The Device Arena] space allocated (MB): 8
[The Device Arena] space used (MB): 0
[The Managed Arena] space allocated (MB): 8
[The Managed Arena] space used (MB): 0
[The Pinned Arena] space allocated (MB): 8
[The Pinned Arena] space used (MB): 0
AMReX (20.04-3-gb35aa25c7ad2) finalized