Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.04-204-g82bd805ef145) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling InitBaseStateGeometry() Calling Init() Calling InitData() initdata model_File = cutoff densities: low density cutoff (for mapping the model) = 1e-10 buoyancy cutoff density (for zeroing rho - rho_0, centrifugal term) = 5e-10 anelastic cutoff = 1e-10 Maximum HSE Error = 4.547473509e-13 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile RT_pltInitData after InitData Time to write plotfile: 0.061919293 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.004552655 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile RT_pltafter_InitProj after InitProj Time to write plotfile: 0.077092002 Call to firstdt for level 0 gives dt_lev = 0.000608983586 Multiplying dt_lev by init_shrink; dt_lev = 6.08983586e-05 Minimum firstdt over all levels = 6.08983586e-05 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.004297487 Iter = 0 Bottom = 0 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.08660444773 Minimum estdt over all levels = 0.08660444773 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.08660444773 Multiplying dt by init_shrink; dt = 0.008660444773 Ignoring this new dt since it's larger than the previous dt = 6.08983586e-05 Writing plotfile RT_pltafter_DivuIter after final DivuIter Time to write plotfile: 0.073797356 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 6.08983586e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 0.002421164472 MLMG: Initial residual (resid0) = 0.002421164472 MLMG: Final Iter. 9 resid, resid/bnorm = 1.751907834e-13, 7.235806797e-11 MLMG: Timers: Solve = 0.073757468 Iter = 0.071624491 Bottom = 0.019493534 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 0.002421205691 MLMG: Initial residual (resid0) = 2.151449932e-06 MLMG: Final Iter. 7 resid, resid/bnorm = 9.927908625e-14, 4.100398682e-11 MLMG: Timers: Solve = 0.056570952 Iter = 0.054706765 Bottom = 0.014166121 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 58.12657035 MLMG: Initial residual (resid0) = 58.12657035 MLMG: Final Iter. 8 resid, resid/bnorm = 6.700417998e-12, 1.152728943e-13 MLMG: Timers: Solve = 0.287480875 Iter = 0.281877774 Bottom = 0.001940396 Done calling nodal solver Timestep 0 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05 Timing summary: Advection :0.083716072 seconds MAC Proj :0.139715879 seconds Nodal Proj :0.3034027 seconds Reactions :0.008983012 seconds Misc :0.008244937 seconds Base State :0.006723629 seconds Time to advance time step: 0.544172667 Writing plotfile 0 after all initialization Time to write plotfile: 0.064620506 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 6.08983586e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2.390119196e-05 MLMG: Initial residual (resid0) = 2.390119196e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 9.313139961e-16, 3.896516951e-11 MLMG: Timers: Solve = 0.073639495 Iter = 0.07087029 Bottom = 0.019002536 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2.390119196e-05 MLMG: Initial residual (resid0) = 1.927918833e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 6.68868143e-16, 2.79847191e-11 MLMG: Timers: Solve = 0.071302655 Iter = 0.069414616 Bottom = 0.01733291 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003539796244 MLMG: Initial residual (resid0) = 0.003539796244 MLMG: Final Iter. 8 resid, resid/bnorm = 3.996369208e-16, 1.128982838e-13 MLMG: Timers: Solve = 0.286810225 Iter = 0.280201656 Bottom = 0.002224976 Done calling nodal solver Timestep 1 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05 Timing summary: Advection :0.08691343 seconds MAC Proj :0.154193912 seconds Nodal Proj :0.304974775 seconds Reactions :0.0088731 seconds Misc :0.009240827 seconds Base State :0.005205475 seconds Time to advance time step: 0.564302873 Call to estdt for level 0 gives dt_lev = 0.312932319 Minimum estdt over all levels = 0.312932319 Timestep 2 starts with TIME = 6.08983586e-05 DT = 6.698819446e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.058829419e-05 MLMG: Initial residual (resid0) = 3.058829419e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 2.886154653e-15, 9.435487429e-11 MLMG: Timers: Solve = 0.079878724 Iter = 0.077236407 Bottom = 0.019353202 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.054534589e-05 MLMG: Initial residual (resid0) = 3.717810554e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 2.76515078e-15, 9.052609159e-11 MLMG: Timers: Solve = 0.070161645 Iter = 0.068278038 Bottom = 0.016106804 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003893977911 MLMG: Initial residual (resid0) = 0.003893977911 