Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.04-222-g0f2e7aae8713) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling InitBaseStateGeometry() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-3d_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.661322952 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.063366315 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.656656902 Call to firstdt for level 0 gives dt_lev = 0.0004741795139 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139 Minimum firstdt over all levels = 0.0004741795139 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 2054.812665 MLMG: Initial residual (resid0) = 2054.812665 MLMG: Final Iter. 7 resid, resid/bnorm = 3.682920635e-10, 1.792338882e-13 MLMG: Timers: Solve = 3.384432758 Iter = 3.323399766 Bottom = 0.029595603 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1719927642 Minimum estdt over all levels = 0.1719927642 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642 Multiplying dt by init_shrink; dt = 0.1719927642 Ignoring this new dt since it's larger than the previous dt = 0.0004741795139 Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.658653791 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2728631.974 MLMG: Initial residual (resid0) = 2728631.974 MLMG: Final Iter. 9 resid, resid/bnorm = 2.099317499e-05, 7.693663047e-12 MLMG: Timers: Solve = 0.26619413 Iter = 0.261862777 Bottom = 0.204988201 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2728631.974 MLMG: Initial residual (resid0) = 8.815142509 MLMG: Final Iter. 4 resid, resid/bnorm = 0.0001970962029, 7.223260771e-11 MLMG: Timers: Solve = 0.112543527 Iter = 0.110502711 Bottom = 0.085319303 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.157554389e+10 MLMG: Initial residual (resid0) = 1.157554389e+10 MLMG: Final Iter. 7 resid, resid/bnorm = 0.002944350243, 2.543595592e-13 MLMG: Timers: Solve = 3.397074383 Iter = 3.321084971 Bottom = 0.025047179 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.22757066 seconds MAC Proj :0.396963212 seconds Nodal Proj :3.504006813 seconds Reactions :0.212177815 seconds Misc :0.046722125 seconds Base State :0.007931837 seconds Time to advance time step: 4.38756444 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.658044835 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1308380.192 MLMG: Initial residual (resid0) = 1308380.192 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001224719163, 9.360575543e-11 MLMG: Timers: Solve = 0.234617342 Iter = 0.232449445 Bottom = 0.182162592 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1308382.061 MLMG: Initial residual (resid0) = 8358.149736 MLMG: Final Iter. 6 resid, resid/bnorm = 1.552061758e-05, 1.186245062e-11 MLMG: Timers: Solve = 0.172481348 Iter = 0.170346418 Bottom = 0.132196746 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5488883.997 MLMG: Initial residual (resid0) = 5488883.997 MLMG: Final Iter. 7 resid, resid/bnorm = 1.364329364e-06, 2.485622514e-13 MLMG: Timers: Solve = 3.43674178 Iter = 3.366759784 Bottom = 0.027609525 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.220651502 seconds MAC Proj :0.419629896 seconds Nodal Proj :3.539798015 seconds Reactions :0.21519346 seconds Misc :0.040226232 seconds Base State :0.007506257 seconds Time to advance time step: 4.435674995 Call to estdt for level 0 gives dt_lev = 0.2012294726 Minimum estdt over all levels = 0.2012294726 Call to estdt at beginning of step 2 gives dt =0.2012294726 dt_growth factor limits the new dt = 0.0005215974653 Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1426180.192 MLMG: Initial residual (resid0) = 1426180.192 MLMG: Final Iter. 9 resid, resid/bnorm = 3.891306703e-05, 2.728481804e-11 MLMG: Timers: Solve = 0.229030903 Iter = 0.226877506 Bottom = 0.170785583 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1426180.192 MLMG: Initial residual (resid0) = 189632.7955 MLMG: Final Iter. 9 resid, resid/bnorm = 5.452510047e-05, 3.823156483e-11 MLMG: Timers: Solve = 0.283847232 Iter = 0.281824013 Bottom = 0.225423247 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6063818.095 MLMG: Initial residual (resid0) = 6063818.095 MLMG: Final Iter. 7 resid, resid/bnorm = 1.53365545e-06, 2.529191057e-13 MLMG: Timers: Solve = 3.39438605 Iter = 3.324894936 Bottom = 0.028817624 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653 Timing summary: Advection :0.176170989 seconds MAC Proj :0.525208161 seconds Nodal Proj :3.497119799 seconds Reactions :0.201755794 seconds Misc :0.01868125 seconds Base State :0.008377892 seconds Time to advance time step: 4.419113494 Call to estdt for level 0 gives dt_lev = 0.2012873349 Minimum estdt over all levels = 0.2012873349 Call to estdt at beginning of step 3 gives dt =0.2012873349 dt_growth factor limits the new dt = 0.0005737572118 Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1597947.222 MLMG: Initial residual (resid0) = 1597947.222 MLMG: Final Iter. 10 resid, resid/bnorm = 2.520613363e-05, 1.577407143e-11 MLMG: Timers: Solve = 0.2829563 Iter = 0.280808548 Bottom = 0.218603997 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1597947.222 MLMG: Initial residual (resid0) = 398975.5552 MLMG: Final Iter. 9 resid, resid/bnorm = 4.147929906e-05, 2.59578655e-11 MLMG: Timers: Solve = 0.268902561 Iter = 0.266863511 Bottom = 0.210941525 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6670331.564 MLMG: Initial residual (resid0) = 6670331.564 MLMG: Final Iter. 7 resid, resid/bnorm = 1.675041858e-06, 2.511182303e-13 MLMG: Timers: Solve = 3.383315855 Iter = 3.313960803 Bottom = 0.027034389 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118 Timing summary: Advection :0.178736267 seconds MAC Proj :0.564239734 seconds Nodal Proj :3.484201648 seconds Reactions :0.201305752 seconds Misc :0.017867183 seconds Base State :0.007770715 seconds Time to advance time step: 4.446501653 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.62052999 Total Time: 28.11093801 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 7976 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.04-222-g0f2e7aae8713) finalized