Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.04-234-gd04999c60f76) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling InitBaseStateGeometry() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = cutoff densities: low density cutoff (for mapping the model) = 1e-10 buoyancy cutoff density (for zeroing rho - rho_0, centrifugal term) = 5e-10 anelastic cutoff = 1e-10 Maximum HSE Error = 4.547473509e-13 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile RT_pltInitData after InitData Time to write plotfile: 0.061303257 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.004103215 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile RT_pltafter_InitProj after InitProj Time to write plotfile: 0.061439175 Call to firstdt for level 0 gives dt_lev = 0.000608983586 Multiplying dt_lev by init_shrink; dt_lev = 6.08983586e-05 Minimum firstdt over all levels = 6.08983586e-05 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.003909559 Iter = 0 Bottom = 0 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.08660444773 Minimum estdt over all levels = 0.08660444773 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.08660444773 Multiplying dt by init_shrink; dt = 0.008660444773 Ignoring this new dt since it's larger than the previous dt = 6.08983586e-05 Writing plotfile RT_pltafter_DivuIter after final DivuIter Time to write plotfile: 0.056101697 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 6.08983586e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 0.002421164472 MLMG: Initial residual (resid0) = 0.002421164472 MLMG: Final Iter. 9 resid, resid/bnorm = 1.751907753e-13, 7.235806462e-11 MLMG: Timers: Solve = 0.071090355 Iter = 0.069074691 Bottom = 0.018724816 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 0.002421205691 MLMG: Initial residual (resid0) = 2.151449932e-06 MLMG: Final Iter. 7 resid, resid/bnorm = 9.927908752e-14, 4.100398734e-11 MLMG: Timers: Solve = 0.054114134 Iter = 0.05229236 Bottom = 0.013486714 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 58.12657035 MLMG: Initial residual (resid0) = 58.12657035 MLMG: Final Iter. 8 resid, resid/bnorm = 6.700417998e-12, 1.152728943e-13 MLMG: Timers: Solve = 0.278258877 Iter = 0.273001104 Bottom = 0.002321191 Done calling nodal solver Timestep 0 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05 Timing summary: Advection :0.079439661 seconds MAC Proj :0.133947721 seconds Nodal Proj :0.294243252 seconds Reactions :0.008084835 seconds Misc :0.00751686 seconds Base State :0.006139594 seconds Time to advance time step: 0.523377935 Writing plotfile 0 after all initialization Time to write plotfile: 0.060235571 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 6.08983586e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2.394238647e-05 MLMG: Initial residual (resid0) = 2.394238647e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 3.181029909e-16, 1.328618562e-11 MLMG: Timers: Solve = 0.072039232 Iter = 0.06953912 Bottom = 0.019121444 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2.390119196e-05 MLMG: Initial residual (resid0) = 2.092548132e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 6.588241405e-16, 2.75644889e-11 MLMG: Timers: Solve = 0.067996608 Iter = 0.066165054 Bottom = 0.016271989 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003539796244 MLMG: Initial residual (resid0) = 0.003539796244 MLMG: Final Iter. 8 resid, resid/bnorm = 3.916138247e-16, 1.10631742e-13 MLMG: Timers: Solve = 0.273882742 Iter = 0.267478 Bottom = 0.002210748 Done calling nodal solver Timestep 1 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05 Timing summary: Advection :0.073897399 seconds MAC Proj :0.148807387 seconds Nodal Proj :0.290899846 seconds Reactions :0.00774638 seconds Misc :0.007620919 seconds Base State :0.004616375 seconds Time to advance time step: 0.529108666 Call to estdt for level 0 gives dt_lev = 0.312932319 Minimum estdt over all levels = 0.312932319 Call to estdt at beginning of step 2 gives dt =0.312932319 dt_growth factor limits the new dt = 6.698819446e-05 Timestep 2 starts with TIME = 6.08983586e-05 DT = 6.698819446e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.058829419e-05 MLMG: Initial residual (resid0) = 3.058829419e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 2.886154706e-15, 9.435487602e-11 MLMG: Timers: Solve = 0.076978682 Iter = 0.074584606 Bottom = 0.01871536 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.067723573e-05 MLMG: Initial residual (resid0) = 3.71790009e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 2.340902378e-15, 7.630747432e-11 MLMG: Timers: Solve = 0.068551652 Iter = 0.066737538 Bottom = 0.016558106 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003894028839 MLMG: Initial residual (resid0) = 0.003894028839 MLMG: Final Iter. 8 resid, resid/bnorm = 4.428965875e-16, 1.137373671e-13 MLMG: Timers: Solve = 0.273735488 