Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.04-222-g0f2e7aae8713) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling InitBaseStateGeometry() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = cutoff densities: low density cutoff (for mapping the model) = 1e-10 buoyancy cutoff density (for zeroing rho - rho_0, centrifugal term) = 5e-10 anelastic cutoff = 1e-10 Maximum HSE Error = 4.547473509e-13 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile RT_pltInitData after InitData Time to write plotfile: 0.063809574 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.004205112 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile RT_pltafter_InitProj after InitProj Time to write plotfile: 0.060996545 Call to firstdt for level 0 gives dt_lev = 0.000608983586 Multiplying dt_lev by init_shrink; dt_lev = 6.08983586e-05 Minimum firstdt over all levels = 6.08983586e-05 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.00402803 Iter = 0 Bottom = 0 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.08660444773 Minimum estdt over all levels = 0.08660444773 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.08660444773 Multiplying dt by init_shrink; dt = 0.008660444773 Ignoring this new dt since it's larger than the previous dt = 6.08983586e-05 Writing plotfile RT_pltafter_DivuIter after final DivuIter Time to write plotfile: 0.055884125 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 6.08983586e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 0.002421164472 MLMG: Initial residual (resid0) = 0.002421164472 MLMG: Final Iter. 9 resid, resid/bnorm = 1.751907785e-13, 7.235806595e-11 MLMG: Timers: Solve = 0.071029356 Iter = 0.069019756 Bottom = 0.018679728 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 0.002421205691 MLMG: Initial residual (resid0) = 2.151449932e-06 MLMG: Final Iter. 7 resid, resid/bnorm = 9.927908779e-14, 4.100398745e-11 MLMG: Timers: Solve = 0.053984217 Iter = 0.052170417 Bottom = 0.01346788 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 58.12657035 MLMG: Initial residual (resid0) = 58.12657035 MLMG: Final Iter. 8 resid, resid/bnorm = 6.671996289e-12, 1.147839318e-13 MLMG: Timers: Solve = 0.276696951 Iter = 0.271128785 Bottom = 0.002216346 Done calling nodal solver Timestep 0 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05 Timing summary: Advection :0.07805572 seconds MAC Proj :0.133679419 seconds Nodal Proj :0.293150255 seconds Reactions :0.008376505 seconds Misc :0.007827383 seconds Base State :0.006891715 seconds Time to advance time step: 0.521242665 Writing plotfile 0 after all initialization Time to write plotfile: 0.11625402 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 6.08983586e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2.394238647e-05 MLMG: Initial residual (resid0) = 2.394238647e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 3.180577685e-16, 1.328429682e-11 MLMG: Timers: Solve = 0.072222747 Iter = 0.069728475 Bottom = 0.01918355 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2.390119196e-05 MLMG: Initial residual (resid0) = 2.092548193e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 6.588243247e-16, 2.756449661e-11 MLMG: Timers: Solve = 0.06837096 Iter = 0.066553089 Bottom = 0.016259781 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003539796244 MLMG: Initial residual (resid0) = 0.003539796244 MLMG: Final Iter. 8 resid, resid/bnorm = 3.950832717e-16, 1.116118681e-13 MLMG: Timers: Solve = 0.271755207 Iter = 0.266016791 Bottom = 0.001970954 Done calling nodal solver Timestep 1 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05 Timing summary: Advection :0.081267263 seconds MAC Proj :0.148949853 seconds Nodal Proj :0.289699425 seconds Reactions :0.008371147 seconds Misc :0.008181368 seconds Base State :0.004151539 seconds Time to advance time step: 0.536608491 Call to estdt for level 0 gives dt_lev = 0.312932319 Minimum estdt over all levels = 0.312932319 Call to estdt at beginning of step 2 gives dt =0.312932319 dt_growth factor limits the new dt = 6.698819446e-05 Timestep 2 starts with TIME = 6.08983586e-05 DT = 6.698819446e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.054534589e-05 MLMG: Initial residual (resid0) = 3.054534589e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 2.755361477e-15, 9.020560732e-11 MLMG: Timers: Solve = 0.076848947 Iter = 0.074449358 Bottom = 0.018664358 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.064382465e-05 MLMG: Initial residual (resid0) = 3.582607616e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 6.500317184e-16, 2.121248656e-11 MLMG: Timers: Solve = 0.069733661 Iter = 0.0679156 Bottom = 0.017835945 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003893977628 MLMG: Initial residual (resid0) = 0.003893977628 MLMG: Final Iter. 8 resid, resid/bnorm = 4.414871246e-16, 1.133769032e-13 MLMG: Timers: Solve = 0.271818652 