Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.05-44-g780fd94cb750) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Calling set_method_params() Calling BCSetup() Calling BaseStateGeometry::Init() Calling init_base_state_geometry() Calling Init() Calling InitData() initdata model_File = cutoff densities: low density cutoff (for mapping the model) = 1e-10 buoyancy cutoff density (for zeroing rho - rho_0, centrifugal term) = 5e-10 anelastic cutoff = 1e-10 Maximum HSE Error = 4.547473509e-13 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile RT_pltInitData after InitData Time to write plotfile: 0.06674108 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.005310351 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile RT_pltafter_InitProj after InitProj Time to write plotfile: 0.064857562 Call to firstdt for level 0 gives dt_lev = 0.000608983586 Multiplying dt_lev by init_shrink; dt_lev = 6.08983586e-05 Minimum firstdt over all levels = 6.08983586e-05 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.004820424 Iter = 0 Bottom = 0 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.08660444773 Minimum estdt over all levels = 0.08660444773 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.08660444773 Multiplying dt by init_shrink; dt = 0.008660444773 Ignoring this new dt since it's larger than the previous dt = 6.08983586e-05 Writing plotfile RT_pltafter_DivuIter after final DivuIter Time to write plotfile: 0.063017269 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 6.08983586e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 0.002421164472 MLMG: Initial residual (resid0) = 0.002421164472 MLMG: Final Iter. 9 resid, resid/bnorm = 1.751907912e-13, 7.235807118e-11 MLMG: Timers: Solve = 0.076367397 Iter = 0.074111636 Bottom = 0.019940547 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 0.002421205691 MLMG: Initial residual (resid0) = 2.151449932e-06 MLMG: Final Iter. 7 resid, resid/bnorm = 9.927908586e-14, 4.100398666e-11 MLMG: Timers: Solve = 0.058205214 Iter = 0.056257232 Bottom = 0.014304238 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 58.12657035 MLMG: Initial residual (resid0) = 58.12657035 MLMG: Final Iter. 8 resid, resid/bnorm = 6.437517186e-12, 1.107499917e-13 MLMG: Timers: Solve = 0.276863508 Iter = 0.271785727 Bottom = 0.002571437 Done calling nodal solver Timestep 0 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05 Timing summary: Advection :0.104527618 seconds MAC Proj :0.144704365 seconds Nodal Proj :0.304576473 seconds Reactions :0.008360656 seconds Misc :0.018802554 seconds Base State :0.011045977 seconds Time to advance time step: 0.581196947 Writing plotfile 0 after all initialization Time to write plotfile: 0.0654398 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 6.08983586e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2.394238647e-05 MLMG: Initial residual (resid0) = 2.394238647e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 3.181156568e-16, 1.328671464e-11 MLMG: Timers: Solve = 0.077378147 Iter = 0.074549767 Bottom = 0.020462074 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2.394218844e-05 MLMG: Initial residual (resid0) = 1.928423639e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 6.036513706e-16, 2.521287359e-11 MLMG: Timers: Solve = 0.073767541 Iter = 0.071798786 Bottom = 0.017688452 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003539812449 MLMG: Initial residual (resid0) = 0.003539812449 MLMG: Final Iter. 8 resid, resid/bnorm = 4.125389266e-16, 1.165425944e-13 MLMG: Timers: Solve = 0.273502932 Iter = 0.267597661 Bottom = 0.002478226 Done calling nodal solver Timestep 1 ends with TIME = 6.08983586e-05 DT = 6.08983586e-05 Timing summary: Advection :0.095628641 seconds MAC Proj :0.160154893 seconds Nodal Proj :0.293586493 seconds Reactions :0.007208731 seconds Misc :0.011300912 seconds Base State :0.008202338 seconds Time to advance time step: 0.568003096 Call to estdt for level 0 gives dt_lev = 0.3128878797 Minimum estdt over all levels = 0.3128878797 Call to estdt at beginning of step 2 gives dt =0.3128878797 dt_growth factor limits the new dt = 6.698819446e-05 Timestep 2 starts with TIME = 6.08983586e-05 DT = 6.698819446e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.050043586e-05 MLMG: Initial residual (resid0) = 3.050043586e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 2.617769644e-15, 8.58272864e-11 MLMG: Timers: Solve = 0.082153731 Iter = 0.079523805 Bottom = 0.019776221 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.058937698e-05 MLMG: Initial residual (resid0) = 3.366932437e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 1.074456966e-15, 3.512516671e-11 MLMG: Timers: Solve = 0.074320847 Iter = 0.072361114 Bottom = 0.018412828 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003894011864 MLMG: Initial residual (resid0) = 0.003894011864 MLMG: Final Iter. 8 resid, resid/bnorm = 4.33680869e-16, 