Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.05-12-g0dbb88eb0671) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = cutoff densities: low density cutoff (for mapping the model) = 1e-10 buoyancy cutoff density (for zeroing rho - rho_0, centrifugal term) = 5e-10 anelastic cutoff = 1e-10 Maximum HSE Error = 4.547473509e-13 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile RT_pltInitData after InitData Time to write plotfile: 0.061792155 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.004153478 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile RT_pltafter_InitProj after InitProj Time to write plotfile: 0.06053755 Call to firstdt for level 0 gives dt_lev = 0.000608983586 Multiplying dt_lev by init_shrink; dt_lev = 6.08983586e-05 Minimum firstdt over all levels = 6.08983586e-05 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.004089575 Iter = 0 Bottom = 0 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.08660444773 Minimum estdt over all levels = 0.08660444773 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.08660444773 Multiplying dt by init_shrink; dt = 0.008660444773 Ignoring this new dt since it's larger than the previous dt = 6.08983586e-05 Writing plotfile RT_pltafter_DivuIter after final DivuIter Time to write plotfile: 0.055319187 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 6.08983586e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 0.002421164472 MLMG: Initial residual (resid0) = 0.002421164472 MLMG: Final Iter. 9 resid, resid/bnorm = 1.751907711e-13, 7.23580629e-11 MLMG: Timers: Solve = 0.071705399 Iter = 0.069534664 Bottom = 0.01881597 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 0.002421205691 MLMG: Initial residual (resid0) = 2.151449932e-06 MLMG: Final Iter. 7 resid, resid/bnorm = 9.927909279e-14, 4.100398952e-11 MLMG: Timers: Solve = 0.054288051 Iter = 0.052486332 Bottom = 0.013669908 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 58.12657035 MLMG: Initial residual (resid0) = 58.12657035 MLMG: Final Iter. 8 resid, resid/bnorm = 6.700417998e-12, 1.152728943e-13 MLMG: Timers: Solve = 0.277669719 Iter = 0.272040521 Bottom = 0.002015194 Done calling nodal solver Timestep 0 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05 Timing summary: Advection :0.085769913 seconds MAC Proj :0.134817354 seconds Nodal Proj :0.295769417 seconds Reactions :0.00835899 seconds Misc :0.009096211 seconds Base State :0.007259067 seconds Time to advance time step: 0.534025481 Writing plotfile 0 after all initialization Time to write plotfile: 0.059561967 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 6.08983586e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2.394238647e-05 MLMG: Initial residual (resid0) = 2.394238647e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 3.183218784e-16, 1.329532788e-11 MLMG: Timers: Solve = 0.072114334 Iter = 0.069650208 Bottom = 0.019340695 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2.394218844e-05 MLMG: Initial residual (resid0) = 1.928423398e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 6.036515824e-16, 2.521288244e-11 MLMG: Timers: Solve = 0.068785892 Iter = 0.066961653 Bottom = 0.01666375 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003539812449 MLMG: Initial residual (resid0) = 0.003539812449 MLMG: Final Iter. 8 resid, resid/bnorm = 4.045158306e-16, 1.14276063e-13 MLMG: Timers: Solve = 0.275254573 Iter = 0.26879095 Bottom = 0.002228408 Done calling nodal solver Timestep 1 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05 Timing summary: Advection :0.085398874 seconds MAC Proj :0.149147705 seconds Nodal Proj :0.294726764 seconds Reactions :0.008205599 seconds Misc :0.009814297 seconds Base State :0.006443966 seconds Time to advance time step: 0.54743376 Call to estdt for level 0 gives dt_lev = 0.3128878797 Minimum estdt over all levels = 0.3128878797 Call to estdt at beginning of step 2 gives dt =0.3128878797 dt_growth factor limits the new dt = 6.698819446e-05 Timestep 2 starts with TIME = 6.08983586e-05 DT = 6.698819446e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.050043586e-05 MLMG: Initial residual (resid0) = 3.050043586e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 2.617770702e-15, 8.582732112e-11 MLMG: Timers: Solve = 0.077115648 Iter = 0.074613693 Bottom = 0.018804013 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.058937698e-05 MLMG: Initial residual (resid0) = 4.060097538e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 1.074471294e-15, 3.512563511e-11 MLMG: Timers: Solve = 0.069448735 Iter = 0.067620897 Bottom = 0.017262607 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003894011864 MLMG: Initial residual (resid0) = 0.003894011864 MLMG: Final Iter. 8 resid, resid/bnorm = 4.385597788e-16, 1.126241507e-13 MLMG: Timers: Solve = 0.272697812 Iter = 0.268021975 Bottom = 