Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.04-251-g47882ba850b9) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 1 dr of MAESTRO base state = 281250.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 729 radius at r_cutoff 205171875 Maximum HSE Error = 0.500936 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.185497523 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.012760586 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.185145295 Call to firstdt for level 0 gives dt_lev = 0.0004741795922 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922 Call to firstdt for level 1 gives dt_lev = 0.0002743178815 Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815 Minimum firstdt over all levels = 0.0002743178815 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 9701.831933 MLMG: Initial residual (resid0) = 9701.831933 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0003237193731, 3.336682962e-08 MLMG: Timers: Solve = 0.418947085 Iter = 0.406752281 Bottom = 0.002181536 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1641628699 Call to estdt for level 1 gives dt_lev = 0.1158500464 Minimum estdt over all levels = 0.1158500464 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500464 Multiplying dt by init_shrink; dt = 0.1158500464 Ignoring this new dt since it's larger than the previous dt = 0.0002743178815 Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.178848377 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1769558.41 MLMG: Initial residual (resid0) = 1769558.41 MLMG: Final Iter. 7 resid, resid/bnorm = 0.001491436004, 8.428294855e-10 MLMG: Timers: Solve = 0.110357902 Iter = 0.104032391 Bottom = 0.017597278 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1769522.993 MLMG: Initial residual (resid0) = 305775.5832 MLMG: Final Iter. 7 resid, resid/bnorm = 0.0005327507255, 3.010702475e-10 MLMG: Timers: Solve = 0.111119903 Iter = 0.106159898 Bottom = 0.018184706 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.294015887e+10 MLMG: Initial residual (resid0) = 1.294015887e+10 MLMG: Final Iter. 12 resid, resid/bnorm = 0.07882011384, 6.091124122e-12 MLMG: Timers: Solve = 0.999655554 Iter = 0.983406692 Bottom = 0.005258863 Done calling nodal solver Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.301344031 seconds MAC Proj :0.251376957 seconds Nodal Proj :1.047933753 seconds Reactions :0.055365621 seconds Misc :0.034263127 seconds Base State :0.015684614 seconds Time to advance time step: 1.690560977 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.175092311 Writing checkpoint 0 after all initialization Writing checkpoint reacting_bubble_2d_chk0000000 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1442747.345 MLMG: Initial residual (resid0) = 1442747.345 MLMG: Final Iter. 7 resid, resid/bnorm = 0.000891419144, 6.178622663e-10 MLMG: Timers: Solve = 0.114083236 Iter = 0.108939693 Bottom = 0.018488137 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1449047.043 MLMG: Initial residual (resid0) = 137162.7084 MLMG: Final Iter. 6 resid, resid/bnorm = 0.001008385472, 6.958956071e-10 MLMG: Timers: Solve = 0.096058291 Iter = 0.091141353 Bottom = 0.01645476 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3592764.091 MLMG: Initial residual (resid0) = 3592764.091 MLMG: Final Iter. 12 resid, resid/bnorm = 1.429553185e-05, 3.978978716e-12 MLMG: Timers: Solve = 0.985990229 Iter = 0.971409308 Bottom = 0.004373262 Done calling nodal solver Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.30618125 seconds MAC Proj :0.238964959 seconds Nodal Proj :1.035542307 seconds Reactions :0.059972695 seconds Misc :0.032564341 seconds Base State :0.016254215 seconds Time to advance time step: 1.6735356 Call to estdt for level 0 gives dt_lev = 0.2267160049 Call to estdt for level 1 gives dt_lev = 0.1571430828 Minimum estdt over all levels = 0.1571430828 Call to estdt at beginning of step 2 gives dt =0.1571430828 dt_growth factor limits the new dt = 0.0003017496696 Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1731083.239 MLMG: Initial residual (resid0) = 1731083.239 MLMG: Final Iter. 7 resid, resid/bnorm = 0.001298080819, 7.498662051e-10 MLMG: Timers: Solve = 0.113428515 Iter = 0.108182077 Bottom = 0.020116175 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1731352.737 MLMG: Initial residual (resid0) = 274.1638344 MLMG: Final Iter. 4 resid, resid/bnorm = 0.0002713104426, 1.567043138e-10 MLMG: Timers: Solve = 0.067152344 Iter = 0.062078534 Bottom = 0.011903603 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5634453.964 MLMG: Initial residual (resid0) = 5634453.964 MLMG: Final Iter. 9 resid, resid/bnorm = 1.721410081e-05, 3.055149784e-12 MLMG: Timers: Solve = 0.745169195 Iter = 0.730587869 Bottom = 0.003884857 Done calling nodal solver Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696 Timing summary: Advection :0.292690183 seconds MAC Proj :0.209165576 seconds Nodal Proj :0.790576815 seconds Reactions :0.053503396 seconds Misc :0.019715654 seconds Base State :0.015361454 seconds Time to advance time step: 1.365930174 Time to regrid: 0.019549703 Call to estdt for level 0 gives dt_lev = 0.2290991491 Call to estdt for level 1 gives dt_lev = 0.1617739636 Minimum estdt over all levels = 0.1617739636 Call to estdt at beginning of step 3 gives dt =0.1617739636 dt_growth factor limits the new dt = 0.0003319246366 Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003319246366 Cell Count: Level 0, 245760 cells Level 1, 86016 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1445747.926 MLMG: Initial residual (resid0) = 1445747.926 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0003632853519, 2.512784874e-10 MLMG: Timers: Solve = 0.122819484 Iter = 0.117794915 Bottom = 0.019595048 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1445771.6 MLMG: Initial residual (resid0) = 169765.8431 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0003552546319, 2.45719747e-10 MLMG: Timers: Solve = 0.121093908 Iter = 0.116101374 Bottom = 0.016960539 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 10821556.21 MLMG: Initial residual (resid0) = 10821556.21 MLMG: Final Iter. 9 resid, resid/bnorm = 1.518242061e-05, 1.402979416e-12 MLMG: Timers: Solve = 0.773661358 Iter = 0.75751775 Bottom = 0.003941659 Done calling nodal solver Timestep 3 ends with TIME = 0.0009079921877 DT = 0.0003319246366 Timing summary: Advection :0.320642671 seconds MAC Proj :0.273554537 seconds Nodal Proj :0.8242164 seconds Reactions :0.057447389 seconds Misc :0.021212924 seconds Base State :0.014431751 seconds Time to advance time step: 1.497371965 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.181066686 Writing checkpoint 3 Writing checkpoint reacting_bubble_2d_chk0000003 Total Time: 11.22174001 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10029 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.04-251-g47882ba850b9) finalized