MLMG: Final Iter. 8 resid, resid/bnorm = 4.465828748e-16, 1.146855183e-13 MLMG: Timers: Solve = 0.287616214 Iter = 0.282108737 Bottom = 0.002223432 Done calling nodal solver Timestep 2 ends with TIME = 0.0001278865531 DT = 6.698819446e-05 Timing summary: Advection :0.080637479 seconds MAC Proj :0.15923655 seconds Nodal Proj :0.306037942 seconds Reactions :0.008003909 seconds Misc :0.005851098 seconds Base State :0.007240454 seconds Time to advance time step: 0.559901391 Call to estdt for level 0 gives dt_lev = 0.3131176585 Minimum estdt over all levels = 0.3131176585 Timestep 3 starts with TIME = 0.0001278865531 DT = 7.368701391e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.965408323e-05 MLMG: Initial residual (resid0) = 3.965408323e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 3.950131956e-15, 9.961475928e-11 MLMG: Timers: Solve = 0.080148467 Iter = 0.077503234 Bottom = 0.019501299 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.959443128e-05 MLMG: Initial residual (resid0) = 3.062077285e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 4.529390101e-16, 1.143946246e-11 MLMG: Timers: Solve = 0.079347517 Iter = 0.077476088 Bottom = 0.019574532 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004283374995 MLMG: Initial residual (resid0) = 0.004283374995 MLMG: Final Iter. 8 resid, resid/bnorm = 4.818194455e-16, 1.12485936e-13 MLMG: Timers: Solve = 0.28278554 Iter = 0.277431665 Bottom = 0.001921994 Done calling nodal solver Timestep 3 ends with TIME = 0.000201573567 DT = 7.368701391e-05 Timing summary: Advection :0.083527541 seconds MAC Proj :0.168854223 seconds Nodal Proj :0.300155637 seconds Reactions :0.006707997 seconds Misc :0.006187897 seconds Base State :0.007452019 seconds Time to advance time step: 0.565533029 Call to estdt for level 0 gives dt_lev = 0.3131175568 Minimum estdt over all levels = 0.3131175568 Timestep 4 starts with TIME = 0.000201573567 DT = 8.10557153e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 5.599956033e-05 MLMG: Initial residual (resid0) = 5.599956033e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 5.164987001e-15, 9.223263489e-11 MLMG: Timers: Solve = 0.080074248 Iter = 0.077485963 Bottom = 0.019473698 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 5.604848971e-05 MLMG: Initial residual (resid0) = 8.539328242e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 1.593672161e-15, 2.843381097e-11 MLMG: Timers: Solve = 0.073124551 Iter = 0.071245681 Bottom = 0.018942353 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004711843462 MLMG: Initial residual (resid0) = 0.004711843462 MLMG: Final Iter. 8 resid, resid/bnorm = 5.353790328e-16, 1.136241127e-13 MLMG: Timers: Solve = 0.290676976 Iter = 0.284184617 Bottom = 0.002087991 Done calling nodal solver Timestep 4 ends with TIME = 0.0002826292823 DT = 8.10557153e-05 Timing summary: Advection :0.081891837 seconds MAC Proj :0.161884975 seconds Nodal Proj :0.30714987 seconds Reactions :0.007606166 seconds Misc :0.00669774 seconds Base State :0.007003529 seconds Time to advance time step: 0.565354424 Call to estdt for level 0 gives dt_lev = 0.3128512671 Minimum estdt over all levels = 0.3128512671 Timestep 5 starts with TIME = 0.0002826292823 DT = 8.916128683e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 7.350752647e-05 MLMG: Initial residual (resid0) = 7.350752647e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 4.789883887e-15, 6.516181563e-11 MLMG: Timers: Solve = 0.080397131 Iter = 0.077714958 Bottom = 0.019649131 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 7.350752648e-05 MLMG: Initial residual (resid0) = 1.260579791e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 1.235045198e-15, 1.680161552e-11 MLMG: Timers: Solve = 0.074129962 Iter = 0.072261317 Bottom = 0.020097341 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.005182753701 MLMG: Initial residual (resid0) = 0.005182753701 MLMG: Final Iter. 8 resid, resid/bnorm = 5.763618749e-16, 1.112076529e-13 MLMG: Timers: Solve = 0.288069764 Iter = 0.282420882 Bottom = 0.002225127 Done calling nodal solver Timestep 5 ends with TIME = 0.0003717905691 DT = 8.916128683e-05 Timing summary: Advection :0.079824112 seconds MAC Proj :0.163747338 seconds Nodal Proj :0.306922825 seconds Reactions :0.007209072 seconds Misc :0.006348344 seconds Base State :0.004613094 seconds Time to advance time step: 0.564163371 Writing plotfile 5 Time to write plotfile: 0.07108321 Total Time: 3.976493294 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [RT_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10400 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.04-204-g82bd805ef145) finalized