Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.04-232-g445ca73ad93a) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling InitBaseStateGeometry() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-3d_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.662116616 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.06259127 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.640299071 Call to firstdt for level 0 gives dt_lev = 0.0004741795139 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139 Minimum firstdt over all levels = 0.0004741795139 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 2054.812665 MLMG: Initial residual (resid0) = 2054.812665 MLMG: Final Iter. 7 resid, resid/bnorm = 3.685052263e-10, 1.793376265e-13 MLMG: Timers: Solve = 3.375253499 Iter = 3.314548715 Bottom = 0.026931341 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1719927642 Minimum estdt over all levels = 0.1719927642 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642 Multiplying dt by init_shrink; dt = 0.1719927642 Ignoring this new dt since it's larger than the previous dt = 0.0004741795139 Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.709180528 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2728631.974 MLMG: Initial residual (resid0) = 2728631.974 MLMG: Final Iter. 9 resid, resid/bnorm = 1.571536995e-05, 5.759431871e-12 MLMG: Timers: Solve = 0.248014879 Iter = 0.243610454 Bottom = 0.186487718 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2728627.802 MLMG: Initial residual (resid0) = 8728.675119 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0002207377693, 8.089698752e-11 MLMG: Timers: Solve = 0.149366308 Iter = 0.147266167 Bottom = 0.115749489 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.15755262e+10 MLMG: Initial residual (resid0) = 1.15755262e+10 MLMG: Final Iter. 7 resid, resid/bnorm = 0.002935409546, 2.535875688e-13 MLMG: Timers: Solve = 3.433107891 Iter = 3.358039196 Bottom = 0.028611714 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.222624671 seconds MAC Proj :0.415368613 seconds Nodal Proj :3.538504244 seconds Reactions :0.188265042 seconds Misc :0.046968005 seconds Base State :0.00851968 seconds Time to advance time step: 4.411895353 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.721983171 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1308378.371 MLMG: Initial residual (resid0) = 1308378.371 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001230180787, 9.402332039e-11 MLMG: Timers: Solve = 0.248974989 Iter = 0.246747653 Bottom = 0.196493254 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1308380.242 MLMG: Initial residual (resid0) = 8728.549413 MLMG: Final Iter. 6 resid, resid/bnorm = 1.379838942e-05, 1.054616157e-11 MLMG: Timers: Solve = 0.175713054 Iter = 0.173543226 Bottom = 0.135840321 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5488883.992 MLMG: Initial residual (resid0) = 5488883.992 MLMG: Final Iter. 7 resid, resid/bnorm = 1.471082214e-06, 2.680111688e-13 MLMG: Timers: Solve = 3.388098657 Iter = 3.319952791 Bottom = 0.02802891 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.20035564 seconds MAC Proj :0.436647494 seconds Nodal Proj :3.485857543 seconds Reactions :0.200782999 seconds Misc :0.035845148 seconds Base State :0.007555393 seconds Time to advance time step: 4.359660266 Call to estdt for level 0 gives dt_lev = 0.2012294723 Minimum estdt over all levels = 0.2012294723 Call to estdt at beginning of step 2 gives dt =0.2012294723 dt_growth factor limits the new dt = 0.0005215974653 Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1426181.406 MLMG: Initial residual (resid0) = 1426181.406 MLMG: Final Iter. 9 resid, resid/bnorm = 3.414438834e-05, 2.394112573e-11 MLMG: Timers: Solve = 0.250624285 Iter = 0.248423681 Bottom = 0.1919298 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1426291.684 MLMG: Initial residual (resid0) = 36464.13134 MLMG: Final Iter. 9 resid, resid/bnorm = 2.096966624e-05, 1.47022285e-11 MLMG: Timers: Solve = 0.265900801 Iter = 0.263799101 Bottom = 0.207410024 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6063485.847 MLMG: Initial residual (resid0) = 6063485.847 MLMG: Final Iter. 8 resid, resid/bnorm = 5.392251163e-05, 8.892988784e-12 MLMG: Timers: Solve = 3.847298741 Iter = 3.778915106 Bottom = 0.032803353 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653 Timing summary: Advection :0.174944994 seconds MAC Proj :0.528067016 seconds Nodal Proj :3.947933915 seconds Reactions :0.194529941 seconds Misc :0.016933566 seconds Base State :0.009499683 seconds Time to advance time step: 4.862576222 Call to estdt for level 0 gives dt_lev = 0.2012666333 Minimum estdt over all levels = 0.2012666333 Call to estdt at beginning of step 3 gives dt =0.2012666333 dt_growth factor limits the new dt = 0.0005737572118 Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1597824.954 MLMG: Initial residual (resid0) = 1597824.954 MLMG: Final Iter. 9 resid, resid/bnorm = 0.0001231032, 7.70442342e-11 MLMG: Timers: Solve = 0.240221672 Iter = 0.238027061 Bottom = 0.181465366 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1597946.236 MLMG: Initial residual (resid0) = 56931.55493 MLMG: Final Iter. 9 resid, resid/bnorm = 3.416482286e-05, 2.138045831e-11 MLMG: Timers: Solve = 0.241262011 Iter = 0.239146653 Bottom = 0.182921036 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6669975.866 MLMG: Initial residual (resid0) = 6669975.866 MLMG: Final Iter. 8 resid, resid/bnorm = 2.928613692e-05, 4.390741063e-12 MLMG: Timers: Solve = 3.84780476 Iter = 3.779981601 Bottom = 0.033522087 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118 Timing summary: Advection :0.172488559 seconds MAC Proj :0.492979894 seconds Nodal Proj :3.949057091 seconds Reactions :0.194730483 seconds Misc :0.016620523 seconds Base State :0.008607925 seconds Time to advance time step: 4.826043403 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.599596055 Total Time: 28.93393121 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 7977 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.04-232-g445ca73ad93a) finalized