Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.05-7-gcc04525912bd) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 1 dr of MAESTRO base state = 281250.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 729 radius at r_cutoff 205171875 Maximum HSE Error = 0.500936 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.187302081 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.012935648 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.181635841 Call to firstdt for level 0 gives dt_lev = 0.0004741795922 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922 Call to firstdt for level 1 gives dt_lev = 0.0002743178815 Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815 Minimum firstdt over all levels = 0.0002743178815 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 9701.831933 MLMG: Initial residual (resid0) = 9701.831933 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0003237192967, 3.336682175e-08 MLMG: Timers: Solve = 0.421700835 Iter = 0.409401953 Bottom = 0.00222254 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1641628699 Call to estdt for level 1 gives dt_lev = 0.1158500464 Minimum estdt over all levels = 0.1158500464 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500464 Multiplying dt by init_shrink; dt = 0.1158500464 Ignoring this new dt since it's larger than the previous dt = 0.0002743178815 Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.178807809 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1769558.41 MLMG: Initial residual (resid0) = 1769558.41 MLMG: Final Iter. 7 resid, resid/bnorm = 0.001491435972, 8.428294674e-10 MLMG: Timers: Solve = 0.106195057 Iter = 0.10005588 Bottom = 0.017013046 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1769522.993 MLMG: Initial residual (resid0) = 305775.5832 MLMG: Final Iter. 7 resid, resid/bnorm = 0.0005327507148, 3.010702414e-10 MLMG: Timers: Solve = 0.106695973 Iter = 0.101865577 Bottom = 0.017668526 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.294015887e+10 MLMG: Initial residual (resid0) = 1.294015887e+10 MLMG: Final Iter. 12 resid, resid/bnorm = 0.07883537251, 6.092303294e-12 MLMG: Timers: Solve = 0.982347617 Iter = 0.966472981 Bottom = 0.004326754 Done calling nodal solver Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.289940244 seconds MAC Proj :0.241189412 seconds Nodal Proj :1.031207757 seconds Reactions :0.053882393 seconds Misc :0.032549549 seconds Base State :0.012777559 seconds Time to advance time step: 1.649057664 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.23149639 Writing checkpoint 0 after all initialization Writing checkpoint reacting_bubble_2d_chk0000000 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1443137.627 MLMG: Initial residual (resid0) = 1443137.627 MLMG: Final Iter. 7 resid, resid/bnorm = 0.0009290549674, 6.437743359e-10 MLMG: Timers: Solve = 0.106001705 Iter = 0.100931665 Bottom = 0.017672385 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1446753.932 MLMG: Initial residual (resid0) = 137186.4661 MLMG: Final Iter. 7 resid, resid/bnorm = 0.0002799181134, 1.934801124e-10 MLMG: Timers: Solve = 0.108779325 Iter = 0.10385515 Bottom = 0.017638207 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3596164.415 MLMG: Initial residual (resid0) = 3596164.415 MLMG: Final Iter. 12 resid, resid/bnorm = 2.284922098e-05, 6.353775397e-12 MLMG: Timers: Solve = 0.984320899 Iter = 0.970054519 Bottom = 0.00448065 Done calling nodal solver Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.296631948 seconds MAC Proj :0.241384692 seconds Nodal Proj :1.034736849 seconds Reactions :0.05784786 seconds Misc :0.033200287 seconds Base State :0.014117328 seconds Time to advance time step: 1.664127209 Call to estdt for level 0 gives dt_lev = 0.22674046 Call to estdt for level 1 gives dt_lev = 0.1571657402 Minimum estdt over all levels = 0.1571657402 Call to estdt at beginning of step 2 gives dt =0.1571657402 dt_growth factor limits the new dt = 0.0003017496696 Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1726150.229 MLMG: Initial residual (resid0) = 1726150.229 MLMG: Final Iter. 7 resid, resid/bnorm = 0.001334361497, 7.730274427e-10 MLMG: Timers: Solve = 0.106904278 Iter = 0.101882654 Bottom = 0.018802578 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1726412.474 MLMG: Initial residual (resid0) = 37995.9387 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0002103176296, 1.218235114e-10 MLMG: Timers: Solve = 0.075340927 Iter = 0.070384383 Bottom = 0.011349844 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5630837.081 MLMG: Initial residual (resid0) = 5630837.081 MLMG: Final Iter. 9 resid, resid/bnorm = 1.712527592e-05, 3.04133749e-12 MLMG: Timers: Solve = 0.744739135 Iter = 0.73048942 Bottom = 0.003966997 Done calling nodal solver Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696 Timing summary: Advection :0.278822294 seconds MAC Proj :0.208308964 seconds Nodal Proj :0.790126352 seconds Reactions :0.052356794 seconds Misc :0.017903668 seconds Base State :0.013139499 seconds Time to advance time step: 1.347812765 Time to regrid: 0.018684943 Call to estdt for level 0 gives dt_lev = 0.2290807372 Call to estdt for level 1 gives dt_lev = 0.16176102 Minimum estdt over all levels = 0.16176102 Call to estdt at beginning of step 3 gives dt =0.16176102 dt_growth factor limits the new dt = 0.0003319246366 Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003319246366 Cell Count: Level 0, 245760 cells Level 1, 86016 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1445248.919 MLMG: Initial residual (resid0) = 1445248.919 MLMG: Final Iter. 7 resid, resid/bnorm = 0.0005361171557, 3.709514316e-10 MLMG: Timers: Solve = 0.110491457 Iter = 0.105360629 Bottom = 0.018691817 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1445247.763 MLMG: Initial residual (resid0) = 40805.66615 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0004390328304, 3.037768621e-10 MLMG: Timers: Solve = 0.074836032 Iter = 0.069911283 Bottom = 0.010938034 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 10821952.33 MLMG: Initial residual (resid0) = 10821952.33 MLMG: Final Iter. 9 resid, resid/bnorm = 1.519307261e-05, 1.403912358e-12 MLMG: Timers: Solve = 0.762529616 Iter = 0.74661679 Bottom = 0.00374667 Done calling nodal solver Timestep 3 ends with TIME = 0.0009079921877 DT = 0.0003319246366 Timing summary: Advection :0.296373257 seconds MAC Proj :0.212548354 seconds Nodal Proj :0.810297909 seconds Reactions :0.053971378 seconds Misc :0.021112787 seconds Base State :0.011946861 seconds Time to advance time step: 1.394641427 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.177307468 Writing checkpoint 3 Writing checkpoint reacting_bubble_2d_chk0000003 Total Time: 11.09445707 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10028 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.05-7-gcc04525912bd) finalized