Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.04-156-g48a6cecd9b51) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling InitBaseStateGeometry() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-3d_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.657915128 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.070773653 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.63549696 Call to firstdt for level 0 gives dt_lev = 0.0004741795139 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139 Minimum firstdt over all levels = 0.0004741795139 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 2054.812665 MLMG: Initial residual (resid0) = 2054.812665 MLMG: Final Iter. 7 resid, resid/bnorm = 3.679581084e-10, 1.790713648e-13 MLMG: Timers: Solve = 3.450479255 Iter = 3.381615447 Bottom = 0.02832738 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1719927642 Minimum estdt over all levels = 0.1719927642 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642 Multiplying dt by init_shrink; dt = 0.1719927642 Ignoring this new dt since it's larger than the previous dt = 0.0004741795139 Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.602929494 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2728631.974 MLMG: Initial residual (resid0) = 2728631.974 MLMG: Final Iter. 9 resid, resid/bnorm = 1.572049223e-05, 5.761309103e-12 MLMG: Timers: Solve = 0.264707639 Iter = 0.260232487 Bottom = 0.202893842 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2728627.802 MLMG: Initial residual (resid0) = 8728.675104 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0002104382729, 7.712238098e-11 MLMG: Timers: Solve = 0.153060524 Iter = 0.150959731 Bottom = 0.119372592 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.15755262e+10 MLMG: Initial residual (resid0) = 1.15755262e+10 MLMG: Final Iter. 7 resid, resid/bnorm = 0.002904415131, 2.509099872e-13 MLMG: Timers: Solve = 3.464367268 Iter = 3.380168482 Bottom = 0.030295747 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.218639832 seconds MAC Proj :0.435857916 seconds Nodal Proj :3.570278535 seconds Reactions :0.20455631 seconds Misc :0.045823907 seconds Base State :0.008956457 seconds Time to advance time step: 4.475312265 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.647205872 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1308378.371 MLMG: Initial residual (resid0) = 1308378.371 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001257435651, 9.610642301e-11 MLMG: Timers: Solve = 0.242665782 Iter = 0.240445716 Bottom = 0.190037245 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1308380.242 MLMG: Initial residual (resid0) = 8728.549304 MLMG: Final Iter. 6 resid, resid/bnorm = 1.3765689e-05, 1.052116852e-11 MLMG: Timers: Solve = 0.177527721 Iter = 0.175445967 Bottom = 0.137622686 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5488883.992 MLMG: Initial residual (resid0) = 5488883.992 MLMG: Final Iter. 7 resid, resid/bnorm = 1.464097295e-06, 2.667386116e-13 MLMG: Timers: Solve = 3.455946572 Iter = 3.379496346 Bottom = 0.028975568 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.202927512 seconds MAC Proj :0.432061684 seconds Nodal Proj :3.556618852 seconds Reactions :0.201384799 seconds Misc :0.03489137 seconds Base State :0.008012711 seconds Time to advance time step: 4.428044695 Call to estdt for level 0 gives dt_lev = 0.2012294723 Minimum estdt over all levels = 0.2012294723 Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1426180.188 MLMG: Initial residual (resid0) = 1426180.188 MLMG: Final Iter. 9 resid, resid/bnorm = 6.435455138e-05, 4.512371714e-11 MLMG: Timers: Solve = 0.265617917 Iter = 0.263437832 Bottom = 0.206831838 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1426291.684 MLMG: Initial residual (resid0) = 36461.39716 MLMG: Final Iter. 9 resid, resid/bnorm = 2.05861717e-05, 1.443335324e-11 MLMG: Timers: Solve = 0.241634244 Iter = 0.239543501 Bottom = 0.18307244 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6063485.847 MLMG: Initial residual (resid0) = 6063485.847 MLMG: Final Iter. 8 resid, resid/bnorm = 2.348528752e-05, 3.873232017e-12 MLMG: Timers: Solve = 3.93904591 Iter = 3.862655454 Bottom = 0.035490988 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653 Timing summary: Advection :0.171627749 seconds MAC Proj :0.51923997 seconds Nodal Proj :4.035600842 seconds Reactions :0.19474173 seconds Misc :0.016136939 seconds Base State :0.007611723 seconds Time to advance time step: 4.937510379 Call to estdt for level 0 gives dt_lev = 0.2012666333 Minimum estdt over all levels = 0.2012666333 Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1597713.458 MLMG: Initial residual (resid0) = 1597713.458 MLMG: Final Iter. 9 resid, resid/bnorm = 4.749805282e-05, 2.972876806e-11 MLMG: Timers: Solve = 0.249890034 Iter = 0.247694689 Bottom = 0.191156062 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1597946.235 MLMG: Initial residual (resid0) = 39074.849 MLMG: Final Iter. 9 resid, resid/bnorm = 2.062556409e-05, 1.290754572e-11 MLMG: Timers: Solve = 0.248237238 Iter = 0.246151322 Bottom = 0.18971967 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6669975.866 MLMG: Initial residual (resid0) = 6669975.866 MLMG: Final Iter. 7 resid, resid/bnorm = 3.028178207e-05, 4.540013739e-12 MLMG: Timers: Solve = 3.458481375 Iter = 3.382134323 Bottom = 0.031706028 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118 Timing summary: Advection :0.170520114 seconds MAC Proj :0.510046018 seconds Nodal Proj :3.556454205 seconds Reactions :0.193819266 seconds Misc :0.01639453 seconds Base State :0.007405738 seconds Time to advance time step: 4.447382115 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.610930157 Total Time: 28.66392484 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 7979 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.04-156-g48a6cecd9b51) finalized