Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.05-15-ga9d1c7649200) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = cutoff densities: low density cutoff (for mapping the model) = 1e-10 buoyancy cutoff density (for zeroing rho - rho_0, centrifugal term) = 5e-10 anelastic cutoff = 1e-10 Maximum HSE Error = 4.547473509e-13 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile RT_pltInitData after InitData Time to write plotfile: 0.061762419 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.005151885 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile RT_pltafter_InitProj after InitProj Time to write plotfile: 0.057662662 Call to firstdt for level 0 gives dt_lev = 0.000608983586 Multiplying dt_lev by init_shrink; dt_lev = 6.08983586e-05 Minimum firstdt over all levels = 6.08983586e-05 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.004833062 Iter = 0 Bottom = 0 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.08660444773 Minimum estdt over all levels = 0.08660444773 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.08660444773 Multiplying dt by init_shrink; dt = 0.008660444773 Ignoring this new dt since it's larger than the previous dt = 6.08983586e-05 Writing plotfile RT_pltafter_DivuIter after final DivuIter Time to write plotfile: 0.055188245 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 6.08983586e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 0.002421164472 MLMG: Initial residual (resid0) = 0.002421164472 MLMG: Final Iter. 9 resid, resid/bnorm = 1.751907827e-13, 7.23580677e-11 MLMG: Timers: Solve = 0.07237733 Iter = 0.070229043 Bottom = 0.019051756 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 0.002421205691 MLMG: Initial residual (resid0) = 2.151449932e-06 MLMG: Final Iter. 7 resid, resid/bnorm = 9.927909573e-14, 4.100399073e-11 MLMG: Timers: Solve = 0.054836688 Iter = 0.052947657 Bottom = 0.013637567 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 58.12657035 MLMG: Initial residual (resid0) = 58.12657035 MLMG: Final Iter. 8 resid, resid/bnorm = 6.579625733e-12, 1.131948039e-13 MLMG: Timers: Solve = 0.279710029 Iter = 0.274282908 Bottom = 0.002473761 Done calling nodal solver Timestep 0 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05 Timing summary: Advection :0.083647889 seconds MAC Proj :0.136602814 seconds Nodal Proj :0.297154285 seconds Reactions :0.006605405 seconds Misc :0.007202297 seconds Base State :0.007329833 seconds Time to advance time step: 0.531341061 Writing plotfile 0 after all initialization Time to write plotfile: 0.057531373 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 6.08983586e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2.394238647e-05 MLMG: Initial residual (resid0) = 2.394238647e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 3.180627601e-16, 1.32845053e-11 MLMG: Timers: Solve = 0.074714482 Iter = 0.072020125 Bottom = 0.019884763 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2.394218844e-05 MLMG: Initial residual (resid0) = 1.928423723e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 6.036513706e-16, 2.521287359e-11 MLMG: Timers: Solve = 0.070895423 Iter = 0.068964936 Bottom = 0.016938389 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003539812449 MLMG: Initial residual (resid0) = 0.003539812449 MLMG: Final Iter. 8 resid, resid/bnorm = 3.98769559e-16, 1.126527365e-13 MLMG: Timers: Solve = 0.276025582 Iter = 0.26997747 Bottom = 0.002528394 Done calling nodal solver Timestep 1 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05 Timing summary: Advection :0.08510656 seconds MAC Proj :0.154424096 seconds Nodal Proj :0.294994823 seconds Reactions :0.006110493 seconds Misc :0.008250019 seconds Base State :0.011247287 seconds Time to advance time step: 0.549009644 Call to estdt for level 0 gives dt_lev = 0.3128878797 Minimum estdt over all levels = 0.3128878797 Call to estdt at beginning of step 2 gives dt =0.3128878797 dt_growth factor limits the new dt = 6.698819446e-05 Timestep 2 starts with TIME = 6.08983586e-05 DT = 6.698819446e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.050043586e-05 MLMG: Initial residual (resid0) = 3.050043586e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 2.61776971e-15, 8.582728857e-11 MLMG: Timers: Solve = 0.079441706 Iter = 0.076797225 Bottom = 0.019066442 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.058937698e-05 MLMG: Initial residual (resid0) = 3.366932436e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 1.074456782e-15, 3.512516069e-11 MLMG: Timers: Solve = 0.071746186 Iter = 0.069836862 Bottom = 0.017806455 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003894011864 MLMG: Initial residual (resid0) = 0.003894011864 MLMG: Final Iter. 8 resid, resid/bnorm = 4.380176777e-16, 1.124849366e-13 MLMG: Timers: Solve = 0.274327582 Iter = 0.269358579 Bottom = 