Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.05-14-gfc08afe8327f) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 1 dr of MAESTRO base state = 281250.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 729 radius at r_cutoff 205171875 Maximum HSE Error = 0.500936 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.189049276 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.014560284 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.17197938 Call to firstdt for level 0 gives dt_lev = 0.0004741795922 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922 Call to firstdt for level 1 gives dt_lev = 0.0002743178815 Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815 Minimum firstdt over all levels = 0.0002743178815 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 9701.831933 MLMG: Initial residual (resid0) = 9701.831933 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0003237192126, 3.336681308e-08 MLMG: Timers: Solve = 0.417228504 Iter = 0.403578802 Bottom = 0.001811275 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1641628699 Call to estdt for level 1 gives dt_lev = 0.1158500464 Minimum estdt over all levels = 0.1158500464 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500464 Multiplying dt by init_shrink; dt = 0.1158500464 Ignoring this new dt since it's larger than the previous dt = 0.0002743178815 Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.166767277 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1769558.41 MLMG: Initial residual (resid0) = 1769558.41 MLMG: Final Iter. 7 resid, resid/bnorm = 0.001491436, 8.428294828e-10 MLMG: Timers: Solve = 0.103198251 Iter = 0.097102866 Bottom = 0.016685904 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1769522.993 MLMG: Initial residual (resid0) = 305775.5832 MLMG: Final Iter. 7 resid, resid/bnorm = 0.0005327507093, 3.010702383e-10 MLMG: Timers: Solve = 0.106402361 Iter = 0.101601302 Bottom = 0.017615213 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.294015887e+10 MLMG: Initial residual (resid0) = 1.294015887e+10 MLMG: Final Iter. 12 resid, resid/bnorm = 0.07878959626, 6.08876576e-12 MLMG: Timers: Solve = 0.98815048 Iter = 0.971909781 Bottom = 0.005394682 Done calling nodal solver Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.271189573 seconds MAC Proj :0.237587316 seconds Nodal Proj :1.035530012 seconds Reactions :0.052556455 seconds Misc :0.020514903 seconds Base State :0.01147845 seconds Time to advance time step: 1.617676083 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.167145379 Writing checkpoint 0 after all initialization Writing checkpoint reacting_bubble_2d_chk0000000 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1443137.627 MLMG: Initial residual (resid0) = 1443137.627 MLMG: Final Iter. 7 resid, resid/bnorm = 0.0009290549665, 6.437743352e-10 MLMG: Timers: Solve = 0.105002569 Iter = 0.100032002 Bottom = 0.017639554 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1446753.932 MLMG: Initial residual (resid0) = 137186.4661 MLMG: Final Iter. 7 resid, resid/bnorm = 0.0002799181135, 1.934801125e-10 MLMG: Timers: Solve = 0.105844491 Iter = 0.10090486 Bottom = 0.017453369 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3596164.415 MLMG: Initial residual (resid0) = 3596164.415 MLMG: Final Iter. 12 resid, resid/bnorm = 2.285293233e-05, 6.354807427e-12 MLMG: Timers: Solve = 0.982389879 Iter = 0.96828412 Bottom = 0.00444632 Done calling nodal solver Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.282729466 seconds MAC Proj :0.237208092 seconds Nodal Proj :1.030108681 seconds Reactions :0.056068557 seconds Misc :0.018794081 seconds Base State :0.015368433 seconds Time to advance time step: 1.62518802 Call to estdt for level 0 gives dt_lev = 0.22674046 Call to estdt for level 1 gives dt_lev = 0.1571657402 Minimum estdt over all levels = 0.1571657402 Call to estdt at beginning of step 2 gives dt =0.1571657402 dt_growth factor limits the new dt = 0.0003017496696 Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1726149.257 MLMG: Initial residual (resid0) = 1726149.257 MLMG: Final Iter. 7 resid, resid/bnorm = 0.001428133663, 8.273523613e-10 MLMG: Timers: Solve = 0.109269512 Iter = 0.104423976 Bottom = 0.018350884 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1726412.474 MLMG: Initial residual (resid0) = 37828.73018 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0002190582391, 1.268863857e-10 MLMG: Timers: Solve = 0.074397171 Iter = 0.069617763 Bottom = 0.011047022 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5630837.081 MLMG: Initial residual (resid0) = 5630837.081 MLMG: Final Iter. 9 resid, resid/bnorm = 1.712911762e-05, 3.042019752e-12 MLMG: Timers: Solve = 0.740603897 Iter = 0.726462272 Bottom = 0.003439462 Done calling nodal solver Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696 Timing summary: Advection :0.278397412 seconds MAC Proj :0.209814774 seconds Nodal Proj :0.787189393 seconds Reactions :0.052227246 seconds Misc :0.017528087 seconds Base State :0.012511889 seconds Time to advance time step: 1.345460775 Time to regrid: 0.018830343 Call to estdt for level 0 gives dt_lev = 0.2290807372 Call to estdt for level 1 gives dt_lev = 0.16176102 Minimum estdt over all levels = 0.16176102 Call to estdt at beginning of step 3 gives dt =0.16176102 dt_growth factor limits the new dt = 0.0003319246366 Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003319246366 Cell Count: Level 0, 245760 cells Level 1, 86016 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1445248.919 MLMG: Initial residual (resid0) = 1445248.919 MLMG: Final Iter. 7 resid, resid/bnorm = 0.0005361255178, 3.709572176e-10 MLMG: Timers: Solve = 0.106535557 Iter = 0.101482366 Bottom = 0.01847806 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1445247.763 MLMG: Initial residual (resid0) = 40805.66607 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0004390114158, 3.037620448e-10 MLMG: Timers: Solve = 0.074187321 Iter = 0.069386154 Bottom = 0.010920251 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 10821952.33 MLMG: Initial residual (resid0) = 10821952.33 MLMG: Final Iter. 9 resid, resid/bnorm = 1.519324724e-05, 1.403928494e-12 MLMG: Timers: Solve = 0.761813265 Iter = 0.745571815 Bottom = 0.003615118 Done calling nodal solver Timestep 3 ends with TIME = 0.0009079921877 DT = 0.0003319246366 Timing summary: Advection :0.293875961 seconds MAC Proj :0.207554526 seconds Nodal Proj :0.807968045 seconds Reactions :0.053743201 seconds Misc :0.021840785 seconds Base State :0.012668971 seconds Time to advance time step: 1.385274237 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.170984731 Writing checkpoint 3 Writing checkpoint reacting_bubble_2d_chk0000003 Total Time: 11.00937492 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10029 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.05-14-gfc08afe8327f) finalized