Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.04-234-gd04999c60f76) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling InitBaseStateGeometry() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-3d_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.66432492 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.062973994 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.635953953 Call to firstdt for level 0 gives dt_lev = 0.0004741795139 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139 Minimum firstdt over all levels = 0.0004741795139 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 2054.812665 MLMG: Initial residual (resid0) = 2054.812665 MLMG: Final Iter. 7 resid, resid/bnorm = 3.692477435e-10, 1.796989817e-13 MLMG: Timers: Solve = 3.374619592 Iter = 3.313878378 Bottom = 0.026413671 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1719927642 Minimum estdt over all levels = 0.1719927642 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642 Multiplying dt by init_shrink; dt = 0.1719927642 Ignoring this new dt since it's larger than the previous dt = 0.0004741795139 Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.62285632 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2728631.974 MLMG: Initial residual (resid0) = 2728631.974 MLMG: Final Iter. 9 resid, resid/bnorm = 1.635891385e-05, 5.995280423e-12 MLMG: Timers: Solve = 0.258158042 Iter = 0.253828649 Bottom = 0.198274213 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2728627.797 MLMG: Initial residual (resid0) = 8728.892478 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0002654236741, 9.727368255e-11 MLMG: Timers: Solve = 0.147563772 Iter = 0.145550181 Bottom = 0.115019445 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.157552618e+10 MLMG: Initial residual (resid0) = 1.157552618e+10 MLMG: Final Iter. 7 resid, resid/bnorm = 0.003150522709, 2.72171015e-13 MLMG: Timers: Solve = 3.385957268 Iter = 3.307456221 Bottom = 0.026977658 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.216847948 seconds MAC Proj :0.423107068 seconds Nodal Proj :3.495552039 seconds Reactions :0.201705441 seconds Misc :0.045808055 seconds Base State :0.00669878 seconds Time to advance time step: 4.383178632 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.638826619 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1308378.367 MLMG: Initial residual (resid0) = 1308378.367 MLMG: Final Iter. 8 resid, resid/bnorm = 0.000125548002, 9.595695339e-11 MLMG: Timers: Solve = 0.229270718 Iter = 0.227156003 Bottom = 0.178153514 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1308380.235 MLMG: Initial residual (resid0) = 8727.993864 MLMG: Final Iter. 6 resid, resid/bnorm = 2.072191455e-05, 1.583783826e-11 MLMG: Timers: Solve = 0.155944197 Iter = 0.15393669 Bottom = 0.11734057 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5488883.997 MLMG: Initial residual (resid0) = 5488883.997 MLMG: Final Iter. 7 resid, resid/bnorm = 1.371430699e-06, 2.49856018e-13 MLMG: Timers: Solve = 3.378418647 Iter = 3.307613975 Bottom = 0.030265452 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.19996119 seconds MAC Proj :0.396860595 seconds Nodal Proj :3.478918417 seconds Reactions :0.199775745 seconds Misc :0.036081505 seconds Base State :0.007533823 seconds Time to advance time step: 4.311769722 Call to estdt for level 0 gives dt_lev = 0.2012294727 Minimum estdt over all levels = 0.2012294727 Call to estdt at beginning of step 2 gives dt =0.2012294727 dt_growth factor limits the new dt = 0.0005215974653 Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1426180.192 MLMG: Initial residual (resid0) = 1426180.192 MLMG: Final Iter. 9 resid, resid/bnorm = 1.726151873e-05, 1.210332245e-11 MLMG: Timers: Solve = 0.247919859 Iter = 0.245813069 Bottom = 0.190975094 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1426291.688 MLMG: Initial residual (resid0) = 36460.70947 MLMG: Final Iter. 9 resid, resid/bnorm = 3.139053724e-05, 2.200849764e-11 MLMG: Timers: Solve = 0.221944976 Iter = 0.219940791 Bottom = 0.165173939 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6063485.841 MLMG: Initial residual (resid0) = 6063485.841 MLMG: Final Iter. 7 resid, resid/bnorm = 3.016134708e-05, 4.97425868e-12 MLMG: Timers: Solve = 3.383716948 Iter = 3.315647518 Bottom = 0.030357186 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653 Timing summary: Advection :0.171127982 seconds MAC Proj :0.481725754 seconds Nodal Proj :3.483913388 seconds Reactions :0.183068856 seconds Misc :0.017562778 seconds Base State :0.008977402 seconds Time to advance time step: 4.337555577 Call to estdt for level 0 gives dt_lev = 0.201266633 Minimum estdt over all levels = 0.201266633 Call to estdt at beginning of step 3 gives dt =0.201266633 dt_growth factor limits the new dt = 0.0005737572118 Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1597713.456 MLMG: Initial residual (resid0) = 1597713.456 MLMG: Final Iter. 9 resid, resid/bnorm = 5.229222663e-05, 3.272941492e-11 MLMG: Timers: Solve = 0.248637824 Iter = 0.24652725 Bottom = 0.191614703 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1597946.234 MLMG: Initial residual (resid0) = 39075.21768 MLMG: Final Iter. 9 resid, resid/bnorm = 2.8524026e-05, 1.785042913e-11 MLMG: Timers: Solve = 0.229309993 Iter = 0.227302796 Bottom = 0.172121165 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6669975.865 MLMG: Initial residual (resid0) = 6669975.865 MLMG: Final Iter. 7 resid, resid/bnorm = 3.402591813e-05, 5.10135551e-12 MLMG: Timers: Solve = 3.375608608 Iter = 3.307321834 Bottom = 0.027665688 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118 Timing summary: Advection :0.171644091 seconds MAC Proj :0.489660264 seconds Nodal Proj :3.47590803 seconds Reactions :0.195558897 seconds Misc :0.017209776 seconds Base State :0.008453835 seconds Time to advance time step: 4.35012552 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.615064615 Total Time: 27.7062857 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 7977 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.04-234-gd04999c60f76) finalized