Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.04-204-g82bd805ef145) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling InitBaseStateGeometry() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 1 dr of MAESTRO base state = 281250.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 729 radius at r_cutoff 205171875 Maximum HSE Error = 0.500936 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.192157388 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.012732909 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.187605767 Call to firstdt for level 0 gives dt_lev = 0.0004741795922 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922 Call to firstdt for level 1 gives dt_lev = 0.0002743178815 Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815 Minimum firstdt over all levels = 0.0002743178815 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 9701.832847 MLMG: Initial residual (resid0) = 9701.832847 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0003239320107, 3.338874374e-08 MLMG: Timers: Solve = 0.420934843 Iter = 0.4084131 Bottom = 0.001908286 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1641628699 Call to estdt for level 1 gives dt_lev = 0.1158500464 Minimum estdt over all levels = 0.1158500464 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500464 Multiplying dt by init_shrink; dt = 0.1158500464 Ignoring this new dt since it's larger than the previous dt = 0.0002743178815 Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.177774534 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1769558.577 MLMG: Initial residual (resid0) = 1769558.577 MLMG: Final Iter. 7 resid, resid/bnorm = 0.001462541632, 8.265008295e-10 MLMG: Timers: Solve = 0.107437883 Iter = 0.101332296 Bottom = 0.018642232 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1769558.577 MLMG: Initial residual (resid0) = 0.8873402198 MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002626024738, 1.483999892e-10 MLMG: Timers: Solve = 0.051824006 Iter = 0.047082347 Bottom = 0.008721582 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.293089834e+10 MLMG: Initial residual (resid0) = 1.293089834e+10 MLMG: Final Iter. 9 resid, resid/bnorm = 0.05361938477, 4.146609412e-12 MLMG: Timers: Solve = 0.750244213 Iter = 0.734337983 Bottom = 0.003968904 Done calling nodal solver Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.293722461 seconds MAC Proj :0.187627579 seconds Nodal Proj :0.794431746 seconds Reactions :0.057742272 seconds Misc :0.029223327 seconds Base State :0.012814291 seconds Time to advance time step: 1.363039225 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.220715409 Writing checkpoint 0 after all initialization Writing checkpoint reacting_bubble_2d_chk0000000 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 484084.2313 MLMG: Initial residual (resid0) = 484084.2313 MLMG: Final Iter. 7 resid, resid/bnorm = 3.840808686e-05, 7.93417434e-11 MLMG: Timers: Solve = 0.105553012 Iter = 0.10065402 Bottom = 0.018383844 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 484084.2313 MLMG: Initial residual (resid0) = 0.8687137087 MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002688393915, 5.553566386e-10 MLMG: Timers: Solve = 0.051138981 Iter = 0.046159311 Bottom = 0.008062332 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3547177.967 MLMG: Initial residual (resid0) = 3547177.967 MLMG: Final Iter. 9 resid, resid/bnorm = 1.469999552e-05, 4.144138144e-12 MLMG: Timers: Solve = 0.750937809 Iter = 0.736560905 Bottom = 0.003972242 Done calling nodal solver Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.301660714 seconds MAC Proj :0.183892355 seconds Nodal Proj :0.798908088 seconds Reactions :0.059835077 seconds Misc :0.02957461 seconds Base State :0.012878509 seconds Time to advance time step: 1.374177775 Call to estdt for level 0 gives dt_lev = 0.2285173762 Call to estdt for level 1 gives dt_lev = 0.1613607515 Minimum estdt over all levels = 0.1613607515 Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 709086.914 MLMG: Initial residual (resid0) = 709086.914 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005381471729, 7.589297761e-10 MLMG: Timers: Solve = 0.091781918 Iter = 0.086906948 Bottom = 0.016050588 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 709086.9142 MLMG: Initial residual (resid0) = 2.66565127 MLMG: Final Iter. 4 resid, resid/bnorm = 7.441326813e-05, 1.049423796e-10 MLMG: Timers: Solve = 0.066412737 Iter = 0.061626733 Bottom = 0.010370381 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3903898.779 MLMG: Initial residual (resid0) = 3903898.779 MLMG: Final Iter. 9 resid, resid/bnorm = 1.615285873e-05, 4.137622323e-12 MLMG: Timers: Solve = 0.751242802 Iter = 0.733889615 Bottom = 0.004001582 Done calling nodal solver Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696 Timing summary: Advection :0.284693443 seconds MAC Proj :0.185108036 seconds Nodal Proj :0.794647612 seconds Reactions :0.054549218 seconds Misc :0.017449117 seconds Base State :0.014897017 seconds Time to advance time step: 1.336763839 Time to regrid: 0.016234604 Call to estdt for level 0 gives dt_lev = 0.2285301617 Call to estdt for level 1 gives dt_lev = 0.1613816124 Minimum estdt over all levels = 0.1613816124 Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003319246366 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1070292.597 MLMG: Initial residual (resid0) = 1070292.597 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005815309123, 5.433382554e-10 MLMG: Timers: Solve = 0.091601444 Iter = 0.086699081 Bottom = 0.016108699 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1070292.597 MLMG: Initial residual (resid0) = 4.638863335 MLMG: Final Iter. 4 resid, resid/bnorm = 0.0001293691339, 1.208726794e-10 MLMG: Timers: Solve = 0.066229596 Iter = 0.06144654 Bottom = 0.010371696 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 4294287.821 MLMG: Initial residual (resid0) = 4294287.821 MLMG: Final Iter. 9 resid, resid/bnorm = 1.779198647e-05, 4.143175122e-12 MLMG: Timers: Solve = 0.747853808 Iter = 0.733552429 Bottom = 0.003445994 Done calling nodal solver Timestep 3 ends with TIME = 0.0009079921877 DT = 0.0003319246366 Timing summary: Advection :0.284673417 seconds MAC Proj :0.185597132 seconds Nodal Proj :0.792740958 seconds Reactions :0.053026704 seconds Misc :0.016024494 seconds Base State :0.012166849 seconds Time to advance time step: 1.332351 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.174010019 Writing checkpoint 3 Writing checkpoint reacting_bubble_2d_chk0000003 Total Time: 10.59095978 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10029 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.04-204-g82bd805ef145) finalized