Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.04-232-g445ca73ad93a) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling InitBaseStateGeometry() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 1 dr of MAESTRO base state = 281250.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 729 radius at r_cutoff 205171875 Maximum HSE Error = 0.500936 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.189676486 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.012893004 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.195123185 Call to firstdt for level 0 gives dt_lev = 0.0004741795922 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922 Call to firstdt for level 1 gives dt_lev = 0.0002743178815 Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815 Minimum firstdt over all levels = 0.0002743178815 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 9701.832855 MLMG: Initial residual (resid0) = 9701.832855 MLMG: Final Iter. 5 resid, resid/bnorm = 0.000323931936, 3.338873601e-08 MLMG: Timers: Solve = 0.419659474 Iter = 0.407315098 Bottom = 0.001872397 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1641628699 Call to estdt for level 1 gives dt_lev = 0.1158500464 Minimum estdt over all levels = 0.1158500464 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500464 Multiplying dt by init_shrink; dt = 0.1158500464 Ignoring this new dt since it's larger than the previous dt = 0.0002743178815 Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.18378077 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1769558.577 MLMG: Initial residual (resid0) = 1769558.577 MLMG: Final Iter. 7 resid, resid/bnorm = 0.001463282033, 8.269192399e-10 MLMG: Timers: Solve = 0.111135622 Iter = 0.104697502 Bottom = 0.019238991 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1769558.577 MLMG: Initial residual (resid0) = 0.8873402231 MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002616376125, 1.478547339e-10 MLMG: Timers: Solve = 0.053775849 Iter = 0.048748128 Bottom = 0.008761313 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.293089834e+10 MLMG: Initial residual (resid0) = 1.293089834e+10 MLMG: Final Iter. 9 resid, resid/bnorm = 0.05358886719, 4.144249361e-12 MLMG: Timers: Solve = 0.749135105 Iter = 0.732918411 Bottom = 0.003995631 Done calling nodal solver Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.333565969 seconds MAC Proj :0.195199847 seconds Nodal Proj :0.796708085 seconds Reactions :0.058824479 seconds Misc :0.031468703 seconds Base State :0.01157565 seconds Time to advance time step: 1.416056501 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.18640424 Writing checkpoint 0 after all initialization Writing checkpoint reacting_bubble_2d_chk0000000 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 484084.2313 MLMG: Initial residual (resid0) = 484084.2313 MLMG: Final Iter. 7 resid, resid/bnorm = 3.840812939e-05, 7.934183125e-11 MLMG: Timers: Solve = 0.109488674 Iter = 0.104272284 Bottom = 0.018840676 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 484084.2313 MLMG: Initial residual (resid0) = 0.8687136763 MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002688794347, 5.554393582e-10 MLMG: Timers: Solve = 0.053019846 Iter = 0.047888105 Bottom = 0.008300973 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3547177.967 MLMG: Initial residual (resid0) = 3547177.967 MLMG: Final Iter. 9 resid, resid/bnorm = 1.473166049e-05, 4.153064949e-12 MLMG: Timers: Solve = 0.750249425 Iter = 0.735497243 Bottom = 0.004005802 Done calling nodal solver Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.332617798 seconds MAC Proj :0.190534204 seconds Nodal Proj :0.799812928 seconds Reactions :0.06289126 seconds Misc :0.0311579 seconds Base State :0.012264395 seconds Time to advance time step: 1.417335058 Call to estdt for level 0 gives dt_lev = 0.2285173762 Call to estdt for level 1 gives dt_lev = 0.1613607515 Minimum estdt over all levels = 0.1613607515 Call to estdt at beginning of step 2 gives dt =0.1613607515 dt_growth factor limits the new dt = 0.0003017496696 Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 709086.914 MLMG: Initial residual (resid0) = 709086.914 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005378660524, 7.585333218e-10 MLMG: Timers: Solve = 0.094541045 Iter = 0.089458337 Bottom = 0.016494154 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 709086.9142 MLMG: Initial residual (resid0) = 2.665656653 MLMG: Final Iter. 4 resid, resid/bnorm = 7.444626064e-05, 1.049889078e-10 MLMG: Timers: Solve = 0.070050646 Iter = 0.064959801 Bottom = 0.011057772 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3903898.779 MLMG: Initial residual (resid0) = 3903898.779 MLMG: Final Iter. 9 resid, resid/bnorm = 1.619383693e-05, 4.148119058e-12 MLMG: Timers: Solve = 0.751174574 Iter = 0.736111453 Bottom = 0.004028059 Done calling nodal solver Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696 Timing summary: Advection :0.319844826 seconds MAC Proj :0.19327777 seconds Nodal Proj :0.798296196 seconds Reactions :0.056185211 seconds Misc :0.018361415 seconds Base State :0.013177228 seconds Time to advance time step: 1.386224724 Time to regrid: 0.018089767 Call to estdt for level 0 gives dt_lev = 0.2285301617 Call to estdt for level 1 gives dt_lev = 0.1613816124 Minimum estdt over all levels = 0.1613816124 Call to estdt at beginning of step 3 gives dt =0.1613816124 dt_growth factor limits the new dt = 0.0003319246366 Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003319246366 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1070292.597 MLMG: Initial residual (resid0) = 1070292.597 MLMG: Final Iter. 6 resid, resid/bnorm = 0.000581531046, 5.433383803e-10 MLMG: Timers: Solve = 0.095219233 Iter = 0.090045457 Bottom = 0.016616932 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1070292.597 MLMG: Initial residual (resid0) = 4.638863321 MLMG: Final Iter. 4 resid, resid/bnorm = 0.0001293690113, 1.208725648e-10 MLMG: Timers: Solve = 0.069041613 Iter = 0.063899373 Bottom = 0.010991493 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 4294287.821 MLMG: Initial residual (resid0) = 4294287.821 MLMG: Final Iter. 9 resid, resid/bnorm = 1.778081059e-05, 4.140572625e-12 MLMG: Timers: Solve = 0.746235014 Iter = 0.731656885 Bottom = 0.004012471 Done calling nodal solver Timestep 3 ends with TIME = 0.0009079921877 DT = 0.0003319246366 Timing summary: Advection :0.317184305 seconds MAC Proj :0.193347304 seconds Nodal Proj :0.79385553 seconds Reactions :0.058555963 seconds Misc :0.018138644 seconds Base State :0.011132084 seconds Time to advance time step: 1.381349348 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.182049781 Writing checkpoint 3 Writing checkpoint reacting_bubble_2d_chk0000003 Total Time: 10.6637044 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10026 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.04-232-g445ca73ad93a) finalized