Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.04-212-g70e9b1cb70d0) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling InitBaseStateGeometry() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-3d_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.678427073 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.06337883 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.663420384 Call to firstdt for level 0 gives dt_lev = 0.0004741795139 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139 Minimum firstdt over all levels = 0.0004741795139 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 2054.812665 MLMG: Initial residual (resid0) = 2054.812665 MLMG: Final Iter. 7 resid, resid/bnorm = 3.681783767e-10, 1.791785611e-13 MLMG: Timers: Solve = 3.373518382 Iter = 3.311528869 Bottom = 0.026239687 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1719927642 Minimum estdt over all levels = 0.1719927642 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642 Multiplying dt by init_shrink; dt = 0.1719927642 Ignoring this new dt since it's larger than the previous dt = 0.0004741795139 Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.6280549 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2728631.974 MLMG: Initial residual (resid0) = 2728631.974 MLMG: Final Iter. 8 resid, resid/bnorm = 0.000261482317, 9.582908927e-11 MLMG: Timers: Solve = 0.217303069 Iter = 0.212761741 Bottom = 0.162366692 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2728631.974 MLMG: Initial residual (resid0) = 8.815146758 MLMG: Final Iter. 5 resid, resid/bnorm = 7.036000779e-05, 2.578581812e-11 MLMG: Timers: Solve = 0.132178882 Iter = 0.13014494 Bottom = 0.098843462 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.157554389e+10 MLMG: Initial residual (resid0) = 1.157554389e+10 MLMG: Final Iter. 7 resid, resid/bnorm = 0.002905845642, 2.510331842e-13 MLMG: Timers: Solve = 3.400571769 Iter = 3.322129283 Bottom = 0.027049713 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.234909597 seconds MAC Proj :0.368916032 seconds Nodal Proj :3.512509286 seconds Reactions :0.219975321 seconds Misc :0.045999549 seconds Base State :0.009955415 seconds Time to advance time step: 4.38245392 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.673293918 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1308380.192 MLMG: Initial residual (resid0) = 1308380.192 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001229706249, 9.39869204e-11 MLMG: Timers: Solve = 0.224502979 Iter = 0.222255884 Bottom = 0.172256355 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1308382.061 MLMG: Initial residual (resid0) = 8358.144645 MLMG: Final Iter. 6 resid, resid/bnorm = 2.209241211e-05, 1.688529121e-11 MLMG: Timers: Solve = 0.171030581 Iter = 0.168940226 Bottom = 0.131437886 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5488883.997 MLMG: Initial residual (resid0) = 5488883.997 MLMG: Final Iter. 7 resid, resid/bnorm = 1.406879164e-06, 2.563142462e-13 MLMG: Timers: Solve = 3.443796229 Iter = 3.372000048 Bottom = 0.027202447 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.211722884 seconds MAC Proj :0.407783396 seconds Nodal Proj :3.547477926 seconds Reactions :0.217959849 seconds Misc :0.037530938 seconds Base State :0.008376708 seconds Time to advance time step: 4.422606177 Call to estdt for level 0 gives dt_lev = 0.2012294727 Minimum estdt over all levels = 0.2012294727 Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1426180.192 MLMG: Initial residual (resid0) = 1426180.192 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001377801382, 9.660780523e-11 MLMG: Timers: Solve = 0.22708598 Iter = 0.224891679 Bottom = 0.174779633 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1426180.192 MLMG: Initial residual (resid0) = 469315.606 MLMG: Final Iter. 9 resid, resid/bnorm = 1.432512558e-05, 1.004440089e-11 MLMG: Timers: Solve = 0.235283457 Iter = 0.233119092 Bottom = 0.177002668 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6063818.096 MLMG: Initial residual (resid0) = 6063818.096 MLMG: Final Iter. 7 resid, resid/bnorm = 1.567765139e-06, 2.585442232e-13 MLMG: Timers: Solve = 3.408405009 Iter = 3.337324919 Bottom = 0.028178519 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653 Timing summary: Advection :0.17743321 seconds MAC Proj :0.475295627 seconds Nodal Proj :3.510284142 seconds Reactions :0.209386606 seconds Misc :0.017315043 seconds Base State :0.00755924 seconds Time to advance time step: 4.389864274 Call to estdt for level 0 gives dt_lev = 0.2012873349 Minimum estdt over all levels = 0.2012873349 Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1597947.222 MLMG: Initial residual (resid0) = 1597947.222 MLMG: Final Iter. 9 resid, resid/bnorm = 0.0001388676543, 8.690378028e-11 MLMG: Timers: Solve = 0.240247283 Iter = 0.238214574 Bottom = 0.182485495 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1597947.222 MLMG: Initial residual (resid0) = 76609.76196 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001313305458, 8.218703597e-11 MLMG: Timers: Solve = 0.198378078 Iter = 0.196350047 Bottom = 0.14671949 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6670331.571 MLMG: Initial residual (resid0) = 6670331.571 MLMG: Final Iter. 7 resid, resid/bnorm = 1.667358447e-06, 2.499663516e-13 MLMG: Timers: Solve = 3.384700915 Iter = 3.314160346 Bottom = 0.026581888 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118 Timing summary: Advection :0.178664024 seconds MAC Proj :0.450977392 seconds Nodal Proj :3.486732506 seconds Reactions :0.209472997 seconds Misc :0.017569162 seconds Base State :0.00808809 seconds Time to advance time step: 4.343544467 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.632737585 Total Time: 27.99663454 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 7979 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.04-212-g70e9b1cb70d0) finalized