1.113712244e-13 MLMG: Timers: Solve = 0.272384441 Iter = 0.267651732 Bottom = 0.00234708 Done calling nodal solver Timestep 2 ends with TIME = 0.0001278865531 DT = 6.698819446e-05 Timing summary: Advection :0.121859308 seconds MAC Proj :0.165525332 seconds Nodal Proj :0.292124489 seconds Reactions :0.009053134 seconds Misc :0.02923171 seconds Base State :0.012125572 seconds Time to advance time step: 0.617932962 Call to estdt for level 0 gives dt_lev = 0.3130343729 Minimum estdt over all levels = 0.3130343729 Call to estdt at beginning of step 3 gives dt =0.3130343729 dt_growth factor limits the new dt = 7.368701391e-05 Timestep 3 starts with TIME = 0.0001278865531 DT = 7.368701391e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.955092472e-05 MLMG: Initial residual (resid0) = 3.955092472e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 3.720067921e-15, 9.405767242e-11 MLMG: Timers: Solve = 0.082468279 Iter = 0.079757946 Bottom = 0.019819842 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.959539494e-05 MLMG: Initial residual (resid0) = 1.25524138e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 9.441723797e-16, 2.384550984e-11 MLMG: Timers: Solve = 0.075437839 Iter = 0.073448117 Bottom = 0.019537755 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004283412997 MLMG: Initial residual (resid0) = 0.004283412997 MLMG: Final Iter. 8 resid, resid/bnorm = 4.781331581e-16, 1.116243422e-13 MLMG: Timers: Solve = 0.271931011 Iter = 0.266704211 Bottom = 0.002365634 Done calling nodal solver Timestep 3 ends with TIME = 0.000201573567 DT = 7.368701391e-05 Timing summary: Advection :0.117075493 seconds MAC Proj :0.167176692 seconds Nodal Proj :0.290467611 seconds Reactions :0.00761673 seconds Misc :0.012267163 seconds Base State :0.00905038 seconds Time to advance time step: 0.594726273 Call to estdt for level 0 gives dt_lev = 0.3130323766 Minimum estdt over all levels = 0.3130323766 Call to estdt at beginning of step 4 gives dt =0.3130323766 dt_growth factor limits the new dt = 8.10557153e-05 Timestep 4 starts with TIME = 0.000201573567 DT = 8.10557153e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 5.584764588e-05 MLMG: Initial residual (resid0) = 5.584764588e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 4.62917172e-15, 8.288929009e-11 MLMG: Timers: Solve = 0.082565294 Iter = 0.079695486 Bottom = 0.019891646 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 5.589656389e-05 MLMG: Initial residual (resid0) = 8.595300418e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 2.279306369e-15, 4.077721796e-11 MLMG: Timers: Solve = 0.07406168 Iter = 0.072104163 Bottom = 0.018327274 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.00471175454 MLMG: Initial residual (resid0) = 0.00471175454 MLMG: Final Iter. 8 resid, resid/bnorm = 5.457873736e-16, 1.15835273e-13 MLMG: Timers: Solve = 0.272613253 Iter = 0.266716369 Bottom = 0.002355559 Done calling nodal solver Timestep 4 ends with TIME = 0.0002826292823 DT = 8.10557153e-05 Timing summary: Advection :0.124131705 seconds MAC Proj :0.165586354 seconds Nodal Proj :0.29175397 seconds Reactions :0.008469375 seconds Misc :0.012824921 seconds Base State :0.008645478 seconds Time to advance time step: 0.602888744 Call to estdt for level 0 gives dt_lev = 0.3130323437 Minimum estdt over all levels = 0.3130323437 Call to estdt at beginning of step 5 gives dt =0.3130323437 dt_growth factor limits the new dt = 8.916128683e-05 Timestep 5 starts with TIME = 0.0002826292823 DT = 8.916128683e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 7.377430071e-05 MLMG: Initial residual (resid0) = 7.377430071e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 5.788393907e-15, 7.84608441e-11 MLMG: Timers: Solve = 0.082469121 Iter = 0.079592549 Bottom = 0.01964843 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 4.025182409e-05 MLMG: Initial residual (resid0) = 6.54798693e-05 MLMG: Final Iter. 10 resid, resid/resid0 = 5.977491656e-15, 9.128747079e-11 MLMG: Timers: Solve = 0.082918182 Iter = 0.080946764 Bottom = 0.020961701 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.0051829304 MLMG: Initial residual (resid0) = 0.0051829304 MLMG: Final Iter. 8 resid, resid/bnorm = 5.976122375e-16, 1.153039287e-13 MLMG: Timers: Solve = 0.272233125 Iter = 0.26744508 Bottom = 0.002485581 Done calling nodal solver Timestep 5 ends with TIME = 0.0003717905691 DT = 8.916128683e-05 Timing summary: Advection :0.103608487 seconds MAC Proj :0.174797904 seconds Nodal Proj :0.300949001 seconds Reactions :0.0076784 seconds Misc :0.020111985 seconds Base State :0.013145027 seconds Time to advance time step: 0.60727301 Writing plotfile 5 Time to write plotfile: 0.064157135 Total Time: 4.157291987 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [RT_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 10392 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.05-44-g780fd94cb750) finalized