Iter = 0.266766322 Bottom = 0.002217371 Done calling nodal solver Timestep 2 ends with TIME = 0.0001278865531 DT = 6.698819446e-05 Timing summary: Advection :0.071656077 seconds MAC Proj :0.15524215 seconds Nodal Proj :0.287673288 seconds Reactions :0.007234468 seconds Misc :0.00548904 seconds Base State :0.004904625 seconds Time to advance time step: 0.527430243 Call to estdt for level 0 gives dt_lev = 0.3130441486 Minimum estdt over all levels = 0.3130441486 Call to estdt at beginning of step 3 gives dt =0.3130441486 dt_growth factor limits the new dt = 7.368701391e-05 Timestep 3 starts with TIME = 0.0001278865531 DT = 7.368701391e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.952931745e-05 MLMG: Initial residual (resid0) = 3.952931745e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 3.543044957e-15, 8.963081543e-11 MLMG: Timers: Solve = 0.077560094 Iter = 0.074759347 Bottom = 0.018633134 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.946966516e-05 MLMG: Initial residual (resid0) = 5.779895456e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 3.129558326e-15, 7.929021726e-11 MLMG: Timers: Solve = 0.068213454 Iter = 0.066375908 Bottom = 0.016004423 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004283375283 MLMG: Initial residual (resid0) = 0.004283375283 MLMG: Final Iter. 8 resid, resid/bnorm = 4.844215307e-16, 1.130934132e-13 MLMG: Timers: Solve = 0.271642206 Iter = 0.266147252 Bottom = 0.002237525 Done calling nodal solver Timestep 3 ends with TIME = 0.000201573567 DT = 7.368701391e-05 Timing summary: Advection :0.073595487 seconds MAC Proj :0.156876292 seconds Nodal Proj :0.289598112 seconds Reactions :0.006670376 seconds Misc :0.005816981 seconds Base State :0.00631556 seconds Time to advance time step: 0.532691491 Call to estdt for level 0 gives dt_lev = 0.3131844319 Minimum estdt over all levels = 0.3131844319 Call to estdt at beginning of step 4 gives dt =0.3131844319 dt_growth factor limits the new dt = 8.10557153e-05 Timestep 4 starts with TIME = 0.000201573567 DT = 8.10557153e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 5.606493583e-05 MLMG: Initial residual (resid0) = 5.606493583e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 5.421199751e-15, 9.669501392e-11 MLMG: Timers: Solve = 0.077035513 Iter = 0.074579215 Bottom = 0.018812378 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 5.596081363e-05 MLMG: Initial residual (resid0) = 2.776722478e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 4.21719043e-15, 7.535970542e-11 MLMG: Timers: Solve = 0.069091724 Iter = 0.067257843 Bottom = 0.017092228 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004711712732 MLMG: Initial residual (resid0) = 0.004711712732 MLMG: Final Iter. 8 resid, resid/bnorm = 5.49473661e-16, 1.166186676e-13 MLMG: Timers: Solve = 0.274685 Iter = 0.269653813 Bottom = 0.002251681 Done calling nodal solver Timestep 4 ends with TIME = 0.0002826292823 DT = 8.10557153e-05 Timing summary: Advection :0.075672032 seconds MAC Proj :0.154233199 seconds Nodal Proj :0.290272224 seconds Reactions :0.007211182 seconds Misc :0.006003865 seconds Base State :0.006146889 seconds Time to advance time step: 0.533559419 Call to estdt for level 0 gives dt_lev = 0.3131175221 Minimum estdt over all levels = 0.3131175221 Call to estdt at beginning of step 5 gives dt =0.3131175221 dt_growth factor limits the new dt = 8.916128683e-05 Timestep 5 starts with TIME = 0.0002826292823 DT = 8.916128683e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 7.382659517e-05 MLMG: Initial residual (resid0) = 7.382659517e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 6.038532556e-15, 8.179345861e-11 MLMG: Timers: Solve = 0.077301983 Iter = 0.074837887 Bottom = 0.018694749 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 7.382659517e-05 MLMG: Initial residual (resid0) = 1.259406805e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 2.170358208e-15, 2.939805368e-11 MLMG: Timers: Solve = 0.070420714 Iter = 0.068575716 Bottom = 0.018190076 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.005182884419 MLMG: Initial residual (resid0) = 0.005182884419 MLMG: Final Iter. 8 resid, resid/bnorm = 6.025995675e-16, 1.162672209e-13 MLMG: Timers: Solve = 0.270846857 Iter = 0.266221138 Bottom = 0.002230717 Done calling nodal solver Timestep 5 ends with TIME = 0.0003717905691 DT = 8.916128683e-05 Timing summary: Advection :0.074788582 seconds MAC Proj :0.156636929 seconds Nodal Proj :0.289393164 seconds Reactions :0.0065896 seconds Misc :0.005213942 seconds Base State :0.004617813 seconds Time to advance time step: 0.532758323 Writing plotfile 5 Time to write plotfile: 0.067497419 Total Time: 3.806425143 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [RT_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10391 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.04-222-g0f2e7aae8713) finalized