Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.05-35-gc11bbc9bec27) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling init_base_state_geometry() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 1 dr of MAESTRO base state = 281250.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 729 radius at r_cutoff 205171875 Maximum HSE Error = 0.500936 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.199717798 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.01460191 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.188251164 Call to firstdt for level 0 gives dt_lev = 0.0004741795922 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922 Call to firstdt for level 1 gives dt_lev = 0.0002743178815 Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815 Minimum firstdt over all levels = 0.0002743178815 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 9701.832847 MLMG: Initial residual (resid0) = 9701.832847 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0003239317954, 3.338872154e-08 MLMG: Timers: Solve = 0.415996752 Iter = 0.40198832 Bottom = 0.001600844 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1641628699 Call to estdt for level 1 gives dt_lev = 0.1158500464 Minimum estdt over all levels = 0.1158500464 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500464 Multiplying dt by init_shrink; dt = 0.1158500464 Ignoring this new dt since it's larger than the previous dt = 0.0002743178815 Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.184691091 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1769558.577 MLMG: Initial residual (resid0) = 1769558.577 MLMG: Final Iter. 7 resid, resid/bnorm = 0.001462543565, 8.265019223e-10 MLMG: Timers: Solve = 0.123973779 Iter = 0.11757784 Bottom = 0.020201169 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1769557.101 MLMG: Initial residual (resid0) = 12562.98283 MLMG: Final Iter. 4 resid, resid/bnorm = 0.0003393774305, 1.917866512e-10 MLMG: Timers: Solve = 0.065530051 Iter = 0.060407382 Bottom = 0.009646809 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.293088755e+10 MLMG: Initial residual (resid0) = 1.293088755e+10 MLMG: Final Iter. 9 resid, resid/bnorm = 0.05363464355, 4.1477929e-12 MLMG: Timers: Solve = 0.742126763 Iter = 0.72672684 Bottom = 0.003903538 Done calling nodal solver Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.310606708 seconds MAC Proj :0.225116012 seconds Nodal Proj :0.79040014 seconds Reactions :0.054032899 seconds Misc :0.023040423 seconds Base State :0.017155813 seconds Time to advance time step: 1.403501137 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.186057576 Writing checkpoint 0 after all initialization Writing checkpoint reacting_bubble_2d_chk0000000 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 484084.2373 MLMG: Initial residual (resid0) = 484084.2373 MLMG: Final Iter. 7 resid, resid/bnorm = 3.840928175e-05, 7.934421077e-11 MLMG: Timers: Solve = 0.11624159 Iter = 0.110874517 Bottom = 0.019636059 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 484084.2267 MLMG: Initial residual (resid0) = 15.74076988 MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002651530628, 5.477415875e-10 MLMG: Timers: Solve = 0.05360763 Iter = 0.048261487 Bottom = 0.008047067 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3547174.999 MLMG: Initial residual (resid0) = 3547174.999 MLMG: Final Iter. 9 resid, resid/bnorm = 1.469813287e-05, 4.143616505e-12 MLMG: Timers: Solve = 0.749306973 Iter = 0.734682722 Bottom = 0.00396124 Done calling nodal solver Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.306254432 seconds MAC Proj :0.198524693 seconds Nodal Proj :0.798930594 seconds Reactions :0.053546535 seconds Misc :0.022231187 seconds Base State :0.017983718 seconds Time to advance time step: 1.379759571 Call to estdt for level 0 gives dt_lev = 0.2285161774 Call to estdt for level 1 gives dt_lev = 0.1613599181 Minimum estdt over all levels = 0.1613599181 Call to estdt at beginning of step 2 gives dt =0.1613599181 dt_growth factor limits the new dt = 0.0003017496696 Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 709087.2089 MLMG: Initial residual (resid0) = 709087.2089 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005366310199, 7.567912849e-10 MLMG: Timers: Solve = 0.098727408 Iter = 0.093539245 Bottom = 0.017013376 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 709086.6231 MLMG: Initial residual (resid0) = 129230.7288 MLMG: Final Iter. 5 resid, resid/bnorm = 9.585510759e-05, 1.35181097e-10 MLMG: Timers: Solve = 0.081401848 Iter = 0.076206655 Bottom = 0.012229701 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3903892.246 MLMG: Initial residual (resid0) = 3903892.246 MLMG: Final Iter. 9 resid, resid/bnorm = 1.624971628e-05, 4.162439754e-12 MLMG: Timers: Solve = 0.740428283 Iter = 0.725808119 Bottom = 0.003929375 Done calling nodal solver Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696 Timing summary: Advection :0.303292428 seconds MAC Proj :0.208915013 seconds Nodal Proj :0.787082507 seconds Reactions :0.053467953 seconds Misc :0.021276501 seconds Base State :0.017009393 seconds Time to advance time step: 1.374307992 Time to regrid: 0.018731221 Call to estdt for level 0 gives dt_lev = 0.2285277611 Call to estdt for level 1 gives dt_lev = 0.161379943 Minimum estdt over all levels = 0.161379943 Call to estdt at beginning of step 3 gives dt =0.161379943 dt_growth factor limits the new dt = 0.0003319246366 Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003319246366 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1070293.273 MLMG: Initial residual (resid0) = 1070293.273 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005794008894, 5.413477818e-10 MLMG: Timers: Solve = 0.099028934 Iter = 0.093630512 Bottom = 0.017005765 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1070292.629 MLMG: Initial residual (resid0) = 47909.95942 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0001436927671, 1.342555888e-10 MLMG: Timers: Solve = 0.080838157 Iter = 0.075657012 Bottom = 0.011610628 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 4294280.635 MLMG: Initial residual (resid0) = 4294280.635 MLMG: Final Iter. 9 resid, resid/bnorm = 1.785159111e-05, 4.157062062e-12 MLMG: Timers: Solve = 0.738974043 Iter = 0.72439321 Bottom = 0.003602329 Done calling nodal solver Timestep 3 ends with TIME = 0.0009079921877 DT = 0.0003319246366 Timing summary: Advection :0.30571494 seconds MAC Proj :0.208484272 seconds Nodal Proj :0.788546285 seconds Reactions :0.053082573 seconds Misc :0.019952581 seconds Base State :0.018785165 seconds Time to advance time step: 1.376060254 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.185490948 Writing checkpoint 3 Writing checkpoint reacting_bubble_2d_chk0000003 Total Time: 10.60074579 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10028 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.05-35-gc11bbc9bec27) finalized