Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.04-243-gbce44ba71508) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling InitBaseStateGeometry() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 1 dr of MAESTRO base state = 281250.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 729 radius at r_cutoff 205171875 Maximum HSE Error = 0.500936 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.18778092 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.01272412 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.191293946 Call to firstdt for level 0 gives dt_lev = 0.0004741795922 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922 Call to firstdt for level 1 gives dt_lev = 0.0002743178815 Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815 Minimum firstdt over all levels = 0.0002743178815 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 9701.832854 MLMG: Initial residual (resid0) = 9701.832854 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0003239318079, 3.338872281e-08 MLMG: Timers: Solve = 0.41994575 Iter = 0.406986483 Bottom = 0.001849869 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1641628699 Call to estdt for level 1 gives dt_lev = 0.1158500464 Minimum estdt over all levels = 0.1158500464 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500464 Multiplying dt by init_shrink; dt = 0.1158500464 Ignoring this new dt since it's larger than the previous dt = 0.0002743178815 Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.18387008 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1769558.577 MLMG: Initial residual (resid0) = 1769558.577 MLMG: Final Iter. 7 resid, resid/bnorm = 0.001462587049, 8.265264953e-10 MLMG: Timers: Solve = 0.112113289 Iter = 0.105510181 Bottom = 0.019293832 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1769558.577 MLMG: Initial residual (resid0) = 0.887340219 MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002616687787, 1.478723463e-10 MLMG: Timers: Solve = 0.053413988 Iter = 0.04830905 Bottom = 0.008804829 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.293089834e+10 MLMG: Initial residual (resid0) = 1.293089834e+10 MLMG: Final Iter. 9 resid, resid/bnorm = 0.05358123779, 4.143659348e-12 MLMG: Timers: Solve = 0.747032352 Iter = 0.73170284 Bottom = 0.003460516 Done calling nodal solver Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.328490973 seconds MAC Proj :0.196440957 seconds Nodal Proj :0.793769907 seconds Reactions :0.057696721 seconds Misc :0.032097597 seconds Base State :0.012245347 seconds Time to advance time step: 1.408768196 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.18129027 Writing checkpoint 0 after all initialization Writing checkpoint reacting_bubble_2d_chk0000000 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 484084.2313 MLMG: Initial residual (resid0) = 484084.2313 MLMG: Final Iter. 7 resid, resid/bnorm = 3.84081405e-05, 7.93418542e-11 MLMG: Timers: Solve = 0.109488278 Iter = 0.104293795 Bottom = 0.018964303 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 484084.2313 MLMG: Initial residual (resid0) = 0.8687136461 MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002687752604, 5.552241594e-10 MLMG: Timers: Solve = 0.05641275 Iter = 0.051431453 Bottom = 0.008389261 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3547177.967 MLMG: Initial residual (resid0) = 3547177.967 MLMG: Final Iter. 9 resid, resid/bnorm = 1.472607255e-05, 4.151489631e-12 MLMG: Timers: Solve = 0.743433313 Iter = 0.728944146 Bottom = 0.003971383 Done calling nodal solver Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.33418769 seconds MAC Proj :0.19485833 seconds Nodal Proj :0.791834822 seconds Reactions :0.063091873 seconds Misc :0.032742661 seconds Base State :0.012843437 seconds Time to advance time step: 1.416998334 Call to estdt for level 0 gives dt_lev = 0.2285173762 Call to estdt for level 1 gives dt_lev = 0.1613607515 Minimum estdt over all levels = 0.1613607515 Call to estdt at beginning of step 2 gives dt =0.1613607515 dt_growth factor limits the new dt = 0.0003017496696 Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 709086.914 MLMG: Initial residual (resid0) = 709086.914 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005381946787, 7.589967719e-10 MLMG: Timers: Solve = 0.096157439 Iter = 0.090988957 Bottom = 0.016743801 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 709086.9142 MLMG: Initial residual (resid0) = 2.665652611 MLMG: Final Iter. 4 resid, resid/bnorm = 7.442122718e-05, 1.04953604e-10 MLMG: Timers: Solve = 0.069393324 Iter = 0.064418121 Bottom = 0.011034958 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3903898.779 MLMG: Initial residual (resid0) = 3903898.779 MLMG: Final Iter. 9 resid, resid/bnorm = 1.616403461e-05, 4.140485069e-12 MLMG: Timers: Solve = 0.743669959 Iter = 0.729303514 Bottom = 0.003949026 Done calling nodal solver Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696 Timing summary: Advection :0.319922445 seconds MAC Proj :0.194413928 seconds Nodal Proj :0.788997162 seconds Reactions :0.05804383 seconds Misc :0.017658383 seconds Base State :0.011960366 seconds Time to advance time step: 1.379330321 Time to regrid: 0.018014069 Call to estdt for level 0 gives dt_lev = 0.2285301617 Call to estdt for level 1 gives dt_lev = 0.1613816124 Minimum estdt over all levels = 0.1613816124 Call to estdt at beginning of step 3 gives dt =0.1613816124 dt_growth factor limits the new dt = 0.0003319246366 Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003319246366 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1070292.597 MLMG: Initial residual (resid0) = 1070292.597 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005809742506, 5.42818153e-10 MLMG: Timers: Solve = 0.095734458 Iter = 0.090431947 Bottom = 0.016875259 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1070292.597 MLMG: Initial residual (resid0) = 15.33717893 MLMG: Final Iter. 4 resid, resid/bnorm = 0.0001290289828, 1.20554868e-10 MLMG: Timers: Solve = 0.068078498 Iter = 0.063073592 Bottom = 0.009783843 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 4294287.821 MLMG: Initial residual (resid0) = 4294287.821 MLMG: Final Iter. 9 resid, resid/bnorm = 1.78180635e-05, 4.149247615e-12 MLMG: Timers: Solve = 0.741234082 Iter = 0.726864422 Bottom = 0.003627475 Done calling nodal solver Timestep 3 ends with TIME = 0.0009079921877 DT = 0.0003319246366 Timing summary: Advection :0.316762042 seconds MAC Proj :0.192719271 seconds Nodal Proj :0.78801394 seconds Reactions :0.057948555 seconds Misc :0.016865375 seconds Base State :0.012473599 seconds Time to advance time step: 1.372561576 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.180539 Writing checkpoint 3 Writing checkpoint reacting_bubble_2d_chk0000003 Total Time: 10.58094963 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10029 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.04-243-gbce44ba71508) finalized