Iter = 0.269195965 Bottom = 0.002021012 Done calling nodal solver Timestep 2 ends with TIME = 0.0001278865531 DT = 6.698819446e-05 Timing summary: Advection :0.07416794 seconds MAC Proj :0.154121384 seconds Nodal Proj :0.289532362 seconds Reactions :0.007756578 seconds Misc :0.005451027 seconds Base State :0.005526879 seconds Time to advance time step: 0.531181384 Call to estdt for level 0 gives dt_lev = 0.312992006 Minimum estdt over all levels = 0.312992006 Call to estdt at beginning of step 3 gives dt =0.312992006 dt_growth factor limits the new dt = 7.368701391e-05 Timestep 3 starts with TIME = 0.0001278865531 DT = 7.368701391e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.952974666e-05 MLMG: Initial residual (resid0) = 3.952974666e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 3.587381837e-15, 9.075145026e-11 MLMG: Timers: Solve = 0.077032213 Iter = 0.074559752 Bottom = 0.018753258 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.947006476e-05 MLMG: Initial residual (resid0) = 1.249979213e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 2.860950206e-15, 7.248405147e-11 MLMG: Timers: Solve = 0.069230089 Iter = 0.067390316 Bottom = 0.01653828 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004283324072 MLMG: Initial residual (resid0) = 0.004283324072 MLMG: Final Iter. 8 resid, resid/bnorm = 4.93095148e-16, 1.151197387e-13 MLMG: Timers: Solve = 0.275190934 Iter = 0.269062619 Bottom = 0.002558227 Done calling nodal solver Timestep 3 ends with TIME = 0.000201573567 DT = 7.368701391e-05 Timing summary: Advection :0.080223897 seconds MAC Proj :0.154360005 seconds Nodal Proj :0.293057859 seconds Reactions :0.006635675 seconds Misc :0.005473989 seconds Base State :0.006148119 seconds Time to advance time step: 0.539883419 Call to estdt for level 0 gives dt_lev = 0.3132319229 Minimum estdt over all levels = 0.3132319229 Call to estdt at beginning of step 4 gives dt =0.3132319229 dt_growth factor limits the new dt = 8.10557153e-05 Timestep 4 starts with TIME = 0.000201573567 DT = 8.10557153e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 5.606473325e-05 MLMG: Initial residual (resid0) = 5.606473325e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 5.403514338e-15, 9.637991702e-11 MLMG: Timers: Solve = 0.078272239 Iter = 0.075722223 Bottom = 0.018952695 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 5.596061117e-05 MLMG: Initial residual (resid0) = 9.407589519e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 5.445912731e-15, 9.73168916e-11 MLMG: Timers: Solve = 0.069129323 Iter = 0.067283495 Bottom = 0.016160236 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004711712732 MLMG: Initial residual (resid0) = 0.004711712732 MLMG: Final Iter. 8 resid, resid/bnorm = 5.388484797e-16, 1.143636105e-13 MLMG: Timers: Solve = 0.270687163 Iter = 0.266122871 Bottom = 0.001980656 Done calling nodal solver Timestep 4 ends with TIME = 0.0002826292823 DT = 8.10557153e-05 Timing summary: Advection :0.07695232 seconds MAC Proj :0.155719139 seconds Nodal Proj :0.286748842 seconds Reactions :0.007134104 seconds Misc :0.005168584 seconds Base State :0.007002094 seconds Time to advance time step: 0.531857272 Call to estdt for level 0 gives dt_lev = 0.3131175201 Minimum estdt over all levels = 0.3131175201 Call to estdt at beginning of step 5 gives dt =0.3131175201 dt_growth factor limits the new dt = 8.916128683e-05 Timestep 5 starts with TIME = 0.0002826292823 DT = 8.916128683e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 7.397963533e-05 MLMG: Initial residual (resid0) = 7.397963533e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 6.610380434e-15, 8.935405541e-11 MLMG: Timers: Solve = 0.077842539 Iter = 0.075445727 Bottom = 0.018901195 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 7.382659515e-05 MLMG: Initial residual (resid0) = 1.340939054e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 8.484070994e-16, 1.149188985e-11 MLMG: Timers: Solve = 0.075933227 Iter = 0.074080504 Bottom = 0.017541858 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.005182884419 MLMG: Initial residual (resid0) = 0.005182884419 MLMG: Final Iter. 8 resid, resid/bnorm = 5.898059818e-16, 1.137987912e-13 MLMG: Timers: Solve = 0.274457248 Iter = 0.269766399 Bottom = 0.001970991 Done calling nodal solver Timestep 5 ends with TIME = 0.0003717905691 DT = 8.916128683e-05 Timing summary: Advection :0.074546346 seconds MAC Proj :0.162477632 seconds Nodal Proj :0.291720167 seconds Reactions :0.006585522 seconds Misc :0.005400685 seconds Base State :0.005125852 seconds Time to advance time step: 0.540881292 Writing plotfile 5 Time to write plotfile: 0.069318082 Total Time: 3.76015987 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [RT_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10390 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.04-234-gd04999c60f76) finalized