Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.05-14-gfc08afe8327f) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-3d_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.643357116 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.071450686 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.592666243 Call to firstdt for level 0 gives dt_lev = 0.0004741795139 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139 Minimum firstdt over all levels = 0.0004741795139 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 2054.812665 MLMG: Initial residual (resid0) = 2054.812665 MLMG: Final Iter. 7 resid, resid/bnorm = 3.679563321e-10, 1.790705004e-13 MLMG: Timers: Solve = 3.340614591 Iter = 3.271692328 Bottom = 0.026683318 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1719927642 Minimum estdt over all levels = 0.1719927642 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642 Multiplying dt by init_shrink; dt = 0.1719927642 Ignoring this new dt since it's larger than the previous dt = 0.0004741795139 Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.611446031 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2728631.974 MLMG: Initial residual (resid0) = 2728631.974 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0002666946966, 9.773934308e-11 MLMG: Timers: Solve = 0.230562358 Iter = 0.22503429 Bottom = 0.174353091 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2728627.802 MLMG: Initial residual (resid0) = 8728.675218 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0002201989992, 8.069953658e-11 MLMG: Timers: Solve = 0.138132029 Iter = 0.136088422 Bottom = 0.104733162 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.15755262e+10 MLMG: Initial residual (resid0) = 1.15755262e+10 MLMG: Final Iter. 7 resid, resid/bnorm = 0.002898335457, 2.503847693e-13 MLMG: Timers: Solve = 3.354999543 Iter = 3.279568919 Bottom = 0.028207396 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.193939941 seconds MAC Proj :0.38785487 seconds Nodal Proj :3.460329853 seconds Reactions :0.167555727 seconds Misc :0.036991731 seconds Base State :0.007525904 seconds Time to advance time step: 4.246787067 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.814638794 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1308380.202 MLMG: Initial residual (resid0) = 1308380.202 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001199415274, 9.16717688e-11 MLMG: Timers: Solve = 0.236876846 Iter = 0.234610545 Bottom = 0.184122762 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1308380.239 MLMG: Initial residual (resid0) = 7.635492538 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0001015978869, 7.765165189e-11 MLMG: Timers: Solve = 0.172874534 Iter = 0.17082784 Bottom = 0.139251453 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5488883.997 MLMG: Initial residual (resid0) = 5488883.997 MLMG: Final Iter. 7 resid, resid/bnorm = 6.844896159e-06, 1.24704697e-12 MLMG: Timers: Solve = 3.351541136 Iter = 3.282390337 Bottom = 0.028000635 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.16524468 seconds MAC Proj :0.421315872 seconds Nodal Proj :3.451585395 seconds Reactions :0.167171548 seconds Misc :0.01988004 seconds Base State :0.006748846 seconds Time to advance time step: 4.225319463 Call to estdt for level 0 gives dt_lev = 0.2012294727 Minimum estdt over all levels = 0.2012294727 Call to estdt at beginning of step 2 gives dt =0.2012294727 dt_growth factor limits the new dt = 0.0005215974653 Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1426181.41 MLMG: Initial residual (resid0) = 1426181.41 MLMG: Final Iter. 9 resid, resid/bnorm = 1.787894717e-05, 1.253623631e-11 MLMG: Timers: Solve = 0.232202191 Iter = 0.230034687 Bottom = 0.17388522 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1426291.688 MLMG: Initial residual (resid0) = 36463.44578 MLMG: Final Iter. 9 resid, resid/bnorm = 4.480550219e-05, 3.141398255e-11 MLMG: Timers: Solve = 0.223455747 Iter = 0.221413927 Bottom = 0.165346207 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6063485.841 MLMG: Initial residual (resid0) = 6063485.841 MLMG: Final Iter. 8 resid, resid/bnorm = 5.519265541e-05, 9.102462983e-12 MLMG: Timers: Solve = 3.791896802 Iter = 3.722844689 Bottom = 0.031732854 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653 Timing summary: Advection :0.167626234 seconds MAC Proj :0.46718004 seconds Nodal Proj :3.894639304 seconds Reactions :0.167669723 seconds Misc :0.019972553 seconds Base State :0.007623292 seconds Time to advance time step: 4.717212313 Call to estdt for level 0 gives dt_lev = 0.201266633 Minimum estdt over all levels = 0.201266633 Call to estdt at beginning of step 3 gives dt =0.201266633 dt_growth factor limits the new dt = 0.0005737572118 Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1597824.952 MLMG: Initial residual (resid0) = 1597824.952 MLMG: Final Iter. 9 resid, resid/bnorm = 4.184000482e-05, 2.618559985e-11 MLMG: Timers: Solve = 0.240348945 Iter = 0.238191217 Bottom = 0.182119373 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1597946.233 MLMG: Initial residual (resid0) = 56931.55495 MLMG: Final Iter. 9 resid, resid/bnorm = 3.457703445e-05, 2.16384217e-11 MLMG: Timers: Solve = 0.224843848 Iter = 0.222783954 Bottom = 0.166732924 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6669975.866 MLMG: Initial residual (resid0) = 6669975.866 MLMG: Final Iter. 8 resid, resid/bnorm = 2.892901001e-05, 4.337198603e-12 MLMG: Timers: Solve = 3.796374455 Iter = 3.727114668 Bottom = 0.032397422 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118 Timing summary: Advection :0.165722992 seconds MAC Proj :0.476920476 seconds Nodal Proj :3.897099923 seconds Reactions :0.168047705 seconds Misc :0.020973226 seconds Base State :0.00566144 seconds Time to advance time step: 4.728888614 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.571810406 Total Time: 28.16727483 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 7977 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.05-14-gfc08afe8327f) finalized