Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.05-12-g0dbb88eb0671) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-3d_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.663352792 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.063050833 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.633277186 Call to firstdt for level 0 gives dt_lev = 0.0004741795139 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139 Minimum firstdt over all levels = 0.0004741795139 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 2054.812665 MLMG: Initial residual (resid0) = 2054.812665 MLMG: Final Iter. 7 resid, resid/bnorm = 3.687752326e-10, 1.794690284e-13 MLMG: Timers: Solve = 3.349048991 Iter = 3.288574333 Bottom = 0.026213882 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1719927642 Minimum estdt over all levels = 0.1719927642 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642 Multiplying dt by init_shrink; dt = 0.1719927642 Ignoring this new dt since it's larger than the previous dt = 0.0004741795139 Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.623638456 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2728631.974 MLMG: Initial residual (resid0) = 2728631.974 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0002717766911, 9.960181281e-11 MLMG: Timers: Solve = 0.219704321 Iter = 0.214606865 Bottom = 0.165353483 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2728627.802 MLMG: Initial residual (resid0) = 8728.675264 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0002133115777, 7.817540285e-11 MLMG: Timers: Solve = 0.143374145 Iter = 0.141251352 Bottom = 0.110632869 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.15755262e+10 MLMG: Initial residual (resid0) = 1.15755262e+10 MLMG: Final Iter. 7 resid, resid/bnorm = 0.002928853035, 2.530211573e-13 MLMG: Timers: Solve = 3.36577514 Iter = 3.291007191 Bottom = 0.028013717 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.216665548 seconds MAC Proj :0.3816544 seconds Nodal Proj :3.47337095 seconds Reactions :0.175587939 seconds Misc :0.051868047 seconds Base State :0.005868789 seconds Time to advance time step: 4.299272585 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.60969225 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1308380.202 MLMG: Initial residual (resid0) = 1308380.202 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001238710975, 9.467515427e-11 MLMG: Timers: Solve = 0.220740725 Iter = 0.218616453 Bottom = 0.170076638 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1308380.239 MLMG: Initial residual (resid0) = 7.635482249 MLMG: Final Iter. 5 resid, resid/bnorm = 2.311894045e-05, 1.766989424e-11 MLMG: Timers: Solve = 0.152201154 Iter = 0.15019396 Bottom = 0.11967427 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5488883.997 MLMG: Initial residual (resid0) = 5488883.997 MLMG: Final Iter. 7 resid, resid/bnorm = 6.844918909e-06, 1.247051115e-12 MLMG: Timers: Solve = 3.351328451 Iter = 3.283224159 Bottom = 0.027933005 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.191968549 seconds MAC Proj :0.38391745 seconds Nodal Proj :3.450683774 seconds Reactions :0.174971303 seconds Misc :0.040619953 seconds Base State :0.005932328 seconds Time to advance time step: 4.24230261 Call to estdt for level 0 gives dt_lev = 0.2012294727 Minimum estdt over all levels = 0.2012294727 Call to estdt at beginning of step 2 gives dt =0.2012294727 dt_growth factor limits the new dt = 0.0005215974653 Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1426181.41 MLMG: Initial residual (resid0) = 1426181.41 MLMG: Final Iter. 9 resid, resid/bnorm = 1.830278323e-05, 1.283341874e-11 MLMG: Timers: Solve = 0.243655024 Iter = 0.241486677 Bottom = 0.186824117 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1426291.688 MLMG: Initial residual (resid0) = 36463.44575 MLMG: Final Iter. 8 resid, resid/bnorm = 9.224048715e-05, 6.467154506e-11 MLMG: Timers: Solve = 0.199119451 Iter = 0.19704311 Bottom = 0.145221834 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6063485.841 MLMG: Initial residual (resid0) = 6063485.841 MLMG: Final Iter. 8 resid, resid/bnorm = 4.397652557e-05, 7.252680509e-12 MLMG: Timers: Solve = 3.82119315 Iter = 3.753437677 Bottom = 0.030807081 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653 Timing summary: Advection :0.162485053 seconds MAC Proj :0.45396907 seconds Nodal Proj :3.920186556 seconds Reactions :0.165740417 seconds Misc :0.01919763 seconds Base State :0.006685366 seconds Time to advance time step: 4.721722656 Call to estdt for level 0 gives dt_lev = 0.201266633 Minimum estdt over all levels = 0.201266633 Call to estdt at beginning of step 3 gives dt =0.201266633 dt_growth factor limits the new dt = 0.0005737572118 Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1597824.952 MLMG: Initial residual (resid0) = 1597824.952 MLMG: Final Iter. 9 resid, resid/bnorm = 4.732069733e-05, 2.961569555e-11 MLMG: Timers: Solve = 0.221930715 Iter = 0.219864769 Bottom = 0.165588765 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1597946.233 MLMG: Initial residual (resid0) = 56931.55489 MLMG: Final Iter. 9 resid, resid/bnorm = 5.003361399e-05, 3.131119993e-11 MLMG: Timers: Solve = 0.240098164 Iter = 0.238100484 Bottom = 0.183469214 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6669975.866 MLMG: Initial residual (resid0) = 6669975.866 MLMG: Final Iter. 8 resid, resid/bnorm = 2.894555308e-05, 4.339678833e-12 MLMG: Timers: Solve = 3.832218146 Iter = 3.763855671 Bottom = 0.03281686 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118 Timing summary: Advection :0.158643632 seconds MAC Proj :0.473222631 seconds Nodal Proj :3.931575269 seconds Reactions :0.165791564 seconds Misc :0.019902795 seconds Base State :0.005054327 seconds Time to advance time step: 4.749284297 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.606205184 Total Time: 28.31020486 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 7976 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.05-12-g0dbb88eb0671) finalized