0.002377734 Done calling nodal solver Timestep 2 ends with TIME = 0.0001278865531 DT = 6.698819446e-05 Timing summary: Advection :0.083030016 seconds MAC Proj :0.15966537 seconds Nodal Proj :0.293026904 seconds Reactions :0.007578673 seconds Misc :0.006897816 seconds Base State :0.011429097 seconds Time to advance time step: 0.550338887 Call to estdt for level 0 gives dt_lev = 0.3130343729 Minimum estdt over all levels = 0.3130343729 Call to estdt at beginning of step 3 gives dt =0.3130343729 dt_growth factor limits the new dt = 7.368701391e-05 Timestep 3 starts with TIME = 0.0001278865531 DT = 7.368701391e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.955092472e-05 MLMG: Initial residual (resid0) = 3.955092472e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 3.720068397e-15, 9.405768446e-11 MLMG: Timers: Solve = 0.079788945 Iter = 0.077085882 Bottom = 0.019289737 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.959539494e-05 MLMG: Initial residual (resid0) = 1.25524138e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 9.441715327e-16, 2.384548845e-11 MLMG: Timers: Solve = 0.072878113 Iter = 0.070933329 Bottom = 0.019000399 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004283412997 MLMG: Initial residual (resid0) = 0.004283412997 MLMG: Final Iter. 8 resid, resid/bnorm = 4.76615275e-16, 1.112699792e-13 MLMG: Timers: Solve = 0.276154612 Iter = 0.270354619 Bottom = 0.002607089 Done calling nodal solver Timestep 3 ends with TIME = 0.000201573567 DT = 7.368701391e-05 Timing summary: Advection :0.083107879 seconds MAC Proj :0.161326782 seconds Nodal Proj :0.296199985 seconds Reactions :0.00647037 seconds Misc :0.007504343 seconds Base State :0.010669841 seconds Time to advance time step: 0.554733447 Call to estdt for level 0 gives dt_lev = 0.3130323766 Minimum estdt over all levels = 0.3130323766 Call to estdt at beginning of step 4 gives dt =0.3130323766 dt_growth factor limits the new dt = 8.10557153e-05 Timestep 4 starts with TIME = 0.000201573567 DT = 8.10557153e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 5.584764588e-05 MLMG: Initial residual (resid0) = 5.584764588e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 4.629171958e-15, 8.288929435e-11 MLMG: Timers: Solve = 0.08009528 Iter = 0.077407064 Bottom = 0.019337577 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 5.589656389e-05 MLMG: Initial residual (resid0) = 8.595300418e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 1.488443564e-15, 2.662853422e-11 MLMG: Timers: Solve = 0.072685604 Iter = 0.070742528 Bottom = 0.018769084 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.00471175454 MLMG: Initial residual (resid0) = 0.00471175454 MLMG: Final Iter. 8 resid, resid/bnorm = 5.368969158e-16, 1.139484053e-13 MLMG: Timers: Solve = 0.275306621 Iter = 0.270243649 Bottom = 0.002637932 Done calling nodal solver Timestep 4 ends with TIME = 0.0002826292823 DT = 8.10557153e-05 Timing summary: Advection :0.079078657 seconds MAC Proj :0.161553315 seconds Nodal Proj :0.292828984 seconds Reactions :0.007472923 seconds Misc :0.007247276 seconds Base State :0.009939229 seconds Time to advance time step: 0.548301735 Call to estdt for level 0 gives dt_lev = 0.3130323437 Minimum estdt over all levels = 0.3130323437 Call to estdt at beginning of step 5 gives dt =0.3130323437 dt_growth factor limits the new dt = 8.916128683e-05 Timestep 5 starts with TIME = 0.0002826292823 DT = 8.916128683e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 7.377430082e-05 MLMG: Initial residual (resid0) = 7.377430082e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 5.790843579e-15, 7.849404894e-11 MLMG: Timers: Solve = 0.081036848 Iter = 0.078276136 Bottom = 0.019220481 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 7.382811066e-05 MLMG: Initial residual (resid0) = 4.087867384e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 3.636849461e-15, 4.926103931e-11 MLMG: Timers: Solve = 0.071764527 Iter = 0.069864325 Bottom = 0.01786785 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.005182930403 MLMG: Initial residual (resid0) = 0.005182930403 MLMG: Final Iter. 8 resid, resid/bnorm = 5.94359631e-16, 1.146763674e-13 MLMG: Timers: Solve = 0.278275293 Iter = 0.273452064 Bottom = 0.002620098 Done calling nodal solver Timestep 5 ends with TIME = 0.0003717905691 DT = 8.916128683e-05 Timing summary: Advection :0.080822039 seconds MAC Proj :0.161445819 seconds Nodal Proj :0.29765672 seconds Reactions :0.006366353 seconds Misc :0.00800216 seconds Base State :0.008576819 seconds Time to advance time step: 0.554435878 Writing plotfile 5 Time to write plotfile: 0.082872284 Total Time: 3.85838438 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [RT_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10388 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.05-15-ga9d1c7649200) finalized