Initializing CUDA... CUDA initialized with 1 GPU AMReX (20.05-44-g780fd94cb750) initialized Calling Setup() Calling ReadParameters() WARNING: burning_cutoff_density_lo not supplied in the inputs file WARNING: setting burning_cutoff_density_lo = base_cutoff_density reading extern runtime parameters ... ERROR: problem in the namelist Calling VariableSetup() Initializing Helmholtz EOS and using Coulomb corrections. Calling set_method_params() Calling BCSetup() Calling BaseStateGeometry::Init() Calling init_base_state_geometry() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-3d_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.560577969 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.069464612 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.488109527 Call to firstdt for level 0 gives dt_lev = 0.0004741795139 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139 Minimum firstdt over all levels = 0.0004741795139 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 2054.812665 MLMG: Initial residual (resid0) = 2054.812665 MLMG: Final Iter. 7 resid, resid/bnorm = 3.686935202e-10, 1.794292621e-13 MLMG: Timers: Solve = 3.314288781 Iter = 3.246652699 Bottom = 0.026593661 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1719927642 Minimum estdt over all levels = 0.1719927642 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642 Multiplying dt by init_shrink; dt = 0.1719927642 Ignoring this new dt since it's larger than the previous dt = 0.0004741795139 Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.714946233 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2728631.974 MLMG: Initial residual (resid0) = 2728631.974 MLMG: Final Iter. 9 resid, resid/bnorm = 1.942086965e-05, 7.117438275e-12 MLMG: Timers: Solve = 0.261904651 Iter = 0.256795186 Bottom = 0.200635562 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2728627.802 MLMG: Initial residual (resid0) = 8728.675109 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0002725227969, 9.987540134e-11 MLMG: Timers: Solve = 0.144486547 Iter = 0.142435481 Bottom = 0.111467939 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.15755262e+10 MLMG: Initial residual (resid0) = 1.15755262e+10 MLMG: Final Iter. 7 resid, resid/bnorm = 0.00291788578, 2.520737054e-13 MLMG: Timers: Solve = 3.319197381 Iter = 3.246380003 Bottom = 0.028602113 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.195945419 seconds MAC Proj :0.425074532 seconds Nodal Proj :3.424605097 seconds Reactions :0.167517151 seconds Misc :0.035844917 seconds Base State :0.009667403 seconds Time to advance time step: 4.249129521 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.469702914 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1308380.202 MLMG: Initial residual (resid0) = 1308380.202 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001250220375, 9.555482218e-11 MLMG: Timers: Solve = 0.204795897 Iter = 0.202600218 Bottom = 0.15340242 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1308380.239 MLMG: Initial residual (resid0) = 7.635466781 MLMG: Final Iter. 5 resid, resid/bnorm = 2.539352159e-05, 1.940836527e-11 MLMG: Timers: Solve = 0.145794141 Iter = 0.143728809 Bottom = 0.112509199 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5488883.997 MLMG: Initial residual (resid0) = 5488883.997 MLMG: Final Iter. 7 resid, resid/bnorm = 6.845011031e-06, 1.247067898e-12 MLMG: Timers: Solve = 3.314914637 Iter = 3.247444033 Bottom = 0.027333577 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :0.171391377 seconds MAC Proj :0.361686939 seconds Nodal Proj :3.414260247 seconds Reactions :0.167061541 seconds Misc :0.020724889 seconds Base State :0.012942769 seconds Time to advance time step: 4.135282294 Call to estdt for level 0 gives dt_lev = 0.2012294727 Minimum estdt over all levels = 0.2012294727 Call to estdt at beginning of step 2 gives dt =0.2012294727 dt_growth factor limits the new dt = 0.0005215974653 Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1426181.41 MLMG: Initial residual (resid0) = 1426181.41 MLMG: Final Iter. 9 resid, resid/bnorm = 1.618494571e-05, 1.13484481e-11 MLMG: Timers: Solve = 0.248244905 Iter = 0.24605944 Bottom = 0.190464831 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1426291.688 MLMG: Initial residual (resid0) = 36463.44576 MLMG: Final Iter. 9 resid, resid/bnorm = 2.569113915e-05, 1.801254216e-11 MLMG: Timers: Solve = 0.240178754 Iter = 0.238109397 Bottom = 0.182771129 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6063485.841 MLMG: Initial residual (resid0) = 6063485.841 MLMG: Final Iter. 8 resid, resid/bnorm = 5.176858896e-05, 8.537760344e-12 MLMG: Timers: Solve = 3.776696044 Iter = 3.709395065 Bottom = 0.031149167 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653 Timing summary: Advection :0.176803582 seconds MAC Proj :0.499818583 seconds Nodal Proj :3.875470848 seconds Reactions :0.168064975 seconds Misc :0.022572736 seconds Base State :0.011956358 seconds Time to advance time step: 4.742891611 Call to estdt for level 0 gives dt_lev = 0.201266633 Minimum estdt over all levels = 0.201266633 Call to estdt at beginning of step 3 gives dt =0.201266633 dt_growth factor limits the new dt = 0.0005737572118 Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1597824.952 MLMG: Initial residual (resid0) = 1597824.952 MLMG: Final Iter. 9 resid, resid/bnorm = 4.149768879e-05, 2.597136109e-11 MLMG: Timers: Solve = 0.225099301 Iter = 0.222920865 Bottom = 0.167511941 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1597946.233 MLMG: Initial residual (resid0) = 56931.55492 MLMG: Final Iter. 9 resid, resid/bnorm = 0.0001558995363, 9.756244176e-11 MLMG: Timers: Solve = 0.249440494 Iter = 0.247380071 Bottom = 0.192142817 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6669975.866 MLMG: Initial residual (resid0) = 6669975.866 MLMG: Final Iter. 8 resid, resid/bnorm = 3.287523741e-05, 4.928839034e-12 MLMG: Timers: Solve = 3.77283554 Iter = 3.705824396 Bottom = 0.032081865 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118 Timing summary: Advection :0.178995872 seconds MAC Proj :0.485801683 seconds Nodal Proj :3.872400237 seconds Reactions :0.16703417 seconds Misc :0.097575153 seconds Base State :0.012213738 seconds Time to advance time step: 4.801971079 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.472177369 Total Time: 27.61675301 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] Total GPU global memory (MB): 12066 Free GPU global memory (MB): 7977 [The Arena] space allocated (MB): 9049 [The Arena] space used (MB): 0 [The Device Arena] space allocated (MB): 8 [The Device Arena] space used (MB): 0 [The Managed Arena] space allocated (MB): 8 [The Managed Arena] space used (MB): 0 [The Pinned Arena] space allocated (MB): 8 [The Pinned Arena] space used (MB): 0 AMReX (20.05-44-g780fd94cb750) finalized