0.002231206 Done calling nodal solver Timestep 2 ends with TIME = 0.0001278865531 DT = 6.698819446e-05 Timing summary: Advection :0.074240293 seconds MAC Proj :0.154635564 seconds Nodal Proj :0.289471152 seconds Reactions :0.007156772 seconds Misc :0.007295437 seconds Base State :0.007454692 seconds Time to advance time step: 0.532942168 Call to estdt for level 0 gives dt_lev = 0.3130343729 Minimum estdt over all levels = 0.3130343729 Call to estdt at beginning of step 3 gives dt =0.3130343729 dt_growth factor limits the new dt = 7.368701391e-05 Timestep 3 starts with TIME = 0.0001278865531 DT = 7.368701391e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.955092472e-05 MLMG: Initial residual (resid0) = 3.955092472e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 3.720066412e-15, 9.405763427e-11 MLMG: Timers: Solve = 0.077631717 Iter = 0.074984483 Bottom = 0.018862086 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.178767627e-05 MLMG: Initial residual (resid0) = 3.270888949e-05 MLMG: Final Iter. 11 resid, resid/resid0 = 4.327414565e-16, 1.323008709e-11 MLMG: Timers: Solve = 0.083843709 Iter = 0.082024584 Bottom = 0.020586592 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004283412997 MLMG: Initial residual (resid0) = 0.004283412997 MLMG: Final Iter. 8 resid, resid/bnorm = 4.889751798e-16, 1.141555064e-13 MLMG: Timers: Solve = 0.274856477 Iter = 0.268621078 Bottom = 0.002220627 Done calling nodal solver Timestep 3 ends with TIME = 0.000201573567 DT = 7.368701391e-05 Timing summary: Advection :0.08177524 seconds MAC Proj :0.170025451 seconds Nodal Proj :0.294309269 seconds Reactions :0.006411948 seconds Misc :0.009767662 seconds Base State :0.009022246 seconds Time to advance time step: 0.562412557 Call to estdt for level 0 gives dt_lev = 0.3130323771 Minimum estdt over all levels = 0.3130323771 Call to estdt at beginning of step 4 gives dt =0.3130323771 dt_growth factor limits the new dt = 8.10557153e-05 Timestep 4 starts with TIME = 0.000201573567 DT = 8.10557153e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 5.58485633e-05 MLMG: Initial residual (resid0) = 5.58485633e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 4.951460795e-15, 8.865869599e-11 MLMG: Timers: Solve = 0.077281049 Iter = 0.07469864 Bottom = 0.0189493 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 5.160706162e-05 MLMG: Initial residual (resid0) = 4.831503646e-05 MLMG: Final Iter. 11 resid, resid/bnorm = 8.017525247e-16, 1.553571351e-11 MLMG: Timers: Solve = 0.083909463 Iter = 0.081992678 Bottom = 0.020600341 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004711754537 MLMG: Initial residual (resid0) = 0.004711754537 MLMG: Final Iter. 8 resid, resid/bnorm = 5.442694906e-16, 1.15513125e-13 MLMG: Timers: Solve = 0.276625022 Iter = 0.272012566 Bottom = 0.002437151 Done calling nodal solver Timestep 4 ends with TIME = 0.0002826292823 DT = 8.10557153e-05 Timing summary: Advection :0.078919316 seconds MAC Proj :0.169301651 seconds Nodal Proj :0.294513166 seconds Reactions :0.00768095 seconds Misc :0.007803504 seconds Base State :0.006364512 seconds Time to advance time step: 0.558381841 Call to estdt for level 0 gives dt_lev = 0.3130323442 Minimum estdt over all levels = 0.3130323442 Call to estdt at beginning of step 5 gives dt =0.3130323442 dt_growth factor limits the new dt = 8.916128683e-05 Timestep 5 starts with TIME = 0.0002826292823 DT = 8.916128683e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 7.377566457e-05 MLMG: Initial residual (resid0) = 7.377566457e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 6.322901793e-15, 8.570443695e-11 MLMG: Timers: Solve = 0.077148572 Iter = 0.074546048 Bottom = 0.018659786 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 7.382811035e-05 MLMG: Initial residual (resid0) = 1.290271156e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 4.824783877e-15, 6.535158294e-11 MLMG: Timers: Solve = 0.068360224 Iter = 0.066531123 Bottom = 0.016310734 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.005182930399 MLMG: Initial residual (resid0) = 0.005182930399 MLMG: Final Iter. 8 resid, resid/bnorm = 6.12357387e-16, 1.181488733e-13 MLMG: Timers: Solve = 0.273758179 Iter = 0.269111606 Bottom = 0.002210098 Done calling nodal solver Timestep 5 ends with TIME = 0.0003717905691 DT = 8.916128683e-05 Timing summary: Advection :0.077341224 seconds MAC Proj :0.153752125 seconds Nodal Proj :0.293807858 seconds Reactions :0.006461908 seconds Misc :0.008252722 seconds Base State :0.008348942 seconds Time to advance time step: 0.539764656 Writing plotfile 5 Time to write plotfile: 0.064392697 Total Time: 3.831772114 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [RT_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10391 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.05-12-g0dbb88eb0671) finalized