Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.05-7-gcc04525912bd) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-3d_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.666074129 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.063097701 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.63369335 Call to firstdt for level 0 gives dt_lev = 0.0004741795139 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139 Minimum firstdt over all levels = 0.0004741795139 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 2054.812665 MLMG: Initial residual (resid0) = 2054.812665 MLMG: Final Iter. 7 resid, resid/bnorm = 3.67219144e-10, 1.787117387e-13 MLMG: Timers: Solve = 3.386181478 Iter = 3.324675975 Bottom = 0.026478512 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1719927642 Minimum estdt over all levels = 0.1719927642 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642 Multiplying dt by init_shrink; dt = 0.1719927642 Ignoring this new dt since it's larger than the previous dt = 0.0004741795139 Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.634560768 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2728631.974 MLMG: Initial residual (resid0) = 2728631.974 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0002716442104, 9.955326077e-11 MLMG: Timers: Solve = 0.218765391 Iter = 0.214297655 Bottom = 0.164767966 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2728627.802 MLMG: Initial residual (resid0) = 8728.675228 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0002204244956, 8.078217756e-11 MLMG: Timers: Solve = 0.135711333 Iter = 0.133669628 Bottom = 0.102899158 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.15755262e+10 MLMG: Initial residual (resid0) = 1.15755262e+10 MLMG: Final Iter. 7 resid, resid/bnorm = 0.003041982651, 2.627943299e-13 MLMG: Timers: Solve = 3.399838617 Iter = 3.321162448 Bottom = 0.027884253 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.212705718 seconds MAC Proj :0.37232589 seconds Nodal Proj :3.512611858 seconds Reactions :0.174219046 seconds Misc :0.049977211 seconds Base State :0.006050335 seconds Time to advance time step: 4.321986683 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.403970432 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1308380.202 MLMG: Initial residual (resid0) = 1308380.202 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001229542395, 9.397439621e-11 MLMG: Timers: Solve = 0.225612396 Iter = 0.223479243 Bottom = 0.174607274 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1308380.239 MLMG: Initial residual (resid0) = 9.885479166 MLMG: Final Iter. 5 resid, resid/bnorm = 4.754839191e-05, 3.634141703e-11 MLMG: Timers: Solve = 0.149268851 Iter = 0.147272942 Bottom = 0.116596009 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5488883.997 MLMG: Initial residual (resid0) = 5488883.997 MLMG: Final Iter. 7 resid, resid/bnorm = 6.844879074e-06, 1.247043858e-12 MLMG: Timers: Solve = 3.391233513 Iter = 3.322201312 Bottom = 0.027942181 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.197650946 seconds MAC Proj :0.385857738 seconds Nodal Proj :3.495248239 seconds Reactions :0.173245603 seconds Misc :0.040881355 seconds Base State :0.007765978 seconds Time to advance time step: 4.293043413 Call to estdt for level 0 gives dt_lev = 0.2012294727 Minimum estdt over all levels = 0.2012294727 Call to estdt at beginning of step 2 gives dt =0.2012294727 dt_growth factor limits the new dt = 0.0005215974653 Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1426181.411 MLMG: Initial residual (resid0) = 1426181.411 MLMG: Final Iter. 9 resid, resid/bnorm = 1.124156552e-05, 7.882283016e-12 MLMG: Timers: Solve = 0.255901351 Iter = 0.253765801 Bottom = 0.198700454 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1426291.688 MLMG: Initial residual (resid0) = 36463.11019 MLMG: Final Iter. 9 resid, resid/bnorm = 3.24826828e-05, 2.277422149e-11 MLMG: Timers: Solve = 0.22108292 Iter = 0.219075578 Bottom = 0.164360239 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6063485.841 MLMG: Initial residual (resid0) = 6063485.841 MLMG: Final Iter. 8 resid, resid/bnorm = 5.392648918e-05, 8.893644777e-12 MLMG: Timers: Solve = 3.857424505 Iter = 3.788771311 Bottom = 0.031546766 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653 Timing summary: Advection :0.158637534 seconds MAC Proj :0.487964556 seconds Nodal Proj :3.960040084 seconds Reactions :0.165628358 seconds Misc :0.018907337 seconds Base State :0.006719923 seconds Time to advance time step: 4.791335958 Call to estdt for level 0 gives dt_lev = 0.201266633 Minimum estdt over all levels = 0.201266633 Call to estdt at beginning of step 3 gives dt =0.201266633 dt_growth factor limits the new dt = 0.0005737572118 Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1597824.952 MLMG: Initial residual (resid0) = 1597824.952 MLMG: Final Iter. 9 resid, resid/bnorm = 4.17636265e-05, 2.613779841e-11 MLMG: Timers: Solve = 0.229865948 Iter = 0.227740937 Bottom = 0.17287052 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1597946.233 MLMG: Initial residual (resid0) = 56931.55494 MLMG: Final Iter. 9 resid, resid/bnorm = 0.0001005412336, 6.291903414e-11 MLMG: Timers: Solve = 0.250367446 Iter = 0.248364372 Bottom = 0.193610004 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6669975.866 MLMG: Initial residual (resid0) = 6669975.866 MLMG: Final Iter. 8 resid, resid/bnorm = 2.954552348e-05, 4.429629743e-12 MLMG: Timers: Solve = 3.86092797 Iter = 3.791573437 Bottom = 0.034342956 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118 Timing summary: Advection :0.161336424 seconds MAC Proj :0.491195008 seconds Nodal Proj :3.963233368 seconds Reactions :0.165126745 seconds Misc :0.019860279 seconds Base State :0.005735342 seconds Time to advance time step: 4.800914604 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.608391383 Total Time: 29.32649265 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 7977 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.05-7-gcc04525912bd) finalized